FC876403

Overview
NameFC876403
Unique NameFC876403
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length620
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876403 vs. ExPASy Swiss-Prot
Match: HSP72_HUMAN (Heat shock-related 70 kDa protein 2 OS=Homo sapiens GN=HSPA2 PE=1 SV=1)

HSP 1 Score: 265.388 bits (677), Expect = 1.662e-70
Identity = 131/167 (78.44%), Postives = 144/167 (86.23%), Query Frame = 1
Query:  118 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVTMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 618
            GPAIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYV FTDTERLIGDAAKNQV MNPTNT+FDAKRLIGR+F DA+VQ DMK WPF+V++    KP + V YKGE K F  EEISSMVL KM+EIAEAYLG  + +AV+TVPAYFNDSQRQATKDAG I GLNV
Sbjct:    5 GPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVS-EGGKPKVQVEYKGETKTFFPEEISSMVLTKMKEIAEAYLGGKVHSAVITVPAYFNDSQRQATKDAGTITGLNV 170          
BLAST of FC876403 vs. ExPASy Swiss-Prot
Match: HSP72_CAPHI (Heat shock-related 70 kDa protein 2 OS=Capra hircus GN=HSPA2 PE=3 SV=1)

HSP 1 Score: 265.388 bits (677), Expect = 1.662e-70
Identity = 131/167 (78.44%), Postives = 145/167 (86.83%), Query Frame = 1
Query:  118 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVTMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 618
            GPAIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYV FTDTERLIGDAAKNQV MNPTNT+FDAKRLIGR+F DA+VQ DMK WPF+V++    KP + V YKGE K F  EEISSMVL KM+EIAEAYLG  +++AV+TVPAYFNDSQRQATKDAG I GLNV
Sbjct:    5 GPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVS-EGGKPKVQVEYKGEIKTFFPEEISSMVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNV 170          
BLAST of FC876403 vs. ExPASy Swiss-Prot
Match: HSP72_BOVIN (Heat shock-related 70 kDa protein 2 OS=Bos taurus GN=HSPA2 PE=2 SV=2)

HSP 1 Score: 265.388 bits (677), Expect = 1.662e-70
Identity = 131/167 (78.44%), Postives = 145/167 (86.83%), Query Frame = 1
Query:  118 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVTMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 618
            GPAIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYV FTDTERLIGDAAKNQV MNPTNT+FDAKRLIGR+F DA+VQ DMK WPF+V++    KP + V YKGE K F  EEISSMVL KM+EIAEAYLG  +++AV+TVPAYFNDSQRQATKDAG I GLNV
Sbjct:    5 GPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVS-EGGKPKVQVEYKGEIKTFFPEEISSMVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNV 170          
BLAST of FC876403 vs. ExPASy Swiss-Prot
Match: HSP74_TRYBB (Heat shock 70 kDa protein 4 OS=Trypanosoma brucei brucei PE=2 SV=2)

HSP 1 Score: 265.003 bits (676), Expect = 2.171e-70
Identity = 130/165 (78.79%), Postives = 144/165 (87.27%), Query Frame = 1
Query:  124 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVTMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 618
            AIGIDLGTTYSCVGVWQ++RVEIIANDQGNRTTPSYV FTD+ERLIGDAAKNQV MNPTNTVFDAKRLIGR+FSD+ VQ DMK WPFKV+    DKP+I V ++GE K F  EEISSMVL+KM+E+AE+YLG  +  AVVTVPAYFNDSQRQATKDAG IAGL V
Sbjct:    6 AIGIDLGTTYSCVGVWQNERVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPTNTVFDAKRLIGRKFSDSVVQSDMKHWPFKVVTKGDDKPVIQVQFRGETKTFNPEEISSMVLLKMKEVAESYLGKQVAKAVVTVPAYFNDSQRQATKDAGTIAGLEV 170          
BLAST of FC876403 vs. ExPASy Swiss-Prot
Match: HSP72_USTMA (Heat shock 70 kDa protein 2 OS=Ustilago maydis GN=UMS2 PE=3 SV=2)

HSP 1 Score: 265.003 bits (676), Expect = 2.171e-70
Identity = 131/165 (79.39%), Postives = 143/165 (86.67%), Query Frame = 1
Query:  124 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVTMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 618
            AIGIDLGTTYSCV VWQ+DRVE+IANDQGNRTTPSYV FTD+ERLIGDAAKNQV MNP NTVFDAKRLIGR+F DA VQ DMK WPF+V      KP I + YKGE+K F  EEISSMVL+KMRE AEAYLG T+K+AVVTVPAYFNDSQRQATKDAG+I+GLNV
Sbjct:    4 AIGIDLGTTYSCVAVWQNDRVEVIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPHNTVFDAKRLIGRKFDDAEVQSDMKHWPFEV-TSVGGKPQIRIEYKGEKKTFTPEEISSMVLLKMRETAEAYLGGTVKDAVVTVPAYFNDSQRQATKDAGIISGLNV 167          
BLAST of FC876403 vs. ExPASy Swiss-Prot
Match: HSP70_LEIAM (Heat shock 70 kDa protein OS=Leishmania amazonensis GN=HSP70 PE=2 SV=1)

HSP 1 Score: 265.003 bits (676), Expect = 2.171e-70
Identity = 131/165 (79.39%), Postives = 142/165 (86.06%), Query Frame = 1
Query:  124 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVTMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 618
            AIGIDLGTTYSCVGVWQ+DRVEIIANDQGNRTTPSYV FTD+ERLIGDAAKNQV MNP NTVFDAKRLIGR+F+D  VQ DMK WPFKV     DKP+I V Y+GEEK F  E+ISSMVL+KM+E AEAYLG  +K AVVTVPAYFNDSQRQATKDAG I+GL V
Sbjct:    6 AIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPHNTVFDAKRLIGRKFNDLVVQSDMKHWPFKVTTKGDDKPVISVQYRGEEKTFTPEKISSMVLLKMKETAEAYLGKQVKKAVVTVPAYFNDSQRQATKDAGTISGLEV 170          
BLAST of FC876403 vs. ExPASy Swiss-Prot
Match: HSP70_TRIRU (Heat shock 70 kDa protein OS=Trichophyton rubrum GN=HSP70 PE=2 SV=1)

HSP 1 Score: 264.618 bits (675), Expect = 2.836e-70
Identity = 130/166 (78.31%), Postives = 147/166 (88.55%), Query Frame = 1
Query:  121 PAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVTMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 618
            PA+GIDLGTTYSCVG+++ DR+EIIANDQGNRTTPS+V FTDTERLIGDAAKNQV MNP NTVFDAKRLIGR+F+DA VQ DMK +PFKV+   + KP++ V +KGEEKQF  EEISSMVL KMRE AEAYLG T+ NAV+TVPAYFNDSQRQATKDAG+IAGLNV
Sbjct:    3 PAVGIDLGTTYSCVGIFRDDRIEIIANDQGNRTTPSFVAFTDTERLIGDAAKNQVAMNPINTVFDAKRLIGRKFNDAEVQADMKHFPFKVVE-KSGKPIVQVEFKGEEKQFTPEEISSMVLTKMRETAEAYLGGTVNNAVITVPAYFNDSQRQATKDAGLIAGLNV 167          
BLAST of FC876403 vs. ExPASy Swiss-Prot
Match: HSP70_LEIMA (Heat shock 70 kDa protein (Fragment) OS=Leishmania major GN=HSP70 PE=3 SV=1)

HSP 1 Score: 264.618 bits (675), Expect = 2.836e-70
Identity = 130/165 (78.79%), Postives = 143/165 (86.67%), Query Frame = 1
Query:  124 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVTMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 618
            AIGIDLGTTYSCVGVWQ++R++IIANDQGNRTTPSYV FTD+ERLIGDAAKNQV MNP NTVFDAKRLIGR+F+D+ VQ DMK WPFKV     DKP+I V Y+GEEK F  EEISSMVL+KM+E AEAYLG  +K AVVTVPAYFNDSQRQATKDAG IAGL V
Sbjct:    6 AIGIDLGTTYSCVGVWQNERLDIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPHNTVFDAKRLIGRKFNDSVVQSDMKHWPFKVTTKGDDKPVISVQYRGEEKTFTPEEISSMVLLKMKETAEAYLGKQVKKAVVTVPAYFNDSQRQATKDAGTIAGLEV 170          
BLAST of FC876403 vs. ExPASy Swiss-Prot
Match: HSP70_EMENI (Heat shock 70 kDa protein OS=Emericella nidulans GN=hsp70 PE=1 SV=1)

HSP 1 Score: 264.618 bits (675), Expect = 2.836e-70
Identity = 131/166 (78.92%), Postives = 145/166 (87.35%), Query Frame = 1
Query:  121 PAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVTMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 618
            PA+GIDLGTTYSCVGV++ DR++IIANDQGNRTTPS+V FTDTERLIGDAAKNQV MNP NTVFDAKRLIGRRF DA VQ DMK WPFKV+   + KP+I V +KGE KQF  EEISSMVL KMRE AEA+LG T+ NAV+TVPAYFNDSQRQATKDAG+IAGLNV
Sbjct:    3 PAVGIDLGTTYSCVGVFRDDRIDIIANDQGNRTTPSFVAFTDTERLIGDAAKNQVAMNPHNTVFDAKRLIGRRFGDAEVQADMKHWPFKVV-DKSGKPIIEVEFKGETKQFTPEEISSMVLTKMRETAEAFLGGTVNNAVITVPAYFNDSQRQATKDAGLIAGLNV 167          
BLAST of FC876403 vs. ExPASy Swiss-Prot
Match: HSP7A_CAEEL (Heat shock 70 kDa protein A OS=Caenorhabditis elegans GN=hsp-1 PE=1 SV=2)

HSP 1 Score: 264.233 bits (674), Expect = 3.703e-70
Identity = 130/165 (78.79%), Postives = 142/165 (86.06%), Query Frame = 1
Query:  124 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVTMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 618
            A+GIDLGTTYSCVGV+ H +VEIIANDQGNRTTPSYV FTDTERLIGDAAKNQV MNP NTVFDAKRLIGR+F D +VQ DMK WPFKVI+    KP + V YKGE K F  EEISSMVL+KM+E AEA+LG T+K+AVVTVPAYFNDSQRQATKDAG IAGLNV
Sbjct:    6 AVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEISSMVLLKMKETAEAFLGTTVKDAVVTVPAYFNDSQRQATKDAGAIAGLNV 170          
The following BLAST results are available for this feature:
BLAST of FC876403 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP72_HUMAN1.662e-7078.44Heat shock-related 70 kDa protein 2 OS=Homo sapien... [more]
HSP72_CAPHI1.662e-7078.44Heat shock-related 70 kDa protein 2 OS=Capra hircu... [more]
HSP72_BOVIN1.662e-7078.44Heat shock-related 70 kDa protein 2 OS=Bos taurus ... [more]
HSP74_TRYBB2.171e-7078.79Heat shock 70 kDa protein 4 OS=Trypanosoma brucei ... [more]
HSP72_USTMA2.171e-7079.39Heat shock 70 kDa protein 2 OS=Ustilago maydis GN=... [more]
HSP70_LEIAM2.171e-7079.39Heat shock 70 kDa protein OS=Leishmania amazonensi... [more]
HSP70_TRIRU2.836e-7078.31Heat shock 70 kDa protein OS=Trichophyton rubrum G... [more]
HSP70_LEIMA2.836e-7078.79Heat shock 70 kDa protein (Fragment) OS=Leishmania... [more]
HSP70_EMENI2.836e-7078.92Heat shock 70 kDa protein OS=Emericella nidulans G... [more]
HSP7A_CAEEL3.703e-7078.79Heat shock 70 kDa protein A OS=Caenorhabditis eleg... [more]

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Properties
Property NameValue
Genbank descriptionC32004D02EF DevOvary1 Citrus clementina cDNA clone C32004D02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876403 ID=FC876403; Name=FC876403; organism=Citrus clementina; type=EST; length=620bp
ATCAAGTTTTTTATTTTTTAGATTTGAGATCTATTTTTGTTTTTCTTCGC
TGTCAAAGCAAACTACTTTATTCTCCTTTTCCTTGCTTGAGTTTTGATAA
TGGCCGGAAAAGGAGAGGGACCAGCGATCGGTATCGATTTGGGGACGACG
TACTCCTGCGTCGGAGTCTGGCAGCATGACAGAGTCGAGATTATCGCCAA
TGACCAAGGGAACCGGACGACGCCGTCTTATGTGGGGTTCACCGACACGG
AGCGTTTGATCGGGGACGCTGCTAAGAACCAGGTCACCATGAACCCCACG
AACACCGTCTTTGATGCAAAGAGGTTGATTGGTAGGAGATTCAGCGATGC
ATCAGTCCAAGGCGATATGAAGCTATGGCCATTTAAGGTGATTGCTGGAC
CTGCTGACAAGCCCATGATTGGTGTTAACTACAAGGGCGAAGAGAAGCAG
TTTGCTGCTGAGGAAATCTCGTCTATGGTGCTCATCAAGATGCGTGAGAT
TGCTGAGGCTTACCTTGGCGCAACTATTAAGAATGCAGTCGTTACTGTCC
CTGCTTACTTCAATGACTCACAGAGGCAGGCCACCAAGGATGCCGGTGTC
ATTGCTGGGCTTAATGTGAT
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