FC876391

Overview
NameFC876391
Unique NameFC876391
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length677
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10346 contig Ccv1_Contig10346:1..677. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876391 vs. ExPASy Swiss-Prot
Match: PGIP1_ARATH (Polygalacturonase inhibitor 1 OS=Arabidopsis thaliana GN=PGIP1 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.466e-14
Identity = 58/189 (30.69%), Postives = 85/189 (44.97%), Query Frame = 1
Query:  109 TAQLLLIFL---AXXXXXXNCCPPSERAALLAFKAALHEPYLGIFNSWTGNDCCHNWYGVSCDQET--HRVADINL-RGESEDPIFQRAHRTGYM-----------TGYISPAVCKLTRLSSLTLADWKGITGEIPRCISSIPFLRILDLIGNKLSGDIPRDIGRLHRLAVLNIADNNISGAIPPSIAN 624
            TA L L+FL          + C  +++  LL  K +L+ PY     SW     C +WY + C   T  HRV  + +  G+    I        Y+           TG I P + KL  L  L L+ W  +TG IP  IS +  L  L+L  N LSG IP  +  L ++  L ++ N ++G+IP S  +
Sbjct:    4 TATLCLLFLFTFLTTCLSKDLCNQNDKNTLLKIKKSLNNPYH--LASWDPQTDCCSWYCLECGDATVNHRVTALTIFSGQISGQIPAEVGDLPYLETLVFRKLSNLTGTIQPTIAKLKNLRMLRLS-WTNLTGPIPDFISQLKNLEFLELSFNDLSGSIPSSLSTLPKILALELSRNKLTGSIPESFGS 189          
BLAST of FC876391 vs. ExPASy Swiss-Prot
Match: HSL1_ARATH (Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana GN=HSL1 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.833e-14
Identity = 57/168 (33.93%), Postives = 79/168 (47.02%), Query Frame = 1
Query:  199 KAALHEP--YLGIFNSWTGNDCCHNWYGVSCDQETHRVADI-----NLRGESEDPIFQR---AHRTGYMTGYISPAVCKLTRLSSLTLADWKG--ITGEIPRCISSIPFLRILDLIGNKLSGDIPRDIGRLHRLAVLNIADNNISGAIPPSIANLSSLMHLDLRNTEF 666
            K +L +P  YL  +NS   + C   W GVSC  +   V  +     NL G     I +    AH + Y     S     +    SL   D     +TGE+P+ ++ IP L  LDL GN  SGDIP   G+   L VL++  N + G IPP + N+S+L  L+L    F
Sbjct:   27 KLSLDDPDSYLSSWNSNDASPC--RWSGVSCAGDFSSVTSVDLSSANLAGPFPSVICRLSNLAHLSLYNNSINSTLPLNIAACKSLQTLDLSQNLLTGELPQTLADIPTLVHLDLTGNNFSGDIPASFGKFENLEVLSLVYNLLDGTIPPFLGNISTLKMLNLSYNPF 192          
BLAST of FC876391 vs. ExPASy Swiss-Prot
Match: RPK2_ARATH (LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana GN=RPK2 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.618e-14
Identity = 60/200 (30.00%), Postives = 89/200 (44.50%), Query Frame = 1
Query:  121 LLIFLAXXXXXXNCCPPSERAALLAFKAALHEPYLGIFNSWT--GNDCCHNWYGVSCDQETHRVADINLRGESEDPIFQRAHRTG---------------------YMTGYISPAVCKLTRLSSLTLADWKGITGEIPRCISSIPFLRILDLIGNKLSGDIPRDIGRLHRLAVLNIADNNISGAIPPSIANLSSLMHLDL 651
            LL F +           S+++ LL FK  + +P   I  SW     D C +W+GVSCD  + RV  +N+ G     I +     G                      + G +   +  LT L  L+L  +   +GEIP  I  +  L +LDL GN ++G +P     L  L V+N+  N +SG IP S+ NL+ L  L+L
Sbjct:   28 LLCFASCLAGKITVLADSDKSVLLRFKKTVSDPG-SILASWVEESEDYC-SWFGVSCDSSS-RVMALNISGSGSSEISRNRFTCGDIGKFPLYGFGVRRDCTGNHGALAGNLPSVIMSLTGLRVLSLP-FNSFSGEIPVGIWGMEKLEVLDLEGNLMTGSLPDQFTGLRNLRVMNLGFNRVSGEIPNSLQNLTKLEILNL 223          
BLAST of FC876391 vs. ExPASy Swiss-Prot
Match: PGIP2_PHAVU (Polygalacturonase inhibitor 2 OS=Phaseolus vulgaris GN=PGIP2 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.618e-14
Identity = 63/191 (32.98%), Postives = 86/191 (45.03%), Query Frame = 1
Query:  118 LLLIFLAXXXXXXNCCPPSERAALLAFKAALHEPYLGIFNSWTGN-DCCHN-WYGVSCDQET--HRVADINLRG---ESEDPIFQRAHRTGYMT-----------GYISPAVCKLTRLSSLTLADWKGITGEIPRCISSIPFLRILDLIGNKLSGDIPRDIGRLHRLAVLNIADNNISGAIPPSIANLSSL 636
            +L+I ++        C P ++ ALL  K  L  P     +SW    DCC+  W GV CD +T  +RV +++L G       PI        Y+            G I PA+ KLT+L  L +     ++G IP  +S I  L  LD   N LSG +P  I  L  L  +    N ISGAIP S  + S L
Sbjct:   17 ILVILVSLSTAHSELCNPQDKQALLQIKKDLGNPTT--LSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITH-TNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKL 204          
BLAST of FC876391 vs. ExPASy Swiss-Prot
Match: Y5374_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana GN=At5g37450 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 9.949e-14
Identity = 52/168 (30.95%), Postives = 81/168 (48.21%), Query Frame = 1
Query:  169 PSERAALLAFKAALHEPYLGIFNSWTGND-CCHNWYGVSCDQETH----RVADINLRGESEDPIFQRAHRTGYMTGYISPAVCKLTRLSSLTLADWKGITGEIPRCISSIPFLRILDLIGNKLSGDIPRDIGRLHRLAVLNIADNNISGAIPPSIANLSSLMHLDLRN 657
            P++ +AL      L +P L     W   D C  NW GV C  +       V ++ L   +             +TG ++P +  L+ L+ L    W  +TG+IP  + ++  L  L L GN+L+G +P+++G L  L +L I  N ISG +P S+ANL  L H  + N
Sbjct:   30 PTDVSALQYVHRKLKDP-LNHLQDWKKTDPCASNWTGVICIPDPSDGFLHVKELRLLNMN-------------LTGQLAPELGLLSNLTILNFM-WNDLTGQIPPELGNLTHLIFLLLSGNQLTGSLPQELGSLSNLLILQIDYNEISGKLPTSLANLKKLKHFHMNN 182          
BLAST of FC876391 vs. ExPASy Swiss-Prot
Match: Y1634_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g63430 OS=Arabidopsis thaliana GN=At1g63430 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.299e-13
Identity = 50/163 (30.67%), Postives = 83/163 (50.92%), Query Frame = 1
Query:  172 SERAALLAFKAALHEPYLGIFNSWT--GNDCCHNWYGVSCDQETHRVADINLRGESEDPIFQRAHRTGYMTGYISPAVCKLTRLSSLTLADWKGITGEIPRCISSIPFLRILDLIGNKLSGDIPRDIGRLHRLAVLNIADNNISGAIPPSIANLSSL--MHLD 648
            +E  AL  FK A++E  L + ++W    +D C +W G+ C      V  IN+   S             + G+++P + ++T L  L L     + G IP+ I ++  L+ILDL  N L G IP +IG L  + ++N+  N ++G +P  + NL  L  +H+D
Sbjct:   26 NEVQALRRFKEAIYEDPLLVMSNWNDPNSDPC-DWTGIYCSPSKDHVIKINISASS-------------IKGFLAPELGQITYLQELILHG-NILIGTIPKEIGNLKNLKILDLGNNHLMGPIPAEIGSLSGIMIINLQSNGLTGKLPAELGNLKYLRELHID 173          
BLAST of FC876391 vs. ExPASy Swiss-Prot
Match: Y2239_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.216e-13
Identity = 58/193 (30.05%), Postives = 93/193 (48.19%), Query Frame = 1
Query:   97 VSFYTAQLLLIFLAXXXXXXNCCPPSERAALLAFKAALHEPYLGIFNSWT--GNDCCHNWYGVSCDQETHRVADINLRGESEDPIFQRAHRTGYMTGYISPAVCKLTRLSSLTLADWKGITGEIPRCISSIPFLRILDLIGNKLSGDIPRDIGRLHRLAVLNIADNNISGAIPPSIANLSSLMHLDLRNTEFR 669
            +  ++  LLL F            P E  AL+  K  LH+P+ G+F +W     D C +W  +SC  +      I L   S+            ++G +S ++  LT L  ++L +   I+G+IP  I S+P L+ LDL  N+ SG+IP  + +L  L  L + +N++SG  P S++ +  L  LDL     R
Sbjct:    9 MKIFSVLLLLCFFVTCSLSSEPRNP-EVEALINIKNELHDPH-GVFKNWDEFSVDPC-SWTMISCSSDN---LVIGLGAPSQS-----------LSGTLSGSIGNLTNLRQVSLQN-NNISGKIPPEICSLPKLQTLDLSNNRFSGEIPGSVNQLSNLQYLRLNNNSLSGPFPASLSQIPHLSFLDLSYNNLR 183          
BLAST of FC876391 vs. ExPASy Swiss-Prot
Match: Y4265_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g26540 OS=Arabidopsis thaliana GN=At4g26540 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.437e-12
Identity = 62/187 (33.16%), Postives = 93/187 (49.73%), Query Frame = 1
Query:   97 VSFYTAQLLLIFLAXXXXXXNCCPPSERAALLAFKAALHEPYLGIFNSWTGNDCCH-NWYGVSCDQETHRVADINLRGESEDPIFQRAHRTGYMTGYIS-PAVCKLTRLSSLTLADWKGITGEIPRCISSIPFLRILDLIGNKLSGDIPRDIGRLHRLAVLNIADNNISGAIPPSIANLSSLMHLDL 651
            +SF+++ L   F+             +  ALL++K+ L+      F+SW   D    NW GV C++    V++I L+G               + G +   ++  L  L+SLTL+    +TG IP+ I     L +LDL  N LSGDIP +I RL +L  L++  NN+ G IP  I NLS L+ L L
Sbjct:    8 LSFFSSLLCFFFIPCFSLD------QQGQALLSWKSQLNISG-DAFSSWHVADTSPCNWVGVKCNRRGE-VSEIQLKGMD-------------LQGSLPVTSLRSLKSLTSLTLSSLN-LTGVIPKEIGDFTELELLDLSDNSLSGDIPVEIFRLKKLKTLSLNTNNLEGHIPMEIGNLSGLVELML 172          
BLAST of FC876391 vs. ExPASy Swiss-Prot
Match: Y2267_ARATH (Probable inactive receptor kinase At2g26730 OS=Arabidopsis thaliana GN=At2g26730 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.876e-12
Identity = 54/166 (32.53%), Postives = 82/166 (49.40%), Query Frame = 1
Query:  172 SERAALLAFKAAL-HEPYLGIFNSWTGNDCCHNWYGVSCDQETHRVADINLRGESEDPIFQRAHRTGYMTGYISPAVCKLTRLSSLTLADWKGITGEIPRCISSIPFLRILDLIGNKLSGDIPRDIGRLHRLAVLNIADNNISGAIPPSIANLSSLMHLDLRNTEF 666
            +E+ ALL F   + HE  L     W  +D   NW GV C+     +  + L G            TG +    S ++ +LT L  L+L   + ++G+IP   S++  LR L L  N+ SG+ P    +L+ L  L+I+ NN +G+IP S+ NL+ L  L L N  F
Sbjct:   27 AEKQALLTFLQQIPHENRL----QWNESDSACNWVGVECNSNQSSIHSLRLPG------------TGLVGQIPSGSLGRLTELRVLSLRSNR-LSGQIPSDFSNLTHLRSLYLQHNEFSGEFPTSFTQLNNLIRLDISSNNFTGSIPFSVNNLTHLTGLFLGNNGF 175          
BLAST of FC876391 vs. ExPASy Swiss-Prot
Match: ERL1_ARATH (LRR receptor-like serine/threonine-protein kinase ERL1 OS=Arabidopsis thaliana GN=ERL1 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.451e-12
Identity = 52/163 (31.90%), Postives = 80/163 (49.08%), Query Frame = 1
Query:  172 SERAALLAFKAALHEPYLGIFNSWT---GNDCCHNWYGVSCDQETHRVADINLRGESEDPIFQRAHRTGYMTGYISPAVCKLTRLSSLTLADWKGITGEIPRCISSIPFLRILDLIGNKLSGDIPRDIGRLHRLAVLNIADNNISGAIPPSIANLSSLMHLDL 651
            +E  AL+A K +     + +   W     +D C +W GV CD  ++ V  +NL   +             + G ISPA+  L  L S+ L   K + G+IP  I +   L  LDL  N L GDIP  I +L +L  LN+ +N ++G +P ++  + +L  LDL
Sbjct:   28 NEGKALMAIKGSFSN-LVNMLLDWDDVHNSDLC-SWRGVFCDNVSYSVVSLNLSSLN-------------LGGEISPAIGDLRNLQSIDLQGNK-LAGQIPDEIGNCASLVYLDLSENLLYGDIPFSISKLKQLETLNLKNNQLTGPVPATLTQIPNLKRLDL 174          
The following BLAST results are available for this feature:
BLAST of FC876391 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
PGIP1_ARATH4.466e-1430.69Polygalacturonase inhibitor 1 OS=Arabidopsis thali... [more]
HSL1_ARATH5.833e-1433.93Receptor-like protein kinase HSL1 OS=Arabidopsis t... [more]
RPK2_ARATH7.618e-1430.00LRR receptor-like serine/threonine-protein kinase ... [more]
PGIP2_PHAVU7.618e-1432.98Polygalacturonase inhibitor 2 OS=Phaseolus vulgari... [more]
Y5374_ARATH9.949e-1430.95Probable LRR receptor-like serine/threonine-protei... [more]
Y1634_ARATH1.299e-1330.67Probable LRR receptor-like serine/threonine-protei... [more]
Y2239_ARATH2.216e-1330.05Probable LRR receptor-like serine/threonine-protei... [more]
Y4265_ARATH1.437e-1233.16Probable LRR receptor-like serine/threonine-protei... [more]
Y2267_ARATH1.876e-1232.53Probable inactive receptor kinase At2g26730 OS=Ara... [more]
ERL1_ARATH2.451e-1231.90LRR receptor-like serine/threonine-protein kinase ... [more]

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Properties
Property NameValue
Genbank descriptionC32004C02EF DevOvary1 Citrus clementina cDNA clone C32004C02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876391 ID=FC876391; Name=FC876391; organism=Citrus clementina; type=EST; length=677bp
GCCATGCCCATGCTCAAAACTCAATCCACTTCACTTCCCAACGTAAACCC
AAAACTCATCGTTTCGGATCAAGCAAAAACCAACATGGGTGGCTGTGTCT
CGTTTTACACTGCACAGCTTCTTCTAATCTTCCTCGCCGTTAGTTCTTCC
GTCGTTAACTGCTGCCCGCCGTCAGAGCGGGCAGCACTCTTAGCCTTCAA
AGCTGCCCTCCACGAGCCTTACTTGGGCATCTTCAACTCCTGGACGGGCA
ACGACTGTTGCCACAACTGGTACGGTGTTAGCTGTGACCAGGAAACTCAC
CGGGTCGCTGACATTAACCTACGTGGCGAGTCTGAGGACCCGATATTCCA
GCGGGCCCACCGAACCGGGTACATGACCGGGTATATCTCACCCGCTGTGT
GTAAACTCACGCGTCTCTCCAGTTTAACGCTCGCCGACTGGAAAGGCATC
ACCGGGGAAATCCCACGTTGCATTTCTTCAATTCCTTTTCTCCGCATTCT
TGATTTAATCGGAAATAAGTTATCGGGCGACATTCCCCGAGATATTGGCC
GGCTTCACAGACTCGCTGTCTTAAATATCGCCGATAACAACATATCGGGT
GCGATTCCCCCTTCCATTGCTAATCTTTCCAGCTTGATGCATCTTGACTT
GCGTAACACAGAATTTCGGGCCCGATT
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