FC876403

Overview
NameFC876403
Unique NameFC876403
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length620
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876403 vs. ExPASy Swiss-Prot
Match: HSP74_YEAST (Heat shock protein SSA4 OS=Saccharomyces cerevisiae GN=SSA4 PE=1 SV=3)

HSP 1 Score: 239.965 bits (611), Expect = 7.479e-63
Identity = 122/165 (73.94%), Postives = 134/165 (81.21%), Query Frame = 1
Query:  124 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVTMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 618
            A+GIDLGTTYSCV  + +DRVEIIANDQGNRTTPSYV FTDTERLIGDAAKNQ  MNP NTVFDAKRLIGR+F D  V  D K +PFKVI     KP++ V YKGE K F  EEISSM+L KM+E AE +LG  +K+AVVTVPAYFNDSQRQATKDAG IAGLNV
Sbjct:    4 AVGIDLGTTYSCVAHFANDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQAAMNPHNTVFDAKRLIGRKFDDPEVTNDAKHYPFKVI-DKGGKPVVQVEYKGETKTFTPEEISSMILTKMKETAENFLGTEVKDAVVTVPAYFNDSQRQATKDAGTIAGLNV 167          
BLAST of FC876403 vs. ExPASy Swiss-Prot
Match: HSP73_YEAST (Heat shock protein SSA3 OS=Saccharomyces cerevisiae GN=SSA3 PE=1 SV=3)

HSP 1 Score: 239.195 bits (609), Expect = 1.276e-62
Identity = 122/165 (73.94%), Postives = 135/165 (81.82%), Query Frame = 1
Query:  124 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVTMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 618
            A+GIDLGTTYSCV  + +DRVEIIANDQGNRTTPSYV FTDTERLIGDAAKNQ  +NP NTVFDAKRLIGR+F D  V  D K +PFKVI+    KP++ V YKGE K F  EEISSMVL KM+E AE YLG T+ +AVVTVPAYFNDSQRQATKDAG IAG+NV
Sbjct:    4 AVGIDLGTTYSCVAHFSNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQAAINPHNTVFDAKRLIGRKFDDPEVTTDAKHFPFKVISRDG-KPVVQVEYKGETKTFTPEEISSMVLSKMKETAENYLGTTVNDAVVTVPAYFNDSQRQATKDAGTIAGMNV 167          
BLAST of FC876403 vs. ExPASy Swiss-Prot
Match: HSP71_YEAST (Heat shock protein SSA1 OS=Saccharomyces cerevisiae GN=SSA1 PE=1 SV=4)

HSP 1 Score: 239.195 bits (609), Expect = 1.276e-62
Identity = 122/165 (73.94%), Postives = 137/165 (83.03%), Query Frame = 1
Query:  124 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVTMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 618
            A+GIDLGTTYSCV  + +DRV+IIANDQGNRTTPS+V FTDTERLIGDAAKNQ  MNP+NTVFDAKRLIGR F+D  VQ DMK +PFK+I     KP I V +KGE K F  E+ISSMVL KM+E AE+YLGA + +AVVTVPAYFNDSQRQATKDAG IAGLNV
Sbjct:    4 AVGIDLGTTYSCVAHFANDRVDIIANDQGNRTTPSFVAFTDTERLIGDAAKNQAAMNPSNTVFDAKRLIGRNFNDPEVQADMKHFPFKLI-DVDGKPQIQVEFKGETKNFTPEQISSMVLGKMKETAESYLGAKVNDAVVTVPAYFNDSQRQATKDAGTIAGLNV 167          
BLAST of FC876403 vs. ExPASy Swiss-Prot
Match: HSP71_PICAN (Heat shock protein 70 1 OS=Pichia angusta GN=HSA1 PE=1 SV=2)

HSP 1 Score: 238.424 bits (607), Expect = 2.176e-62
Identity = 120/165 (72.73%), Postives = 136/165 (82.42%), Query Frame = 1
Query:  124 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVTMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 618
            A+GIDLGTTYSCV  + +DRVEIIANDQGNRTTPS+V FTDTERLIGDAAKNQ  MNP NTVFDAKRLIGR+F D  VQ D+K +PFKV+     KP I V +KGE K F  EEISSMVL KM+E AE+Y+G  + +AV+TVPAYFNDSQRQATKDAG+IAGLNV
Sbjct:    4 AVGIDLGTTYSCVAHFVNDRVEIIANDQGNRTTPSFVAFTDTERLIGDAAKNQAAMNPANTVFDAKRLIGRKFDDPEVQNDIKHFPFKVVE-KGGKPHIQVEFKGETKVFTPEEISSMVLTKMKETAESYMGGKVTDAVITVPAYFNDSQRQATKDAGLIAGLNV 167          
BLAST of FC876403 vs. ExPASy Swiss-Prot
Match: HSP7C_CAEEL (Heat shock 70 kDa protein C OS=Caenorhabditis elegans GN=hsp-3 PE=2 SV=2)

HSP 1 Score: 233.417 bits (594), Expect = 7.000e-61
Identity = 117/169 (69.23%), Postives = 140/169 (82.84%), Query Frame = 1
Query:  118 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTE--RLIGDAAKNQVTMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 618
            G  IGIDLGTTYSCVGV+++ RVEIIANDQGNR TPSYV F+  +  RLIGDAAKNQ+T+NP NT+FDAKRLIGR ++D +VQ D+K WPFKVI   ++KP + V    + KQF  EE+S+MVL+KM+EIAE+YLG  +KNAVVTVPAYFND+QRQATKDAG IAGLNV
Sbjct:   33 GTIIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINPENTIFDAKRLIGRDYNDKTVQADIKHWPFKVI-DKSNKPSVEVKVGSDNKQFTPEEVSAMVLVKMKEIAESYLGKEVKNAVVTVPAYFNDAQRQATKDAGTIAGLNV 200          
BLAST of FC876403 vs. ExPASy Swiss-Prot
Match: HSP72_PARLI (Heat shock 70 kDa protein II (Fragment) OS=Paracentrotus lividus GN=HSP70II PE=3 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 1.560e-60
Identity = 118/169 (69.82%), Postives = 139/169 (82.25%), Query Frame = 1
Query:  115 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVTMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLG-ATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 618
            + PA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYV FTDTERLIGDAAKN+   NP  ++ DAKRLIGR FSD +V+ DMK WPF VI     +P I + +KGE K F AEEISSMVL+KM+E AEAYLG  ++ +AVVTVPAYFNDSQRQATK+ GVI+G+N+
Sbjct:    3 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNKTASNPYRSL-DAKRLIGRNFSDTNVKADMKHWPFTVIE-EGGRPKIKIEFKGESKTFYAEEISSMVLLKMKETAEAYLGKESVTDAVVTVPAYFNDSQRQATKECGVISGMNI 169          
BLAST of FC876403 vs. ExPASy Swiss-Prot
Match: HSP71_PARBA (Heat shock 70 kDa protein 1 OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=HSP70-1 PE=1 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 2.660e-60
Identity = 119/166 (71.69%), Postives = 134/166 (80.72%), Query Frame = 1
Query:  121 PAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVTMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 618
            PAIGIDLGTTYSCVG+++ DR+EIIAN+QGNR TPS+V FTDTERLIGDAAKNQV MNP  TVF+AKRLIGR+F+D  VQ DMK +PFK I      P I V ++GE K F  E ISSM   K REIAE+YLG T+ NAVVTVPAYFNDSQRQ TKDAG+IAGLNV
Sbjct:    3 PAIGIDLGTTYSCVGIFRDDRIEIIANEQGNRNTPSFVAFTDTERLIGDAAKNQVAMNP-QTVFEAKRLIGRKFADPEVQADMKHFPFK-ITDKGGNPKIQVEFRGEGKHFTPEGISSMFRRKKREIAESYLGGTVNNAVVTVPAYFNDSQRQVTKDAGLIAGLNV 166          
BLAST of FC876403 vs. ExPASy Swiss-Prot
Match: GRP78_NEUCR (78 kDa glucose-regulated protein homolog OS=Neurospora crassa GN=grp78 PE=3 SV=3)

HSP 1 Score: 231.491 bits (589), Expect = 2.660e-60
Identity = 120/189 (63.49%), Postives = 142/189 (75.13%), Query Frame = 1
Query:   64 YFILLFLA*VLIMAGKGE----GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVTMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 618
            +F LLF A  +  A   +    G  IGIDLGTTYSCVGV Q  +VEI+ NDQGNR TPSYV FTD ERL+GDAAKNQ   NP  T+FD KRLIGR+FSD  VQ D+K +P+KV++   DKP++ V  KGEEK F  EEIS+M+L KM+E AE YLG  + +AVVTVPAYFND+QRQATKDAG+IAGLNV
Sbjct:   17 FFALLFSAGFVQQAHANDTEAMGTVIGIDLGTTYSCVGVMQKGKVEILVNDQGNRITPSYVAFTDEERLVGDAAKNQAAANPHRTIFDIKRLIGRKFSDKDVQNDIKHFPYKVVS-KDDKPVVKVEVKGEEKTFTPEEISAMILGKMKETAEGYLGKKVTHAVVTVPAYFNDNQRQATKDAGMIAGLNV 204          
BLAST of FC876403 vs. ExPASy Swiss-Prot
Match: HSP7C_CAEBR (Heat shock 70 kDa protein C OS=Caenorhabditis briggsae GN=hsp-3 PE=3 SV=2)

HSP 1 Score: 230.72 bits (587), Expect = 4.538e-60
Identity = 115/169 (68.05%), Postives = 140/169 (82.84%), Query Frame = 1
Query:  118 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTE--RLIGDAAKNQVTMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 618
            G  IGIDLGTTYSCVGV+++ RVEIIANDQGNR TPSYV F+  +  RLIGDAAKNQ+T+NP NT+FDAKRLIGR ++D +VQ D+K WPFKV+   ++KP + V    + KQF  EE+S+MVL+KM+EIAE+YLG  +K+AVVTVPAYFND+QRQATKDAG IAGLNV
Sbjct:   33 GTIIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGEQGDRLIGDAAKNQLTINPENTIFDAKRLIGRDYNDKTVQADIKHWPFKVL-DKSNKPSVEVKVGADNKQFTPEEVSAMVLVKMKEIAESYLGKEVKHAVVTVPAYFNDAQRQATKDAGTIAGLNV 200          
BLAST of FC876403 vs. ExPASy Swiss-Prot
Match: GRP78_ECHMU (78 kDa glucose-regulated protein OS=Echinococcus multilocularis GN=GRP78 PE=2 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 5.926e-60
Identity = 125/186 (67.20%), Postives = 144/186 (77.42%), Query Frame = 1
Query:   67 FILLFLA*VLIMAGKGE-GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVTMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 618
            F+L  L      +GK E G  IGIDLGTTYSCVGV+++ RVEIIANDQGNR TPSYV F+ D ERLIGDAAKNQ+T NP NT+FDAKRLIGR + D  VQGD+K +PFKVI    +KP + V    EEK FA EE+S+MVL KM+EIAEAYLG  + +AVVTVPAYFND+QRQATKDAG IAGL V
Sbjct:   10 FLLCILTLSHCKSGKEEYGTVIGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFSGDGERLIGDAAKNQLTSNPKNTLFDAKRLIGRDYDDKDVQGDIKRYPFKVI-NKNNKPYMKVQVGSEEKGFAPEEVSAMVLSKMKEIAEAYLGTEVTHAVVTVPAYFNDAQRQATKDAGAIAGLTV 194          
The following BLAST results are available for this feature:
BLAST of FC876403 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP74_YEAST7.479e-6373.94Heat shock protein SSA4 OS=Saccharomyces cerevisia... [more]
HSP73_YEAST1.276e-6273.94Heat shock protein SSA3 OS=Saccharomyces cerevisia... [more]
HSP71_YEAST1.276e-6273.94Heat shock protein SSA1 OS=Saccharomyces cerevisia... [more]
HSP71_PICAN2.176e-6272.73Heat shock protein 70 1 OS=Pichia angusta GN=HSA1 ... [more]
HSP7C_CAEEL7.000e-6169.23Heat shock 70 kDa protein C OS=Caenorhabditis eleg... [more]
HSP72_PARLI1.560e-6069.82Heat shock 70 kDa protein II (Fragment) OS=Paracen... [more]
HSP71_PARBA2.660e-6071.69Heat shock 70 kDa protein 1 OS=Paracoccidioides br... [more]
GRP78_NEUCR2.660e-6063.4978 kDa glucose-regulated protein homolog OS=Neuros... [more]
HSP7C_CAEBR4.538e-6068.05Heat shock 70 kDa protein C OS=Caenorhabditis brig... [more]
GRP78_ECHMU5.926e-6067.2078 kDa glucose-regulated protein OS=Echinococcus m... [more]

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Properties
Property NameValue
Genbank descriptionC32004D02EF DevOvary1 Citrus clementina cDNA clone C32004D02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876403 ID=FC876403; Name=FC876403; organism=Citrus clementina; type=EST; length=620bp
ATCAAGTTTTTTATTTTTTAGATTTGAGATCTATTTTTGTTTTTCTTCGC
TGTCAAAGCAAACTACTTTATTCTCCTTTTCCTTGCTTGAGTTTTGATAA
TGGCCGGAAAAGGAGAGGGACCAGCGATCGGTATCGATTTGGGGACGACG
TACTCCTGCGTCGGAGTCTGGCAGCATGACAGAGTCGAGATTATCGCCAA
TGACCAAGGGAACCGGACGACGCCGTCTTATGTGGGGTTCACCGACACGG
AGCGTTTGATCGGGGACGCTGCTAAGAACCAGGTCACCATGAACCCCACG
AACACCGTCTTTGATGCAAAGAGGTTGATTGGTAGGAGATTCAGCGATGC
ATCAGTCCAAGGCGATATGAAGCTATGGCCATTTAAGGTGATTGCTGGAC
CTGCTGACAAGCCCATGATTGGTGTTAACTACAAGGGCGAAGAGAAGCAG
TTTGCTGCTGAGGAAATCTCGTCTATGGTGCTCATCAAGATGCGTGAGAT
TGCTGAGGCTTACCTTGGCGCAACTATTAAGAATGCAGTCGTTACTGTCC
CTGCTTACTTCAATGACTCACAGAGGCAGGCCACCAAGGATGCCGGTGTC
ATTGCTGGGCTTAATGTGAT
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