FC876403

Overview
NameFC876403
Unique NameFC876403
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length620
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876403 vs. ExPASy Swiss-Prot
Match: HSP70_ONCTS (Heat shock 70 kDa protein OS=Oncorhynchus tschawytscha GN=hsp70 PE=2 SV=1)

HSP 1 Score: 270.396 bits (690), Expect = 5.168e-72
Identity = 134/168 (79.76%), Postives = 147/168 (87.50%), Query Frame = 1
Query:  115 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVTMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 618
            +GP+IGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYV FTDTERLIGDAAKNQV MNP NTVFDAKRLIGR+F+D  VQ DMK WPFKV++    KP + V+YKGE K F  EEISSMVL+KMREIAEAYLG  + NAV+TVPAYFNDSQRQATKDAGVIAGLNV
Sbjct:    5 KGPSIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTVFDAKRLIGRKFNDQVVQADMKHWPFKVVS-DGGKPKVQVDYKGENKSFNPEEISSMVLVKMREIAEAYLGQKVSNAVITVPAYFNDSQRQATKDAGVIAGLNV 171          
BLAST of FC876403 vs. ExPASy Swiss-Prot
Match: HSP70_ACHKL (Heat shock 70 kDa protein OS=Achlya klebsiana GN=HSP70 PE=2 SV=1)

HSP 1 Score: 270.396 bits (690), Expect = 5.168e-72
Identity = 129/168 (76.79%), Postives = 145/168 (86.31%), Query Frame = 1
Query:  115 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVTMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 618
            +G ++GIDLGTTYSCVGVWQ+DRVEIIANDQGNRTTPSYV FTD+ERLIGDAAKNQV MNP NTVFDAKRLIGR+F+D + Q D+K WPFKV  G  DKP I V +KGE K F  EEISSMVLIKM+E+AEA++G  + NAV+TVPAYFNDSQRQATKDAG IAGLNV
Sbjct:    5 QGASVGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPANTVFDAKRLIGRKFNDPATQADIKHWPFKVTPGAGDKPQITVEFKGETKTFQPEEISSMVLIKMKEVAEAFIGTAVNNAVITVPAYFNDSQRQATKDAGAIAGLNV 172          
BLAST of FC876403 vs. ExPASy Swiss-Prot
Match: HS7C2_DICDI (Heat shock cognate 70 kDa protein 2 OS=Dictyostelium discoideum GN=hspE-1 PE=1 SV=1)

HSP 1 Score: 268.47 bits (685), Expect = 1.964e-71
Identity = 131/165 (79.39%), Postives = 144/165 (87.27%), Query Frame = 1
Query:  124 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVTMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 618
            +IGIDLGTTYSCVGVWQ+DRVEIIANDQGNRTTPSYV F +TERLIGDAAKNQV MNPTNT+FDAKRLIGR+FSD  +Q DMK WPFKVIA   DKP + V +KGE K F+ EE+SSMVL+KM+E AEAYLG TI NAV+TVPAYFNDSQRQATKDAG IA LNV
Sbjct:    4 SIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFNETERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFSDPVIQSDMKHWPFKVIAKEGDKPHLQVEFKGEVKTFSPEEVSSMVLLKMKETAEAYLGKTINNAVITVPAYFNDSQRQATKDAGAIAKLNV 168          
BLAST of FC876403 vs. ExPASy Swiss-Prot
Match: HSP7C_CHICK (Heat shock cognate 71 kDa protein OS=Gallus gallus GN=HSPA8 PE=1 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 2.565e-71
Identity = 134/168 (79.76%), Postives = 144/168 (85.71%), Query Frame = 1
Query:  115 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVTMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 618
            +GPA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYV FTDTERLIGDAAKNQV MNPTNTVFDAKRLIGRRF D+ VQ DMK WPF V+   A +P + V YKGE K F  EEISSMVL KM+EIAEAYLG T+ NAVVTVPAYFNDSQRQ TKDAG IAGLNV
Sbjct:    3 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDSVVQSDMKHWPFTVV-NDAGRPKVQVEYKGETKSFYPEEISSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQGTKDAGTIAGLNV 169          
BLAST of FC876403 vs. ExPASy Swiss-Prot
Match: HSP70_LEIDO (Heat shock 70 kDa protein OS=Leishmania donovani GN=HSP70 PE=3 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 4.375e-71
Identity = 132/165 (80.00%), Postives = 143/165 (86.67%), Query Frame = 1
Query:  124 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVTMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 618
            AIGIDLGTTYSCVGVWQ++RV+IIANDQGNRTTPSYV FTD+ERLIGDAAKNQV MNP NTVFDAKRLIGR+F+D+ VQ DMK WPFKV     DKPMI V Y+GEEK F  EEISSMVL+KM+E AEAYLG  +K AVVTVPAYFNDSQRQATKDAG IAGL V
Sbjct:    6 AIGIDLGTTYSCVGVWQNERVDIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPHNTVFDAKRLIGRKFNDSVVQSDMKHWPFKVTTKGDDKPMIAVQYRGEEKTFTPEEISSMVLLKMKETAEAYLGKQVKKAVVTVPAYFNDSQRQATKDAGTIAGLEV 170          
BLAST of FC876403 vs. ExPASy Swiss-Prot
Match: HSP7C_ICTPU (Heat shock cognate 71 kDa protein OS=Ictalurus punctatus GN=hsc70 PE=2 SV=1)

HSP 1 Score: 266.159 bits (679), Expect = 9.746e-71
Identity = 131/168 (77.98%), Postives = 146/168 (86.90%), Query Frame = 1
Query:  115 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVTMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 618
            +GPA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYV FTD+ERLIGDAAKNQV MNPTNT+FDAKRLIGRRF D+ VQ DMK WPFKVI+    +P + V YKGE K F  EEISSMVL+KM+EIAEAYLG +I NAV+TVPAYFNDSQRQ TKDAG I+GLNV
Sbjct:    3 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPTNTIFDAKRLIGRRFEDSVVQADMKHWPFKVIS-DGGRPRLEVEYKGEAKNFYPEEISSMVLVKMKEIAEAYLGKSINNAVITVPAYFNDSQRQRTKDAGTISGLNV 169          
BLAST of FC876403 vs. ExPASy Swiss-Prot
Match: HSP70_CHLRE (Heat shock 70 kDa protein OS=Chlamydomonas reinhardtii GN=HSP70 PE=2 SV=2)

HSP 1 Score: 266.159 bits (679), Expect = 9.746e-71
Identity = 137/170 (80.59%), Postives = 147/170 (86.47%), Query Frame = 1
Query:  115 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVTMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGA--TIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 618
            E PAIGIDLGTTYSCVGVWQ+DRVEIIANDQGNRTTPSYV FTDTERLIGDAAKNQV MNP +TVFDAKRLIGR+FSD  VQ D+KLWPF+V AG  D P I V+YK EEK F AEEISSMVLIKM+E A+A LGA   +K AVVTVPAYFNDSQRQATKDAG+IAGL V
Sbjct:    4 EAPAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRHTVFDAKRLIGRKFSDPIVQADIKLWPFQVRAGAHDVPEIVVSYKNEEKVFKAEEISSMVLIKMKETAQASLGADREVKKAVVTVPAYFNDSQRQATKDAGMIAGLEV 173          
BLAST of FC876403 vs. ExPASy Swiss-Prot
Match: HSP72_RAT (Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus GN=Hspa2 PE=2 SV=2)

HSP 1 Score: 265.774 bits (678), Expect = 1.273e-70
Identity = 131/167 (78.44%), Postives = 145/167 (86.83%), Query Frame = 1
Query:  118 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVTMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 618
            GPAIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYV FTDTERLIGDAAKNQV MNPTNT+FDAKRLIGR+F DA+VQ DMK WPF+V++    KP + V YKGE K F  EEISSMVL KM+EIAEAYLG  +++AV+TVPAYFNDSQRQATKDAG I GLNV
Sbjct:    5 GPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVS-EGGKPKVQVEYKGEMKTFFPEEISSMVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNV 170          
BLAST of FC876403 vs. ExPASy Swiss-Prot
Match: HSP72_PARBA (Heat shock 70 kDa protein 2 OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=HSP70-2 PE=2 SV=2)

HSP 1 Score: 265.774 bits (678), Expect = 1.273e-70
Identity = 133/166 (80.12%), Postives = 147/166 (88.55%), Query Frame = 1
Query:  121 PAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVTMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 618
            PAIGIDLGTTYSCVG+++ DR+EIIANDQGNRTTPS+V FTDTERLIGDAAKNQV MNP+NTVFDAKRLIGR+F+D  VQ DMK +PFKVI   A KP+I V +KGEEKQF  EEISSMVL KMRE AE+YLG T+ NAVVTVPAYFNDSQRQATKDAG+IAGLNV
Sbjct:    3 PAIGIDLGTTYSCVGIFRDDRIEIIANDQGNRTTPSFVAFTDTERLIGDAAKNQVAMNPSNTVFDAKRLIGRKFADPEVQSDMKHFPFKVI-DKAGKPVISVEFKGEEKQFTPEEISSMVLTKMRETAESYLGGTVNNAVVTVPAYFNDSQRQATKDAGLIAGLNV 167          
BLAST of FC876403 vs. ExPASy Swiss-Prot
Match: HSP70_ONCMY (Heat shock cognate 70 kDa protein OS=Oncorhynchus mykiss GN=hsc71 PE=2 SV=2)

HSP 1 Score: 265.774 bits (678), Expect = 1.273e-70
Identity = 132/168 (78.57%), Postives = 145/168 (86.31%), Query Frame = 1
Query:  115 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVTMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 618
            +GPA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYV FTD+ERLIGDAAKNQV MNP NTVFDAKRLIGRRF D  VQ DMK WPF+VI   + +P + V YKGE K F  EEISSMVL+KM+EIAEAYLG T+ NAVVTVPAYFNDSQRQATKDAG I+GLNV
Sbjct:    3 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPCNTVFDAKRLIGRRFDDGVVQSDMKHWPFEVI-NDSTRPKLQVEYKGETKSFYPEEISSMVLVKMKEIAEAYLGKTVNNAVVTVPAYFNDSQRQATKDAGTISGLNV 169          
The following BLAST results are available for this feature:
BLAST of FC876403 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP70_ONCTS5.168e-7279.76Heat shock 70 kDa protein OS=Oncorhynchus tschawyt... [more]
HSP70_ACHKL5.168e-7276.79Heat shock 70 kDa protein OS=Achlya klebsiana GN=H... [more]
HS7C2_DICDI1.964e-7179.39Heat shock cognate 70 kDa protein 2 OS=Dictyosteli... [more]
HSP7C_CHICK2.565e-7179.76Heat shock cognate 71 kDa protein OS=Gallus gallus... [more]
HSP70_LEIDO4.375e-7180.00Heat shock 70 kDa protein OS=Leishmania donovani G... [more]
HSP7C_ICTPU9.746e-7177.98Heat shock cognate 71 kDa protein OS=Ictalurus pun... [more]
HSP70_CHLRE9.746e-7180.59Heat shock 70 kDa protein OS=Chlamydomonas reinhar... [more]
HSP72_RAT1.273e-7078.44Heat shock-related 70 kDa protein 2 OS=Rattus norv... [more]
HSP72_PARBA1.273e-7080.12Heat shock 70 kDa protein 2 OS=Paracoccidioides br... [more]
HSP70_ONCMY1.273e-7078.57Heat shock cognate 70 kDa protein OS=Oncorhynchus ... [more]

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Properties
Property NameValue
Genbank descriptionC32004D02EF DevOvary1 Citrus clementina cDNA clone C32004D02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876403 ID=FC876403; Name=FC876403; organism=Citrus clementina; type=EST; length=620bp
ATCAAGTTTTTTATTTTTTAGATTTGAGATCTATTTTTGTTTTTCTTCGC
TGTCAAAGCAAACTACTTTATTCTCCTTTTCCTTGCTTGAGTTTTGATAA
TGGCCGGAAAAGGAGAGGGACCAGCGATCGGTATCGATTTGGGGACGACG
TACTCCTGCGTCGGAGTCTGGCAGCATGACAGAGTCGAGATTATCGCCAA
TGACCAAGGGAACCGGACGACGCCGTCTTATGTGGGGTTCACCGACACGG
AGCGTTTGATCGGGGACGCTGCTAAGAACCAGGTCACCATGAACCCCACG
AACACCGTCTTTGATGCAAAGAGGTTGATTGGTAGGAGATTCAGCGATGC
ATCAGTCCAAGGCGATATGAAGCTATGGCCATTTAAGGTGATTGCTGGAC
CTGCTGACAAGCCCATGATTGGTGTTAACTACAAGGGCGAAGAGAAGCAG
TTTGCTGCTGAGGAAATCTCGTCTATGGTGCTCATCAAGATGCGTGAGAT
TGCTGAGGCTTACCTTGGCGCAACTATTAAGAATGCAGTCGTTACTGTCC
CTGCTTACTTCAATGACTCACAGAGGCAGGCCACCAAGGATGCCGGTGTC
ATTGCTGGGCTTAATGTGAT
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