FC876403

Overview
NameFC876403
Unique NameFC876403
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length620
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876403 vs. ExPASy Swiss-Prot
Match: DNAK_METS4 (Chaperone protein dnaK OS=Methylobacterium sp. (strain 4-46) GN=dnaK PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.191e-38
Identity = 88/169 (52.07%), Postives = 110/169 (65.09%), Query Frame = 1
Query:  118 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDT-ERLIGDAAKNQVTMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVI-AGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 618
            G  IGIDLGTT SCV V +  + ++I N +G RTTPS V FTD  ERL+G  AK Q   NP+ T F  KRLIGR + D   Q D  L P+ ++ AG  D  +     + + KQF+  +IS+  L KM+E AE+YLG  +  AV+TVPAYFND+QRQATKDAG IAGL V
Sbjct:    2 GKVIGIDLGTTNSCVAVMEGTQPKVIENAEGARTTPSIVAFTDEGERLVGQPAKRQAVTNPSRTFFAIKRLIGRTYDDPMTQKDKGLVPYHIVRAGNGDAWV-----EADGKQFSPSQISAFTLQKMKETAESYLGQPVTQAVITVPAYFNDAQRQATKDAGKIAGLEV 165          
BLAST of FC876403 vs. ExPASy Swiss-Prot
Match: DNAK_BDEBA (Chaperone protein dnaK OS=Bdellovibrio bacteriovorus GN=dnaK PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.191e-38
Identity = 85/168 (50.60%), Postives = 113/168 (67.26%), Query Frame = 1
Query:  118 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVTMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 618
            G  IGIDLGTT SCV + +    +++ N++G RTTPS V +T D +RL+G  AK Q   NP NT++ AKR IGRRF +  +Q ++KL P+ V+A   D       +K + K  + EEI + VL K++++AE YLG  +  AVVTVPAYFND+QRQATKDAG IAGL V
Sbjct:    2 GKIIGIDLGTTNSCVAIMEGGEPKVLVNEEGARTTPSVVAYTKDGDRLVGQIAKRQAVTNPENTIYSAKRFIGRRFEE--IQEEIKLVPYTVVAKGND-----CAFKVQGKTASPEEIGAAVLAKLKKVAEDYLGEPVTEAVVTVPAYFNDAQRQATKDAGRIAGLEV 162          
BLAST of FC876403 vs. ExPASy Swiss-Prot
Match: HSP7M_DICDI (Heat shock 70 kDa protein, mitochondrial OS=Dictyostelium discoideum GN=mhsp70 PE=1 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 2.862e-38
Identity = 87/171 (50.88%), Postives = 109/171 (63.74%), Query Frame = 1
Query:  109 KGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVTMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 618
            K  G  IGIDLGTT SCV V Q     ++ N +G RTTPS V FT D ++++G  AK Q+  N  NT+F  KRLIGRRF D   + DM + P+K++ GP       V  KG  K  +  E  +MVL KM+E AE  LG  + +AV+TVPAYF+DSQRQAT+DAG IAGL V
Sbjct:   27 KISGQVIGIDLGTTNSCVAVMQGAEARVLENAEGGRTTPSVVAFTEDNQKIVGLPAKRQMVTNAENTLFATKRLIGRRFDDPMTKKDMTMVPYKIVKGPNGDAWFEV--KG--KMISPSEAGAMVLQKMKETAETNLGGPVTDAVITVPAYFDDSQRQATRDAGTIAGLKV 193          
BLAST of FC876403 vs. ExPASy Swiss-Prot
Match: DNAK_PSEE4 (Chaperone protein dnaK OS=Pseudomonas entomophila (strain L48) GN=dnaK PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 2.862e-38
Identity = 86/168 (51.19%), Postives = 110/168 (65.48%), Query Frame = 1
Query:  118 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVTMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 618
            G  IGIDLGTT SCV V ++   ++I N +G RTTPS + +  D E L+G +AK Q   NP NT+F  KRLIGRRF +  VQ D+KL P+K++        +    +   K  A  +IS+ VL KM++ AE YLG  +  AV+TVPAYFNDSQRQATKDAG IAGL+V
Sbjct:    2 GKIIGIDLGTTNSCVSVLENGTAKVIENAEGARTTPSIIAYANDGEILVGQSAKRQAVTNPHNTLFAVKRLIGRRFDEEVVQKDIKLVPYKIVKASNGDAWV----QASGKDMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDSQRQATKDAGRIAGLDV 165          
BLAST of FC876403 vs. ExPASy Swiss-Prot
Match: DNAK_LEPCP (Chaperone protein dnaK OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=dnaK PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 2.862e-38
Identity = 87/168 (51.79%), Postives = 113/168 (67.26%), Query Frame = 1
Query:  118 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVTMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 618
            G  IGIDLGTT SCV V + +   +I N +G RTTPS + +  D E L+G +AK Q   NP NT++  KRLIGR+F++  VQ D+ L P+K+ A  AD     V  +G  K+ A  ++S+ VL KM++ AE YLG  +  AV+TVPAYFNDSQRQATKDAG IAGL+V
Sbjct:    2 GKIIGIDLGTTNSCVAVMEGNTTRVIENSEGARTTPSIIAYQEDGEILVGASAKRQAVTNPRNTLYAVKRLIGRKFTEKEVQKDIDLMPYKIAA--ADNGDAWVEVRG--KRMAPPQVSAEVLRKMKKTAEDYLGEEVTEAVITVPAYFNDSQRQATKDAGRIAGLDV 165          
BLAST of FC876403 vs. ExPASy Swiss-Prot
Match: DNAK_DESDA (Chaperone protein dnaK OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) GN=dnaK PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 2.862e-38
Identity = 85/164 (51.83%), Postives = 108/164 (65.85%), Query Frame = 1
Query:  127 IGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVTMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 618
            IGIDLGTT SCV V +    + I N +G RTTPS V FTD ERL+G+ AK Q   NPT T+F  KRL+GR+F    V    +  P+ ++  P      GV   G  + +++ EIS+M+L K++  AEAYLG T+  AV+TVPAYFND+QRQATKDAG IAGL V
Sbjct:    5 IGIDLGTTNSCVYVMEGKDPKCITNPEGGRTTPSVVAFTDKERLVGEIAKRQAVTNPTRTIFAIKRLMGRKFDSPEVDRWKEHSPYAIVKAPNGD--AGVEVDG--RTYSSPEISAMILAKLKADAEAYLGETVTEAVITVPAYFNDAQRQATKDAGRIAGLEV 164          
BLAST of FC876403 vs. ExPASy Swiss-Prot
Match: DNAK_BURCH (Chaperone protein dnaK OS=Burkholderia cenocepacia (strain HI2424) GN=dnaK PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 2.862e-38
Identity = 88/168 (52.38%), Postives = 111/168 (66.07%), Query Frame = 1
Query:  118 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTD-TERLIGDAAKNQVTMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 618
            G  IGIDLGTT SCV + + ++V++I N +G RTTPS + + D  E L+G  AK Q   NP NT+F  KRLIGRRF +  VQ D+ L P+ +I   AD     V   GE+   A  ++S+ VL KM++ AE YLG  +  AV+TVPAYFNDSQRQATKDAG IAGL V
Sbjct:    2 GKIIGIDLGTTNSCVAIMEGNQVKVIENSEGTRTTPSIIAYMDDNEVLVGAPAKRQSVTNPKNTLFAVKRLIGRRFEEKEVQKDIGLMPYSIIK--ADNGDAWVEAHGEK--LAPPQVSAEVLRKMKKTAEDYLGEPVTEAVITVPAYFNDSQRQATKDAGRIAGLEV 165          
BLAST of FC876403 vs. ExPASy Swiss-Prot
Match: DNAK_BURCC (Chaperone protein dnaK OS=Burkholderia cenocepacia (strain MC0-3) GN=dnaK PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 2.862e-38
Identity = 88/168 (52.38%), Postives = 111/168 (66.07%), Query Frame = 1
Query:  118 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTD-TERLIGDAAKNQVTMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 618
            G  IGIDLGTT SCV + + ++V++I N +G RTTPS + + D  E L+G  AK Q   NP NT+F  KRLIGRRF +  VQ D+ L P+ +I   AD     V   GE+   A  ++S+ VL KM++ AE YLG  +  AV+TVPAYFNDSQRQATKDAG IAGL V
Sbjct:    2 GKIIGIDLGTTNSCVAIMEGNQVKVIENSEGTRTTPSIIAYMDDNEVLVGAPAKRQSVTNPKNTLFAVKRLIGRRFEEKEVQKDIGLMPYSIIK--ADNGDAWVEAHGEK--LAPPQVSAEVLRKMKKTAEDYLGEPVTEAVITVPAYFNDSQRQATKDAGRIAGLEV 165          
BLAST of FC876403 vs. ExPASy Swiss-Prot
Match: DNAK_BURCA (Chaperone protein dnaK OS=Burkholderia cenocepacia (strain AU 1054) GN=dnaK PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 2.862e-38
Identity = 88/168 (52.38%), Postives = 111/168 (66.07%), Query Frame = 1
Query:  118 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTD-TERLIGDAAKNQVTMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 618
            G  IGIDLGTT SCV + + ++V++I N +G RTTPS + + D  E L+G  AK Q   NP NT+F  KRLIGRRF +  VQ D+ L P+ +I   AD     V   GE+   A  ++S+ VL KM++ AE YLG  +  AV+TVPAYFNDSQRQATKDAG IAGL V
Sbjct:    2 GKIIGIDLGTTNSCVAIMEGNQVKVIENSEGTRTTPSIIAYMDDNEVLVGAPAKRQSVTNPKNTLFAVKRLIGRRFEEKEVQKDIGLMPYSIIK--ADNGDAWVEAHGEK--LAPPQVSAEVLRKMKKTAEDYLGEPVTEAVITVPAYFNDSQRQATKDAGRIAGLEV 165          
BLAST of FC876403 vs. ExPASy Swiss-Prot
Match: DNAK2_PHOPR (Chaperone protein dnaK 2 OS=Photobacterium profundum GN=dnaK2 PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 2.862e-38
Identity = 86/165 (52.12%), Postives = 111/165 (67.27%), Query Frame = 1
Query:  127 IGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVTMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 618
            IGIDLGTT SC+ +   D+  +I N +G RTT S + +T D E L+G  AK Q   NP NT+F  KRL+GRRF D  VQ D+++ PF ++   AD     V  KG  K+ AA ++S+ VL KM++ AE YLG  +  AV+TVPAYFND+QRQATKDAG IAGL+V
Sbjct:    5 IGIDLGTTNSCIALLDGDKPRVIENAEGERTTASVIAYTQDGEILVGQPAKRQAVTNPKNTLFAIKRLLGRRFEDEEVQRDIEIMPFNIVK--ADNGDAWVEAKG--KKMAAPQVSAEVLKKMKKTAEDYLGEEVTGAVITVPAYFNDAQRQATKDAGRIAGLDV 165          
The following BLAST results are available for this feature:
BLAST of FC876403 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_METS42.191e-3852.07Chaperone protein dnaK OS=Methylobacterium sp. (st... [more]
DNAK_BDEBA2.191e-3850.60Chaperone protein dnaK OS=Bdellovibrio bacteriovor... [more]
HSP7M_DICDI2.862e-3850.88Heat shock 70 kDa protein, mitochondrial OS=Dictyo... [more]
DNAK_PSEE42.862e-3851.19Chaperone protein dnaK OS=Pseudomonas entomophila ... [more]
DNAK_LEPCP2.862e-3851.79Chaperone protein dnaK OS=Leptothrix cholodnii (st... [more]
DNAK_DESDA2.862e-3851.83Chaperone protein dnaK OS=Desulfovibrio desulfuric... [more]
DNAK_BURCH2.862e-3852.38Chaperone protein dnaK OS=Burkholderia cenocepacia... [more]
DNAK_BURCC2.862e-3852.38Chaperone protein dnaK OS=Burkholderia cenocepacia... [more]
DNAK_BURCA2.862e-3852.38Chaperone protein dnaK OS=Burkholderia cenocepacia... [more]
DNAK2_PHOPR2.862e-3852.12Chaperone protein dnaK 2 OS=Photobacterium profund... [more]

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Properties
Property NameValue
Genbank descriptionC32004D02EF DevOvary1 Citrus clementina cDNA clone C32004D02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876403 ID=FC876403; Name=FC876403; organism=Citrus clementina; type=EST; length=620bp
ATCAAGTTTTTTATTTTTTAGATTTGAGATCTATTTTTGTTTTTCTTCGC
TGTCAAAGCAAACTACTTTATTCTCCTTTTCCTTGCTTGAGTTTTGATAA
TGGCCGGAAAAGGAGAGGGACCAGCGATCGGTATCGATTTGGGGACGACG
TACTCCTGCGTCGGAGTCTGGCAGCATGACAGAGTCGAGATTATCGCCAA
TGACCAAGGGAACCGGACGACGCCGTCTTATGTGGGGTTCACCGACACGG
AGCGTTTGATCGGGGACGCTGCTAAGAACCAGGTCACCATGAACCCCACG
AACACCGTCTTTGATGCAAAGAGGTTGATTGGTAGGAGATTCAGCGATGC
ATCAGTCCAAGGCGATATGAAGCTATGGCCATTTAAGGTGATTGCTGGAC
CTGCTGACAAGCCCATGATTGGTGTTAACTACAAGGGCGAAGAGAAGCAG
TTTGCTGCTGAGGAAATCTCGTCTATGGTGCTCATCAAGATGCGTGAGAT
TGCTGAGGCTTACCTTGGCGCAACTATTAAGAATGCAGTCGTTACTGTCC
CTGCTTACTTCAATGACTCACAGAGGCAGGCCACCAAGGATGCCGGTGTC
ATTGCTGGGCTTAATGTGAT
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