FC876388

Overview
NameFC876388
Unique NameFC876388
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length665
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876388 vs. ExPASy Swiss-Prot
Match: PER51_ARATH (Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.128e-30
Identity = 77/182 (42.31%), Postives = 104/182 (57.14%), Query Frame = 1
Query:  109 SQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSA-RGFEVVDAMKAALESA--CPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFG 645
            S AQL  DFY  TCPN   I+   +Q           + +RL+FHDCFVNGCD S++   +A+  +  +EK    N + A  GF+ V   K A+++   C   VSCADIL +A+   VNL+GGP + V LGRRDG +++ S     LP P   L+ L   F   GL+ N D++ALSGAHT G
Sbjct:   23 SSAQLRGDFYAGTCPNVEQIVRNAVQKKIQQTFTTIPATLRLYFHDCFVNGCDASVM---IASTNTNKAEKDHEDNLSLAGDGFDTVIKAKEAVDAVPNCRNKVSCADILTMATRDVVNLAGGPQYAVELGRRDGLSSSASSVTGKLPKPTFDLNQLNALFAENGLSPN-DMIALSGAHTLG 200          
BLAST of FC876388 vs. ExPASy Swiss-Prot
Match: PERN_IPOBA (Neutral peroxidase OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.473e-30
Identity = 70/157 (44.59%), Postives = 99/157 (63.06%), Query Frame = 1
Query:  178 VLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGI-VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFG 645
            ++  A  ++ R+ ASLIRLHFHDCFV+GCDG ILL++ AN T    E+ + AN+NS RGF V+D  K   ++ C    VSCAD+LAIA+  +       ++ + LGR+D RTAN + A+  LP PF  L +   +F + G N   ++V L+GAHT G
Sbjct:   79 IVDAAITAETRMGASLIRLHFHDCFVDGCDGGILLNDTANFT---GEQGAPANSNSVRGFSVIDQAKRNAQTKCADTPVSCADVLAIAARDAFRKFTNQTYNITLGRQDARTANLTGANTQLPAPFDNLSIQTAKFADKGFNQR-EMVVLAGAHTVG 231          
BLAST of FC876388 vs. ExPASy Swiss-Prot
Match: PER8_ARATH (Peroxidase 8 OS=Arabidopsis thaliana GN=PER8 PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.473e-30
Identity = 75/177 (42.37%), Postives = 103/177 (58.19%), Query Frame = 1
Query:  115 AQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFG 645
            AQL   FY  TCP A +I+  V+ N ++ +  +TA+L+R+ FHDC V GCD S+L+D     T   SEK S+  N   RGFE++D  K  LE  CP  VSCADI+ IA+  S+ L+GGP + V  GRRDG  +N S  D  L  P  ++      F ++G N +T +  + G HT G
Sbjct:   20 AQLRHGFYEGTCPPAESIVGRVVFNHWDRNRTVTAALLRMQFHDCVVKGCDASLLIDPT---TERPSEK-SVGRNAGVRGFEIIDEAKKELELVCPKTVSCADIVTIATRDSIALAGGPKFKVRTGRRDGLRSNPS--DVKLLGPTVSVATSIKAFKSIGFNVSTMVALIGGGHTVG 190          
BLAST of FC876388 vs. ExPASy Swiss-Prot
Match: PER55_ARATH (Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.473e-30
Identity = 74/182 (40.66%), Postives = 105/182 (57.69%), Query Frame = 1
Query:  103 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSE-KFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFG 645
            + S AQL+ ++Y +TCP+   I+   +   F   +    + +R+ FHDCFV GCD S+ + +   D   D++   S+A +    GF+ V   K A+ES CPG+VSCADILA+A+   V L GGP + V LGRRDG  +  S     LP P   +  L   F + GL+  TD++ALSGAHT G
Sbjct:   26 AESNAQLSENYYASTCPSVELIVKQAVTTKFKQTVTTAPATLRMFFHDCFVEGCDASVFIASENEDAEKDADDNKSLAGD----GFDTVIKAKTAVESQCPGVVSCADILALAARDVVVLVGGPEFKVELGRRDGLVSKASRVTGKLPEPGLDVRGLVQIFASNGLS-LTDMIALSGAHTIG 202          
BLAST of FC876388 vs. ExPASy Swiss-Prot
Match: PER2_MAIZE (Peroxidase 2 OS=Zea mays GN=PER2 PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.473e-30
Identity = 83/189 (43.92%), Postives = 110/189 (58.20%), Query Frame = 1
Query:  100 ESSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIAS-EQSVNLSGGP-SWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRGTVS 660
            ++S    L   +Y  TCP A  I+   ++ A   +    A++IR+ FHDCFV GCD S+LLD      S   EK +  NN S RGFE++DA+K ALE+ACPG+VSCADI+A A+ + S  LS G  S+ +P GR DG  +N S + + L  P   L  L   F   G++   DLV LSGAHT GR   S
Sbjct:   28 QASPYYPLELGYYRYTCPQAEAIVKASMEKAIAQNPGNGAAVIRMLFHDCFVEGCDASVLLD--PTPFSPTPEKLAAPNNPSLRGFELIDAIKDALEAACPGVVSCADIIAFAARDASCFLSQGKVSFDMPSGRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMS-LEDLVVLSGAHTVGRSHCS 213          
BLAST of FC876388 vs. ExPASy Swiss-Prot
Match: PER45_ARATH (Peroxidase 45 OS=Arabidopsis thaliana GN=PER45 PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.924e-30
Identity = 76/183 (41.53%), Postives = 104/183 (56.83%), Query Frame = 1
Query:  103 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESA--CPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFG 645
            S   AQL   FY  +CPN   I+   ++  F        + +RL FHDCFV GCD SI++ + +     D    S+A +    GF+ V   K A++S   C   VSCADILA+A+ + V L+GGPS+ V LGRRDGR + ++     LP P   L+ L G F+  GL+  TD++ALSGAHT G
Sbjct:   21 SCVSAQLRTGFYQNSCPNVETIVRNAVRQKFQQTFVTAPATLRLFFHDCFVRGCDASIMIASPSERDHPDD--MSLAGD----GFDTVVKAKQAVDSNPNCRNKVSCADILALATREVVVLTGGPSYPVELGRRDGRISTKASVQSQLPQPEFNLNQLNGMFSRHGLS-QTDMIALSGAHTIG 196          
BLAST of FC876388 vs. ExPASy Swiss-Prot
Match: PER63_ARATH (Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.287e-30
Identity = 72/180 (40.00%), Postives = 105/180 (58.33%), Query Frame = 1
Query:  106 SSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFG 645
            ++++ LT DFY+ +CP   +II   + N   S     A+ +RL FHDCF NGCD S+L+ + A +T+      +++      GF+VV   K ALE ACP  VSC+DI+A+A    +   GGP + + LGRRD RT+  SL    LP P   +  L  +F++ G +   ++VALSGAHT G
Sbjct:   27 AAESHLTVDFYSKSCPKFLDIIRETITNKQISTPTTAAAALRLFFHDCFPNGCDASVLVSSTAFNTAERDSSINLSLPGD--GFDVVIRAKTALELACPNTVSCSDIIAVAVRDLLVTVGGPYYEISLGRRDSRTSKSSLVSDLLPLPSMQISKLIDQFSSRGFSVQ-EMVALSGAHTIG 203          
BLAST of FC876388 vs. ExPASy Swiss-Prot
Match: PER46_ARATH (Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.287e-30
Identity = 73/180 (40.56%), Postives = 106/180 (58.89%), Query Frame = 1
Query:  106 SSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFG 645
            +S A L+ +FY ++C  A  ++   +++A +SD  I   L+RL FHDCFV GCD S+L+         +S + S   N S  GF V+D  K A+E+ CP  VSCADI+A+A+  +V  +GGP   +P GRRDG+ +  +    N+     TLD +   F++ GL+   DLV LSGAHT G
Sbjct:   24 TSSANLSFNFYASSCSVAEFLVRNTVRSATSSDPTIPGKLLRLFFHDCFVQGCDASVLIQG-------NSTEKSDPGNASLGGFSVIDTAKNAIENLCPATVSCADIVALAARDAVEAAGGPVVEIPTGRRDGKESMAANVRPNIIDTDFTLDQMIDAFSSKGLSIQ-DLVVLSGAHTIG 195          
BLAST of FC876388 vs. ExPASy Swiss-Prot
Match: PER1_SORBI (Cationic peroxidase SPC4 (Fragment) OS=Sorghum bicolor PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 5.598e-30
Identity = 76/187 (40.64%), Postives = 106/187 (56.68%), Query Frame = 1
Query:   97 DESSSQAQLTP----DFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPG-IVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRT-ANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHT 639
            D ++ Q  L P    DFY  +CP A +I+   +Q+A   D+ + A L+RLHFHDCFV GCD S+LLD  A          ++    +A  F+ ++ +   L   C G +VSC+D+LA+A+  SV +SGGPS+ VPLGRRD  + A +      LP P   +  L    + + L D TDLVALSG HT
Sbjct:   29 DGNARQPPLAPGLSFDFYKRSCPKAESIVRSFVQDAVRRDVGLAAGLLRLHFHDCFVQGCDASVLLDGSATGPGEQQAPPNLTLRPTA--FKAINDIHDRLHKECGGTVVSCSDVLALAARDSVVVSGGPSYKVPLGRRDSASFATQQDVLSGLPPPTAAVPALLAVLSKINL-DATDLVALSGGHT 212          
BLAST of FC876388 vs. ExPASy Swiss-Prot
Match: PER16_ARATH (Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=1 SV=2)

HSP 1 Score: 130.568 bits (327), Expect = 7.312e-30
Identity = 78/183 (42.62%), Postives = 103/183 (56.28%), Query Frame = 1
Query:  103 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESA--CPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFG 645
            SS  AQL  +FY  +CPN   I+   ++  F        + +RL FHDCFV GCD SILL + +     D +  S+A +    GF+ V   K AL+    C   VSCADILA+A+   V L+GGP++ V LGRRDGR +  +    +LP P   LD L   F   GL+  TD++ALSGAHT G
Sbjct:   19 SSVFAQLQTNFYRKSCPNVETIVRNAVRQKFQQTFVTAPATLRLFFHDCFVRGCDASILLASPSEKDHPDDK--SLAGD----GFDTVAKAKQALDRDPNCRNKVSCADILALATRDVVVLTGGPNYPVELGRRDGRLSTVASVQHSLPQPSFKLDQLNTMFARHGLS-QTDMIALSGAHTIG 194          
The following BLAST results are available for this feature:
BLAST of FC876388 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER51_ARATH1.128e-3042.31Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=... [more]
PERN_IPOBA1.473e-3044.59Neutral peroxidase OS=Ipomoea batatas PE=1 SV=1[more]
PER8_ARATH1.473e-3042.37Peroxidase 8 OS=Arabidopsis thaliana GN=PER8 PE=2 ... [more]
PER55_ARATH1.473e-3040.66Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=... [more]
PER2_MAIZE1.473e-3043.92Peroxidase 2 OS=Zea mays GN=PER2 PE=2 SV=1[more]
PER45_ARATH1.924e-3041.53Peroxidase 45 OS=Arabidopsis thaliana GN=PER45 PE=... [more]
PER63_ARATH4.287e-3040.00Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=... [more]
PER46_ARATH4.287e-3040.56Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=... [more]
PER1_SORBI5.598e-3040.64Cationic peroxidase SPC4 (Fragment) OS=Sorghum bic... [more]
PER16_ARATH7.312e-3042.62Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC32004B11EF DevOvary1 Citrus clementina cDNA clone C32004B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876388 ID=FC876388; Name=FC876388; organism=Citrus clementina; type=EST; length=665bp
GACTCCTTAGACAACACTCACTAATTTCTCTTCAAAAGGAAAATGTCTCC
TCTTCGTTATCTTCTTGCAGCAGCTGTCCTTTTCGCGTTTGTGCTTGACG
AATCATCATCTCAAGCTCAGCTTACGCCAGATTTTTACAACACCACATGC
CCTAATGCATCAAACATCATTCTGGGTGTTCTTCAGAATGCTTTCAATTC
CGATATCCGAATCACTGCCAGCCTCATCAGGCTTCATTTTCATGACTGCT
TTGTCAACGGCTGTGATGGGTCAATCTTGCTGGACAACGTTGCCAATGAT
ACGAGCATAGACAGCGAGAAATTTTCGATGGCAAATAATAATTCAGCAAG
AGGTTTCGAAGTTGTTGATGCCATGAAAGCAGCCCTTGAGAGTGCCTGTC
CTGGCATTGTTTCCTGTGCTGATATTCTTGCCATTGCTTCTGAACAATCC
GTCAATTTGTCAGGTGGTCCTTCATGGACAGTTCCACTGGGAAGAAGAGA
CGGCAGGACAGCGAACAGGAGCCTTGCAGATCAGAATCTTCCAACACCAT
TTCAGACTCTTGATTTGCTCAAAGGCAGATTTACAAATGTCGGTCTCAAC
GACAATACTGATCTGGTTGCACTCTCCGGCGCTCACACTTTTGGAAGGGG
CACAGTGTCATTTTT
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