FC876388

Overview
NameFC876388
Unique NameFC876388
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length665
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10344 contig Ccv1_Contig10344:1..665. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876388 vs. ExPASy Swiss-Prot
Match: PER31_ARATH (Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.127e-29
Identity = 70/180 (38.89%), Postives = 107/180 (59.44%), Query Frame = 1
Query:  106 SSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFG 645
            ++Q++LT +FY+ TCP   +II   + N   ++    A++IRL FHDCF NGCD S+L+ + A +T+      +++      GF+V+   K ALE ACP  VSC+DI+++A+   +   GGP + V LGRRD RT+  SL    LP P   +  +  +F + G     ++VALSGAH+ G
Sbjct:   16 TAQSRLTTNFYSKTCPRFLDIIRDTITNKQITNPTTAAAVIRLFFHDCFPNGCDASVLISSTAFNTAERDSSINLSLPGD--GFDVIVRAKTALELACPNTVSCSDIISVATRDLLITVGGPYYDVFLGRRDSRTSKSSLLTDLLPLPSTPISKIIQQFESKGFTVQ-EMVALSGAHSIG 192          
BLAST of FC876388 vs. ExPASy Swiss-Prot
Match: PER70_ARATH (Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 3.629e-29
Identity = 72/171 (42.11%), Postives = 102/171 (59.65%), Query Frame = 1
Query:  133 FYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFG 645
            +Y + C N  +I+  V+++ + ++      ++R+HFHDCFV GCD S+LL         +SE+ ++ N  S RGF V++  K  LE ACP  VSCADILA+A+   V+L+GGP W VPLGR DGR +  S  +  LP P  ++ + K RF    LN   DLV L+  HT G
Sbjct:   38 YYGSACWNVESIVRSVVESNYLANPANAPGILRMHFHDCFVQGCDASVLL------AGPNSERTAIPNL-SLRGFNVIEEAKTQLEIACPRTVSCADILALAARDFVHLAGGPWWPVPLGRLDGRISLAS--NVILPGPTDSVAVQKLRFAEKNLN-TQDLVVLAAGHTIG 198          
BLAST of FC876388 vs. ExPASy Swiss-Prot
Match: PER24_ARATH (Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 3.629e-29
Identity = 71/179 (39.66%), Postives = 102/179 (56.98%), Query Frame = 1
Query:  112 QAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLS-GGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFG 645
            + +L  +FY+ +CP A +I+  ++     ++  +   L+R+H+HDCFV GCD S+LLD+VA     + E      N S  GFE++D +K  LE  CP  VSCADIL +A+  +V+     P W V  GR DGR +  + A ++LP+       L+  F    L D  DLVALSGAHT G
Sbjct:   43 EGKLKMNFYHNSCPGAEDIVRQIVWKKVEANRSLAPKLLRVHYHDCFVRGCDASLLLDSVAGKAVSEKE---ARPNLSLSGFEIIDEIKYILEKRCPNTVSCADILTLAARDAVSYEFERPLWNVFTGRVDGRVSLATEAARDLPSAGANFTTLQKLFAESDL-DVVDLVALSGAHTIG 217          
BLAST of FC876388 vs. ExPASy Swiss-Prot
Match: PER60_ARATH (Peroxidase 60 OS=Arabidopsis thaliana GN=PER60 PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 4.739e-29
Identity = 77/184 (41.85%), Postives = 106/184 (57.61%), Query Frame = 1
Query:  118 QLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGG--PSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRGTVSF 663
            QL   FY+  C N  NI+  V+  AF  D  I  ++IRL+FHDCF NGCD S+LLD        +SEK   + N S RG+EV+D +K+A+E  C  +VSCADI+A+A+   V L+ G    + +P GR DG+ ++  L D  LP+P  T+     +F    L+ N D+V L G HT G    SF
Sbjct:   27 QLRLGFYSQNCQNVENIVSKVVGEAFIKDSSIAPAMIRLYFHDCFSNGCDASLLLD------GSNSEK-KASPNLSVRGYEVIDDIKSAVEKECDRVVSCADIIALATRDLVTLASGGKTRYEIPTGRLDGKISSALLVD--LPSPKMTVAETAAKFDQRKLSLN-DMVLLLGGHTIGVTHCSF 200          
BLAST of FC876388 vs. ExPASy Swiss-Prot
Match: PER50_ARATH (Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.801e-28
Identity = 72/183 (39.34%), Postives = 102/183 (55.74%), Query Frame = 1
Query:  109 SQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTS--IDSEKFSMANNNSARGFEVVDAMKAALESA--CPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFG 645
            S AQL  +FY  +CPN   I+   +Q           + +RL+FHDCFVNGCD S+++ +  N+ +     E  S+A +    GF+ V   K AL++   C   VSCADIL +A+   VNL+GGP + V LGR DG ++  +     LP P   ++ L   F   GL+ N D++ALSGAHT G
Sbjct:   23 SSAQLRRNFYAGSCPNVEQIVRNAVQKKVQQTFTTIPATLRLYFHDCFVNGCDASVMIASTNNNKAEKDHEENLSLAGD----GFDTVIKAKEALDAVPNCRNKVSCADILTMATRDVVNLAGGPQYDVELGRLDGLSSTAASVGGKLPHPTDDVNKLTSLFAKNGLSLN-DMIALSGAHTLG 200          
BLAST of FC876388 vs. ExPASy Swiss-Prot
Match: PER35_ARATH (Peroxidase 35 OS=Arabidopsis thaliana GN=PER35 PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.801e-28
Identity = 72/184 (39.13%), Postives = 101/184 (54.89%), Query Frame = 1
Query:  106 SSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDS--EKFSMANNNSARGFEVVDAMKAALES--ACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFG 645
            ++ AQL+  FY+ TCPN   I+   +Q           + +RL FHDCFVNGCD S+++ +   + +     +  S+A +    GF+VV   K AL+S  +C   VSCADIL +A+   V  +GGPS+ V LGR DG  +  S  + NLP P   +D L   FT   L    D++ALS AHT G
Sbjct:   22 TTTAQLSRGFYSKTCPNVEQIVRNAVQKKIKKTFVAVPATLRLFFHDCFVNGCDASVMIQSTPKNKAEKDHPDNISLAGD----GFDVVIQAKKALDSNPSCRNKVSCADILTLATRDVVVAAGGPSYEVELGRFDGLVSTASSVEGNLPGPSDNVDKLNALFTKNKLTQE-DMIALSAAHTLG 200          
BLAST of FC876388 vs. ExPASy Swiss-Prot
Match: PER26_ARATH (Probable peroxidase 26 OS=Arabidopsis thaliana GN=PER26 PE=2 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 6.844e-28
Identity = 73/187 (39.04%), Postives = 107/187 (57.22%), Query Frame = 1
Query:  109 SQAQLTPDFYNT--TCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRGTVSF 663
            S  +LT  +Y    TC NA N +   ++  + +D  I   L+RL + DCFV+GCD S+LL+        +SEK +   N    GF ++D +K  LE  CPG+VSCADIL +A+  +V+L+G PS+ V  GRRDG T+++   D  LP+P  + D     F + GLN   D+  L G+H+ GR   S+
Sbjct:   31 SMQKLTWHYYKVYNTCENAENFVRHQVEIFYKNDKSIAPKLLRLLYSDCFVSGCDASVLLEGP------NSEKMA-PQNRGLGGFVLIDKIKIVLEQRCPGVVSCADILNLATRDAVHLAGAPSYPVFTGRRDGLTSDKQTVD--LPSPSISWDQAMSYFKSRGLN-VLDMATLLGSHSMGRTHCSY 207          
BLAST of FC876388 vs. ExPASy Swiss-Prot
Match: PERA_IPOBA (Anionic peroxidase OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.396e-27
Identity = 70/157 (44.59%), Postives = 98/157 (62.42%), Query Frame = 1
Query:  178 VLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGI-VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFG 645
            V+  A N++ R+ ASLIRL FHDCFV+GCD  +LL++ A  T    E+ +  NNNS RGF V++  K  +++  P + VSCADIL+IA+  S     G ++TV LGR+D RTAN + A+  L  P + L     +F   G N  T++VAL G+HT G
Sbjct:   78 VVVAAINAEARMGASLIRLFFHDCFVDGCDAGLLLNDTATFT---GEQTAAGNNNSVRGFAVIEQAKQNVKTQMPDMSVSCADILSIAARDSFEKFSGSTYTVTLGRKDARTANFTGANTQLVGPNENLTSQLTKFAAKGFN-GTEMVALLGSHTIG 230          
BLAST of FC876388 vs. ExPASy Swiss-Prot
Match: PER19_ARATH (Peroxidase 19 OS=Arabidopsis thaliana GN=PER19 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.436e-27
Identity = 65/176 (36.93%), Postives = 93/176 (52.84%), Query Frame = 1
Query:  118 QLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFG 645
            +L+ D+Y+  CP    ++  V    F        + IRL FHDCFV GCDGSIL++       +   +          GF+ +   KA +ES CP +VSC+DILAIA+   ++L+GGP + V  GR DG+ +       N+P    T+D L   F + GL    +LV LSG+HT G
Sbjct:   41 ELSADYYSKKCPQLETLVGSVTSQRFKEVPISAPATIRLFFHDCFVEGCDGSILIETKKGSKKLAEREAYENKELREEGFDSIIKAKALVESHCPSLVSCSDILAIAARDFIHLAGGPYYQVKKGRWDGKRSTAKNVPPNIPRSNSTVDQLIKLFASKGLTVE-ELVVLSGSHTIG 215          
BLAST of FC876388 vs. ExPASy Swiss-Prot
Match: PER61_ARATH (Probable peroxidase 61 OS=Arabidopsis thaliana GN=PER61 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 5.794e-27
Identity = 70/173 (40.46%), Postives = 99/173 (57.23%), Query Frame = 1
Query:  145 TCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRGTVSF 663
            TC +A   I   ++  + +D  I   L+RL + DC VNGCDGSILL         +SE+ +   N    GF ++D +K  LES CPG+VSCADIL +A+  +V+++G PS+ V  GRRDG T N    D  LP+P  ++D     F + GL D  D+  L GAH+ G+   S+
Sbjct:   45 TCDDAETYIRYQVEKFYKNDSSIAPKLLRLLYSDCMVNGCDGSILLQGP------NSER-TAPQNRGLGGFVIIDKIKQVLESRCPGVVSCADILNLATRDAVHMAGAPSYPVFTGRRDGGTLNADAVD--LPSPSISVDESLAYFKSKGL-DVLDMTTLLGAHSMGKTHCSY 207          
The following BLAST results are available for this feature:
BLAST of FC876388 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER31_ARATH2.127e-2938.89Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=... [more]
PER70_ARATH3.629e-2942.11Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=... [more]
PER24_ARATH3.629e-2939.66Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=... [more]
PER60_ARATH4.739e-2941.85Peroxidase 60 OS=Arabidopsis thaliana GN=PER60 PE=... [more]
PER50_ARATH1.801e-2839.34Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=... [more]
PER35_ARATH1.801e-2839.13Peroxidase 35 OS=Arabidopsis thaliana GN=PER35 PE=... [more]
PER26_ARATH6.844e-2839.04Probable peroxidase 26 OS=Arabidopsis thaliana GN=... [more]
PERA_IPOBA3.396e-2744.59Anionic peroxidase OS=Ipomoea batatas PE=1 SV=1[more]
PER19_ARATH4.436e-2736.93Peroxidase 19 OS=Arabidopsis thaliana GN=PER19 PE=... [more]
PER61_ARATH5.794e-2740.46Probable peroxidase 61 OS=Arabidopsis thaliana GN=... [more]

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Properties
Property NameValue
Genbank descriptionC32004B11EF DevOvary1 Citrus clementina cDNA clone C32004B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876388 ID=FC876388; Name=FC876388; organism=Citrus clementina; type=EST; length=665bp
GACTCCTTAGACAACACTCACTAATTTCTCTTCAAAAGGAAAATGTCTCC
TCTTCGTTATCTTCTTGCAGCAGCTGTCCTTTTCGCGTTTGTGCTTGACG
AATCATCATCTCAAGCTCAGCTTACGCCAGATTTTTACAACACCACATGC
CCTAATGCATCAAACATCATTCTGGGTGTTCTTCAGAATGCTTTCAATTC
CGATATCCGAATCACTGCCAGCCTCATCAGGCTTCATTTTCATGACTGCT
TTGTCAACGGCTGTGATGGGTCAATCTTGCTGGACAACGTTGCCAATGAT
ACGAGCATAGACAGCGAGAAATTTTCGATGGCAAATAATAATTCAGCAAG
AGGTTTCGAAGTTGTTGATGCCATGAAAGCAGCCCTTGAGAGTGCCTGTC
CTGGCATTGTTTCCTGTGCTGATATTCTTGCCATTGCTTCTGAACAATCC
GTCAATTTGTCAGGTGGTCCTTCATGGACAGTTCCACTGGGAAGAAGAGA
CGGCAGGACAGCGAACAGGAGCCTTGCAGATCAGAATCTTCCAACACCAT
TTCAGACTCTTGATTTGCTCAAAGGCAGATTTACAAATGTCGGTCTCAAC
GACAATACTGATCTGGTTGCACTCTCCGGCGCTCACACTTTTGGAAGGGG
CACAGTGTCATTTTT
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