FC876403

Overview
NameFC876403
Unique NameFC876403
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length620
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876403 vs. ExPASy Swiss-Prot
Match: HSP76_PIG (Heat shock 70 kDa protein 6 OS=Sus scrofa GN=HSPA6 PE=2 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 3.244e-66
Identity = 122/165 (73.94%), Postives = 143/165 (86.67%), Query Frame = 1
Query:  124 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVTMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 618
            AIGIDLGTTYSCVGV+QH RVEI+ANDQGNRTTPSYV FTDTERL+GDAAK+Q  +NP NTVFDAKRLIGR+F+D +VQ D+K WPF+V++    KP + V+Y+GE+K F  EEISSMVL KM+E AEAYLG  +++AV+TVPAYFNDSQRQATKDAG IAGLNV
Sbjct:    8 AIGIDLGTTYSCVGVFQHGRVEILANDQGNRTTPSYVAFTDTERLVGDAAKSQAALNPQNTVFDAKRLIGRKFADPTVQSDLKHWPFQVVS-EGGKPKVRVSYRGEDKAFYPEEISSMVLSKMKETAEAYLGQPVRHAVITVPAYFNDSQRQATKDAGAIAGLNV 171          
BLAST of FC876403 vs. ExPASy Swiss-Prot
Match: HSP72_CANAL (Heat shock protein SSA2 OS=Candida albicans GN=SSA2 PE=1 SV=3)

HSP 1 Score: 249.595 bits (636), Expect = 9.439e-66
Identity = 126/165 (76.36%), Postives = 140/165 (84.85%), Query Frame = 1
Query:  124 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVTMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 618
            A+GIDLGTTYSCV  + +DRVEIIANDQGNRTTPS+V FTDTERLIGDAAKNQ  MNP NTVFDAKRLIGR+F D  VQGD+K +PFKV+   A KPMI V YKGE K F+ EEISSM+L KM+E AE +LG T+K+AVVTVPAYFNDSQRQATKDAG IAGLNV
Sbjct:    4 AVGIDLGTTYSCVAHFANDRVEIIANDQGNRTTPSFVAFTDTERLIGDAAKNQAAMNPANTVFDAKRLIGRKFDDHEVQGDIKHFPFKVV-DKASKPMIQVEYKGETKTFSPEEISSMILGKMKETAEGFLGTTVKDAVVTVPAYFNDSQRQATKDAGTIAGLNV 167          
BLAST of FC876403 vs. ExPASy Swiss-Prot
Match: HSP76_HUMAN (Heat shock 70 kDa protein 6 OS=Homo sapiens GN=HSPA6 PE=1 SV=2)

HSP 1 Score: 248.825 bits (634), Expect = 1.610e-65
Identity = 122/165 (73.94%), Postives = 141/165 (85.45%), Query Frame = 1
Query:  124 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVTMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 618
            A+GIDLGTTYSCVGV+Q  RVEI+ANDQGNRTTPSYV FTDTERL+GDAAK+Q  +NP NTVFDAKRLIGR+F+D +VQ DMK WPF+V++    KP + V Y+GE+K F  EEISSMVL KM+E AEAYLG  +K+AV+TVPAYFNDSQRQATKDAG IAGLNV
Sbjct:    8 AVGIDLGTTYSCVGVFQQGRVEILANDQGNRTTPSYVAFTDTERLVGDAAKSQAALNPHNTVFDAKRLIGRKFADTTVQSDMKHWPFRVVS-EGGKPKVRVCYRGEDKTFYPEEISSMVLSKMKETAEAYLGQPVKHAVITVPAYFNDSQRQATKDAGAIAGLNV 171          
BLAST of FC876403 vs. ExPASy Swiss-Prot
Match: HSP71_CANAL (Heat shock protein SSA1 OS=Candida albicans GN=SSA1 PE=1 SV=2)

HSP 1 Score: 247.669 bits (631), Expect = 3.587e-65
Identity = 127/165 (76.97%), Postives = 139/165 (84.24%), Query Frame = 1
Query:  124 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVTMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 618
            A+GIDLGTTYSCV  + +DRVEIIANDQGNRTTPS+V FTDTERLIGDAAKNQ  MNP NTVFDAKRLIGR+F D  V  D K +PFKVI   A KP+I V YKGE K F+ EEISSMVL KM+EIAE YLG+T+K+AVVTVPAYFNDSQRQATKDAG IAGLNV
Sbjct:    4 AVGIDLGTTYSCVAHFANDRVEIIANDQGNRTTPSFVAFTDTERLIGDAAKNQAAMNPANTVFDAKRLIGRKFDDPEVINDAKHFPFKVI-DKAGKPVIQVEYKGETKTFSPEEISSMVLTKMKEIAEGYLGSTVKDAVVTVPAYFNDSQRQATKDAGTIAGLNV 167          
BLAST of FC876403 vs. ExPASy Swiss-Prot
Match: HSP70_CERCA (Heat shock protein 70 OS=Ceratitis capitata PE=2 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 4.685e-65
Identity = 124/165 (75.15%), Postives = 137/165 (83.03%), Query Frame = 1
Query:  124 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVTMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 618
            AIGIDLGTTYSC GV+QH +VEIIANDQGNRTTPSYV FTD+ERLIGDAAKNQV MNP NTVFDAKRLIGR++ D  +  D+K WPFKV++    KP I V YK E KQFA EEISSMVL KM+E AE  LG T+ +AV+TVPAYFNDSQRQATKDAG IAGLNV
Sbjct:    3 AIGIDLGTTYSCFGVFQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPKNTVFDAKRLIGRKYDDPKIMEDVKHWPFKVVS-DGGKPKISVEYKEENKQFAPEEISSMVLTKMKETAEVILGTTVTDAVITVPAYFNDSQRQATKDAGRIAGLNV 166          
BLAST of FC876403 vs. ExPASy Swiss-Prot
Match: HSP72_YEAST (Heat shock protein SSA2 OS=Saccharomyces cerevisiae GN=SSA2 PE=1 SV=3)

HSP 1 Score: 243.817 bits (621), Expect = 5.180e-64
Identity = 124/165 (75.15%), Postives = 138/165 (83.64%), Query Frame = 1
Query:  124 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVTMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 618
            A+GIDLGTTYSCV  + +DRV+IIANDQGNRTTPS+VGFTDTERLIGDAAKNQ  MNP NTVFDAKRLIGR F+D  VQGDMK +PFK+I     KP I V +KGE K F  E+ISSMVL KM+E AE+YLGA + +AVVTVPAYFNDSQRQATKDAG IAGLNV
Sbjct:    4 AVGIDLGTTYSCVAHFSNDRVDIIANDQGNRTTPSFVGFTDTERLIGDAAKNQAAMNPANTVFDAKRLIGRNFNDPEVQGDMKHFPFKLI-DVDGKPQIQVEFKGETKNFTPEQISSMVLGKMKETAESYLGAKVNDAVVTVPAYFNDSQRQATKDAGTIAGLNV 167          
BLAST of FC876403 vs. ExPASy Swiss-Prot
Match: HSP70_PLEWA (Heat shock 70 kDa protein OS=Pleurodeles waltlii GN=HSP70 PE=2 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 6.765e-64
Identity = 121/168 (72.02%), Postives = 140/168 (83.33%), Query Frame = 1
Query:  115 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVTMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 618
            +G A GIDLGTTYSCVGV+QH +VEIIAN+QGNRTTPSYV FTDTERLIG  AKNQV++NP NTVFDAKRLIGR+F+D  VQ DMK WPFKV++    KP + V YKG+ K F  +E+SSMVLIKM+EIAEAYLG  + NAV+TVP+Y   SQRQATKDAGV+AGLNV
Sbjct:    5 KGVAFGIDLGTTYSCVGVFQHGKVEIIANNQGNRTTPSYVAFTDTERLIGAPAKNQVSLNPQNTVFDAKRLIGRKFNDTVVQADMKHWPFKVVSDEW-KPKVQVEYKGDNKTFFPDEVSSMVLIKMKEIAEAYLGHLVSNAVITVPSYLTASQRQATKDAGVLAGLNV 171          
BLAST of FC876403 vs. ExPASy Swiss-Prot
Match: HSP70_MIMIV (Heat shock 70 kDa protein homolog OS=Acanthamoeba polyphaga mimivirus GN=HSP70 PE=3 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 3.357e-63
Identity = 118/165 (71.52%), Postives = 138/165 (83.64%), Query Frame = 1
Query:  124 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVTMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 618
            AIGIDLGTT+SCVGVWQ+ +VEIIANDQGNRTTPSYV FT+TE LIGDAAK Q  +NPTNT+FDAKRLIGR F+D SVQ DMK WPFKVI    +KP   V+Y+ E KQ++ E+ISSM+L KM++ A AY+G  + +AV+TVPAYFNDSQRQATKDAG IAGLNV
Sbjct:    6 AIGIDLGTTFSCVGVWQNGKVEIIANDQGNRTTPSYVSFTETEHLIGDAAKYQAAINPTNTIFDAKRLIGRDFNDQSVQSDMKYWPFKVI-NVGNKPYFEVSYQNESKQYSPEQISSMILSKMKQTASAYIGKEVTDAVITVPAYFNDSQRQATKDAGRIAGLNV 169          
BLAST of FC876403 vs. ExPASy Swiss-Prot
Match: HSP77_HUMAN (Putative heat shock 70 kDa protein 7 OS=Homo sapiens GN=HSPA7 PE=5 SV=2)

HSP 1 Score: 240.736 bits (613), Expect = 4.385e-63
Identity = 118/165 (71.52%), Postives = 139/165 (84.24%), Query Frame = 1
Query:  124 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVTMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 618
            A+GIDLGTTYSCVGV+Q  RVEI+ANDQGNRTTPSYV FTDTERL+GDAAK+Q  +NP NTVFDAKRLIGR+F+D +VQ DMK WPF+V++    KP + V Y+GE+K F  EEISSMVL KM+E AEAYLG  +K+AV+TVP YF++SQRQATKDAG IAGL V
Sbjct:    8 AVGIDLGTTYSCVGVFQQGRVEILANDQGNRTTPSYVAFTDTERLVGDAAKSQAALNPHNTVFDAKRLIGRKFADTTVQSDMKHWPFQVVS-EGGKPKVRVCYRGEDKTFYPEEISSMVLSKMKETAEAYLGQPVKHAVITVPTYFSNSQRQATKDAGAIAGLKV 171          
BLAST of FC876403 vs. ExPASy Swiss-Prot
Match: HSP72_PICAN (Heat shock protein 70 2 OS=Pichia angusta GN=HSA2 PE=3 SV=2)

HSP 1 Score: 240.736 bits (613), Expect = 4.385e-63
Identity = 121/165 (73.33%), Postives = 138/165 (83.64%), Query Frame = 1
Query:  124 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVTMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 618
            A+GID GTTYSCV  + +DRVEIIANDQGNRTTPS+V FTDTERL GDAAKNQ  MNP NTVFDAKRLIGR+F D  VQGD+K +PFKV+   + KP I V +KGE K F  EEISSMVL KM+E AE++LG T+K+AV+TVPAYFNDSQRQATKDAG+IAGLNV
Sbjct:    4 AVGIDGGTTYSCVAHFANDRVEIIANDQGNRTTPSFVAFTDTERLSGDAAKNQAAMNPANTVFDAKRLIGRKFDDPEVQGDIKHFPFKVV-DKSGKPQIQVEFKGETKVFTPEEISSMVLTKMKETAESFLGTTVKDAVITVPAYFNDSQRQATKDAGLIAGLNV 167          
The following BLAST results are available for this feature:
BLAST of FC876403 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP76_PIG3.244e-6673.94Heat shock 70 kDa protein 6 OS=Sus scrofa GN=HSPA6... [more]
HSP72_CANAL9.439e-6676.36Heat shock protein SSA2 OS=Candida albicans GN=SSA... [more]
HSP76_HUMAN1.610e-6573.94Heat shock 70 kDa protein 6 OS=Homo sapiens GN=HSP... [more]
HSP71_CANAL3.587e-6576.97Heat shock protein SSA1 OS=Candida albicans GN=SSA... [more]
HSP70_CERCA4.685e-6575.15Heat shock protein 70 OS=Ceratitis capitata PE=2 S... [more]
HSP72_YEAST5.180e-6475.15Heat shock protein SSA2 OS=Saccharomyces cerevisia... [more]
HSP70_PLEWA6.765e-6472.02Heat shock 70 kDa protein OS=Pleurodeles waltlii G... [more]
HSP70_MIMIV3.357e-6371.52Heat shock 70 kDa protein homolog OS=Acanthamoeba ... [more]
HSP77_HUMAN4.385e-6371.52Putative heat shock 70 kDa protein 7 OS=Homo sapie... [more]
HSP72_PICAN4.385e-6373.33Heat shock protein 70 2 OS=Pichia angusta GN=HSA2 ... [more]

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Properties
Property NameValue
Genbank descriptionC32004D02EF DevOvary1 Citrus clementina cDNA clone C32004D02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876403 ID=FC876403; Name=FC876403; organism=Citrus clementina; type=EST; length=620bp
ATCAAGTTTTTTATTTTTTAGATTTGAGATCTATTTTTGTTTTTCTTCGC
TGTCAAAGCAAACTACTTTATTCTCCTTTTCCTTGCTTGAGTTTTGATAA
TGGCCGGAAAAGGAGAGGGACCAGCGATCGGTATCGATTTGGGGACGACG
TACTCCTGCGTCGGAGTCTGGCAGCATGACAGAGTCGAGATTATCGCCAA
TGACCAAGGGAACCGGACGACGCCGTCTTATGTGGGGTTCACCGACACGG
AGCGTTTGATCGGGGACGCTGCTAAGAACCAGGTCACCATGAACCCCACG
AACACCGTCTTTGATGCAAAGAGGTTGATTGGTAGGAGATTCAGCGATGC
ATCAGTCCAAGGCGATATGAAGCTATGGCCATTTAAGGTGATTGCTGGAC
CTGCTGACAAGCCCATGATTGGTGTTAACTACAAGGGCGAAGAGAAGCAG
TTTGCTGCTGAGGAAATCTCGTCTATGGTGCTCATCAAGATGCGTGAGAT
TGCTGAGGCTTACCTTGGCGCAACTATTAAGAATGCAGTCGTTACTGTCC
CTGCTTACTTCAATGACTCACAGAGGCAGGCCACCAAGGATGCCGGTGTC
ATTGCTGGGCTTAATGTGAT
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