FC876403

Overview
NameFC876403
Unique NameFC876403
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length620
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876403 vs. ExPASy Swiss-Prot
Match: DNAK_BUCAP (Chaperone protein dnaK OS=Buchnera aphidicola subsp. Schizaphis graminum GN=dnaK PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 9.837e-39
Identity = 85/168 (50.60%), Postives = 113/168 (67.26%), Query Frame = 1
Query:  118 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDT-ERLIGDAAKNQVTMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 618
            G  IGIDLGTT SCV +   ++  ++ N +G+RTTPS + +T+  E L+G  AK Q   NP NT+F  KRLIGR+F D  VQ D+K+ P+ +I        I V    ++++ A  +IS+ VL KM++ AE YLG +IK AV+TVPAYFND+QRQATKDAG IAGL V
Sbjct:    2 GKIIGIDLGTTNSCVAIMDGNKPRVLENSEGDRTTPSIIAYTEKGEVLVGQPAKRQAITNPKNTLFAIKRLIGRKFRDDEVQRDIKIMPYSIINSENGDAWIDV----KKQKMAPPQISAEVLKKMKKTAEDYLGESIKEAVITVPAYFNDAQRQATKDAGRIAGLEV 165          
BLAST of FC876403 vs. ExPASy Swiss-Prot
Match: DNAK_XYLFA (Chaperone protein dnaK OS=Xylella fastidiosa GN=dnaK PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.285e-38
Identity = 86/168 (51.19%), Postives = 111/168 (66.07%), Query Frame = 1
Query:  118 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVTMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 618
            G  IGIDLGTT SC+ + +  +  +I N +G+RTTPS V +T D E L+G AAK Q   NP NT +  KRLIGR+F DA VQ D+ L P+K+         +      + K+ A +EIS+ VL KM++ AE +LG  +  AV+TVPAYFNDSQRQATKDAG IAGL+V
Sbjct:    2 GKIIGIDLGTTNSCLAIIEGGKGRVIENSEGDRTTPSIVAYTKDGEVLVGAAAKRQAVTNPKNTFYAVKRLIGRKFGDAEVQKDLDLVPYKITQHDNGDAWVAT---ADAKKLAPQEISAKVLEKMKKTAEDFLGEKVTEAVITVPAYFNDSQRQATKDAGRIAGLDV 166          
BLAST of FC876403 vs. ExPASy Swiss-Prot
Match: DNAK_STRM5 (Chaperone protein dnaK OS=Stenotrophomonas maltophilia (strain R551-3) GN=dnaK PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.285e-38
Identity = 85/168 (50.60%), Postives = 112/168 (66.67%), Query Frame = 1
Query:  118 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVTMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 618
            G  IGIDLGTT SCV +    +  +I N +G+RTTPS V +T D E L+G +AK Q   NP NT +  KRLIGR+F+DA VQ D+   P+ ++A       +  +   + K+ A +EIS+ VL KM++ AE +LG  +  AV+TVPAYFNDSQRQATKDAG IAGL+V
Sbjct:    2 GKIIGIDLGTTNSCVAIMDGGKARVIENSEGDRTTPSIVAYTKDGEVLVGASAKRQAVTNPKNTFYAVKRLIGRKFTDAEVQKDIAHVPYSILAHDNGDAWVATS---DAKKMAPQEISAKVLEKMKKTAEDFLGEKVTEAVITVPAYFNDSQRQATKDAGRIAGLDV 166          
BLAST of FC876403 vs. ExPASy Swiss-Prot
Match: DNAK_SODGM (Chaperone protein dnaK OS=Sodalis glossinidius (strain morsitans) GN=dnaK PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.285e-38
Identity = 84/168 (50.00%), Postives = 114/168 (67.86%), Query Frame = 1
Query:  118 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVTMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 618
            G  IGIDLGTT SC+ + +  +  ++ N +G+RTTPS + +T D E L+G  AK Q   NP NT+F  KRLIGRR+ D  VQ D+ + P+K++A  AD     +  KG++   A  +IS+ +L KM++ AE YLG  +  AV+TVPAYFND+QRQATKDAG IAGL+V
Sbjct:    2 GKIIGIDLGTTNSCIAIIEGSKPRVLENSEGDRTTPSIIAYTQDGEILVGQPAKRQSVTNPQNTLFAIKRLIGRRYQDEEVQRDVSIMPYKIVA--ADNGDAWLEVKGQK--MAPPQISAEILKKMKKTAEDYLGEPVTEAVITVPAYFNDTQRQATKDAGRIAGLDV 165          
BLAST of FC876403 vs. ExPASy Swiss-Prot
Match: DNAK_RICAH (Chaperone protein dnaK OS=Rickettsia akari (strain Hartford) GN=dnaK PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.285e-38
Identity = 78/167 (46.71%), Postives = 109/167 (65.27%), Query Frame = 1
Query:  118 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVTMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 618
            G  IGIDLGTT SCV V +    ++I N +G RTTPS + F + E+L+G +AK Q   NP+NT++  KRLIGR F+D  V+ D  + P+ ++        +    + +  +++  +IS+ +L KM+E AE YLG  +  AV+TVPAYFND+QRQATKDAG IAGL V
Sbjct:    2 GKVIGIDLGTTNSCVAVMEGKEPKVIENAEGERTTPSIIAFANGEKLVGQSAKRQAVTNPSNTIYAVKRLIGRNFTDPMVKKDQDIVPYNIVKADNGDAWV----EADSNKYSPSQISAFILQKMKETAENYLGEKVTQAVITVPAYFNDAQRQATKDAGKIAGLEV 164          
BLAST of FC876403 vs. ExPASy Swiss-Prot
Match: DNAK_RHIME (Chaperone protein dnaK OS=Rhizobium meliloti GN=dnaK PE=2 SV=2)

HSP 1 Score: 159.458 bits (402), Expect = 1.285e-38
Identity = 88/165 (53.33%), Postives = 110/165 (66.67%), Query Frame = 1
Query:  127 IGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVTMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 618
            IGIDLGTT SCV V      ++I N +G RTTPS V FT D ERL+G  AK Q   NP NT+F  KRLIGR F D + Q D  + P+K++   AD     V   G    ++  +IS+M+L KM+E AE+YLG  ++ AV+TVPAYFND+QRQATKDAG IAGL+V
Sbjct:    5 IGIDLGTTNSCVSVMDGKDAKVIENAEGARTTPSMVAFTEDGERLVGQPAKRQAVTNPENTLFAIKRLIGRTFEDPTTQKDKGMVPYKIVK--ADNGDAWVEAHGTS--YSPSQISAMILQKMKETAESYLGEKVEKAVITVPAYFNDAQRQATKDAGKIAGLDV 165          
BLAST of FC876403 vs. ExPASy Swiss-Prot
Match: DNAK_PSYIN (Chaperone protein dnaK OS=Psychromonas ingrahamii (strain 37) GN=dnaK PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.285e-38
Identity = 88/167 (52.69%), Postives = 109/167 (65.27%), Query Frame = 1
Query:  118 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVTMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 618
            G  IGIDLGTT SCV V      +II N +G RTTPS + +T+ E L+G  AK Q   NP NT+F  KRLIGRR+ D  VQ D+K+ P+K++   AD     V   G   + A  +IS+ VL KM++ AE YLG  +  AV+TVPAYFND+QRQATKDAG IAGL V
Sbjct:    2 GKIIGIDLGTTNSCVSVLVGGVAKIIENAEGERTTPSIIAYTEGETLVGQPAKRQSVTNPQNTLFAIKRLIGRRYEDEEVQRDIKIMPYKIV--KADNGDAWVEAHG--NKMAPPQISAEVLKKMKKTAEDYLGEKVTGAVITVPAYFNDAQRQATKDAGRIAGLEV 164          
BLAST of FC876403 vs. ExPASy Swiss-Prot
Match: DNAK_PSEFS (Chaperone protein dnaK OS=Pseudomonas fluorescens (strain SBW25) GN=dnaK PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.285e-38
Identity = 85/168 (50.60%), Postives = 113/168 (67.26%), Query Frame = 1
Query:  118 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVTMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 618
            G  IGIDLGTT SCV V ++ + ++I N +G RTTPS + +  D E L+G +AK Q   NP NT++  KRLIGR+F +  VQ D+K+ P+K+         + VN      + +A +IS+ VL KM++ AE YLG T+  AV+TVPAYFNDSQRQATKDAG IAGL+V
Sbjct:    2 GKIIGIDLGTTNSCVSVMENGKAKVIENAEGARTTPSIIAYANDGEILVGQSAKRQAVTNPHNTLYAVKRLIGRKFDEEVVQKDIKMVPYKIAKADNGDAWVEVN----GNKMSAPQISAEVLKKMKKTAEDYLGETVTEAVITVPAYFNDSQRQATKDAGRIAGLDV 165          
BLAST of FC876403 vs. ExPASy Swiss-Prot
Match: DNAK_PSEAE (Chaperone protein dnaK OS=Pseudomonas aeruginosa GN=dnaK PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.285e-38
Identity = 87/168 (51.79%), Postives = 114/168 (67.86%), Query Frame = 1
Query:  118 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVTMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 618
            G  IGIDLGTT SCV + ++  V++I N +G RTTPS + +T D E L+G  AK Q   NP NT++  KRLIGRRF +  VQ D+++ P+ ++   AD     V  KG++   A  +IS+ VL KM++ AE YLG  +  AV+TVPAYFNDSQRQATKDAG IAGL+V
Sbjct:    2 GKIIGIDLGTTNSCVAILENGNVKVIENAEGARTTPSIIAYTNDGETLVGQPAKRQAVTNPQNTLYAVKRLIGRRFEENVVQKDIQMVPYSIVK--ADNGDAWVEVKGQK--MAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDSQRQATKDAGRIAGLDV 165          
BLAST of FC876403 vs. ExPASy Swiss-Prot
Match: DNAK_PSEAB (Chaperone protein dnaK OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=dnaK PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.285e-38
Identity = 87/168 (51.79%), Postives = 114/168 (67.86%), Query Frame = 1
Query:  118 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVTMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 618
            G  IGIDLGTT SCV + ++  V++I N +G RTTPS + +T D E L+G  AK Q   NP NT++  KRLIGRRF +  VQ D+++ P+ ++   AD     V  KG++   A  +IS+ VL KM++ AE YLG  +  AV+TVPAYFNDSQRQATKDAG IAGL+V
Sbjct:    2 GKIIGIDLGTTNSCVAILENGNVKVIENAEGARTTPSIIAYTNDGETLVGQPAKRQAVTNPQNTLYAVKRLIGRRFEENVVQKDIQMVPYSIVK--ADNGDAWVEVKGQK--MAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDSQRQATKDAGRIAGLDV 165          
The following BLAST results are available for this feature:
BLAST of FC876403 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_BUCAP9.837e-3950.60Chaperone protein dnaK OS=Buchnera aphidicola subs... [more]
DNAK_XYLFA1.285e-3851.19Chaperone protein dnaK OS=Xylella fastidiosa GN=dn... [more]
DNAK_STRM51.285e-3850.60Chaperone protein dnaK OS=Stenotrophomonas maltoph... [more]
DNAK_SODGM1.285e-3850.00Chaperone protein dnaK OS=Sodalis glossinidius (st... [more]
DNAK_RICAH1.285e-3846.71Chaperone protein dnaK OS=Rickettsia akari (strain... [more]
DNAK_RHIME1.285e-3853.33Chaperone protein dnaK OS=Rhizobium meliloti GN=dn... [more]
DNAK_PSYIN1.285e-3852.69Chaperone protein dnaK OS=Psychromonas ingrahamii ... [more]
DNAK_PSEFS1.285e-3850.60Chaperone protein dnaK OS=Pseudomonas fluorescens ... [more]
DNAK_PSEAE1.285e-3851.79Chaperone protein dnaK OS=Pseudomonas aeruginosa G... [more]
DNAK_PSEAB1.285e-3851.79Chaperone protein dnaK OS=Pseudomonas aeruginosa (... [more]

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Properties
Property NameValue
Genbank descriptionC32004D02EF DevOvary1 Citrus clementina cDNA clone C32004D02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876403 ID=FC876403; Name=FC876403; organism=Citrus clementina; type=EST; length=620bp
ATCAAGTTTTTTATTTTTTAGATTTGAGATCTATTTTTGTTTTTCTTCGC
TGTCAAAGCAAACTACTTTATTCTCCTTTTCCTTGCTTGAGTTTTGATAA
TGGCCGGAAAAGGAGAGGGACCAGCGATCGGTATCGATTTGGGGACGACG
TACTCCTGCGTCGGAGTCTGGCAGCATGACAGAGTCGAGATTATCGCCAA
TGACCAAGGGAACCGGACGACGCCGTCTTATGTGGGGTTCACCGACACGG
AGCGTTTGATCGGGGACGCTGCTAAGAACCAGGTCACCATGAACCCCACG
AACACCGTCTTTGATGCAAAGAGGTTGATTGGTAGGAGATTCAGCGATGC
ATCAGTCCAAGGCGATATGAAGCTATGGCCATTTAAGGTGATTGCTGGAC
CTGCTGACAAGCCCATGATTGGTGTTAACTACAAGGGCGAAGAGAAGCAG
TTTGCTGCTGAGGAAATCTCGTCTATGGTGCTCATCAAGATGCGTGAGAT
TGCTGAGGCTTACCTTGGCGCAACTATTAAGAATGCAGTCGTTACTGTCC
CTGCTTACTTCAATGACTCACAGAGGCAGGCCACCAAGGATGCCGGTGTC
ATTGCTGGGCTTAATGTGAT
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