FC876409

Overview
NameFC876409
Unique NameFC876409
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876409 vs. ExPASy Swiss-Prot
Match: KPYK_NEUCR (Pyruvate kinase OS=Neurospora crassa GN=pyk-1 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.688e-11
Identity = 41/125 (32.80%), Postives = 72/125 (57.60%), Query Frame = 1
Query:  202 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKT-TKKLCAVMLDTVGPELQVVN-KSEKAISLKADGSVVLTPD--CGQEATSQVLPINFDGLAKSVKKGDTIFI 564
            T I+ T+GPK+ SV+ I+    AG++V R +FS G+ EYHQ  ++N + A K    +  A+ LDT GPE++  N K+++ I + A   + +T D     E T + + +++  + K +  G  I++
Sbjct:   34 TSIICTIGPKTNSVEAINKLRDAGLNVVRMNFSHGSYEYHQSVIDNARQAEKVHPGRPIAIALDTKGPEIRTGNTKNDEDIPISAGTILNITTDEKYKDECTIEHMYVDYVNITKVIAPGRIIYV 158          
BLAST of FC876409 vs. ExPASy Swiss-Prot
Match: KPYK_LEIBR (Pyruvate kinase (Fragment) OS=Leishmania braziliensis PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.204e-11
Identity = 36/84 (42.86%), Postives = 53/84 (63.10%), Query Frame = 1
Query:  160 SILEPSKASFFPAMTKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQ 411
            SI EP + +       IV T+GP ++SV+ + G +K+GMSVAR +FS G+ EYHQ T+ N++ A        A+ LDT GPE++
Sbjct:   11 SIFEPLRTT-----GTIVCTIGPSTQSVEALKGLIKSGMSVARMNFSHGSHEYHQTTINNVRQAAAELGVNIAIALDTKGPEIR 89          
BLAST of FC876409 vs. ExPASy Swiss-Prot
Match: KPYK_EMENI (Pyruvate kinase OS=Emericella nidulans GN=pkiA PE=3 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 2.204e-11
Identity = 42/126 (33.33%), Postives = 74/126 (58.73%), Query Frame = 1
Query:  202 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVK-TTKKLCAVMLDTVGPELQVVNK-SEKAISLKADGSVVLTPDCGQEATS---QVLPINFDGLAKSVKKGDTIFI 564
            T I+ T+GPK+ SV+ I+   +AG++V R +FS G+ EYHQ  +++ + A K    +  A+ LDT GPE++  N   +K I +KA   + ++ D  Q AT+   Q + +++  + K +  G  I++
Sbjct:   35 TSIICTIGPKTNSVEKINALRRAGLNVVRMNFSHGSYEYHQSVIDHAREAEKQQAGRPVAIALDTKGPEIRTGNTVGDKDIPIKAGHEMNISTD-EQYATASDDQNMYVDYKNITKVISAGKLIYV 159          
BLAST of FC876409 vs. ExPASy Swiss-Prot
Match: KPYK_BACPY (Pyruvate kinase OS=Bacillus psychrophilus GN=pyk PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.879e-11
Identity = 36/121 (29.75%), Postives = 66/121 (54.55%), Query Frame = 1
Query:  202 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFI 564
            TKIV T+GP S S +++   ++AGM+VAR +FS GN   H+  +++++   +   K+  ++LDT GPE++  +     + L   G  +       E  + V  +++D L + V +G  I +
Sbjct:    4 TKIVCTIGPASESPELLEQLIEAGMNVARLNFSHGNHAEHKARIDSIRKVAREKGKVVGILLDTKGPEIRTHSMMNGKLEL-VTGQKIDISMTQVEGNNDVFSVSYDKLIEDVNEGSVILL 123          
BLAST of FC876409 vs. ExPASy Swiss-Prot
Match: KPYK2_CANGA (Pyruvate kinase 2 OS=Candida glabrata GN=PYK2 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.760e-11
Identity = 34/125 (27.20%), Postives = 70/125 (56.00%), Query Frame = 1
Query:  202 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKT-TKKLCAVMLDTVGPELQV-VNKSEKAISLKADGSVVLTPD--CGQEATSQVLPINFDGLAKSVKKGDTIFI 564
            T I+GT+GPK+ +VD +    KAG+++ R +FS G+ EYHQ  ++N + + +    +  A+ LDT GPE++   N  +    +  +  ++ T D    +    +++ +++  + K ++ G  I++
Sbjct:   22 TAIIGTIGPKTNNVDTLVALRKAGLNIVRMNFSHGSYEYHQSVIDNARKSEQVYPGRPLAIALDTKGPEIRTGTNVDDVDYPIPPNHEMIFTTDDKYAKACDDKIMYVDYKNITKVIQPGKVIYV 146          
BLAST of FC876409 vs. ExPASy Swiss-Prot
Match: KPYK_TRIRE (Pyruvate kinase OS=Trichoderma reesei GN=pki1 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.413e-11
Identity = 39/125 (31.20%), Postives = 72/125 (57.60%), Query Frame = 1
Query:  202 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKT-TKKLCAVMLDTVGPELQVVNKS-EKAISLKADGSVVLTPD--CGQEATSQVLPINFDGLAKSVKKGDTIFI 564
            T I+ T+GPK+ SV+ ++    AG++VAR +FS G+ EYHQ  ++N++A+V     +  A+ LDT GPE++  N + +  I + A   +  T D        +Q + +++  + K ++ G  I++
Sbjct:   44 TSIICTIGPKTNSVEALNKLRDAGLNVARMNFSHGSYEYHQSVIDNVRASVAAHPGRPVAIALDTKGPEIRTGNTAGDVDIPISAGTVMNFTTDEKYATACDTQNMYVDYKNITKVIQPGRVIYV 168          
The following BLAST results are available for this feature:
BLAST of FC876409 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
KPYK_NEUCR1.688e-1132.80Pyruvate kinase OS=Neurospora crassa GN=pyk-1 PE=3... [more]
KPYK_LEIBR2.204e-1142.86Pyruvate kinase (Fragment) OS=Leishmania brazilien... [more]
KPYK_EMENI2.204e-1133.33Pyruvate kinase OS=Emericella nidulans GN=pkiA PE=... [more]
KPYK_BACPY2.879e-1129.75Pyruvate kinase OS=Bacillus psychrophilus GN=pyk P... [more]
KPYK2_CANGA3.760e-1127.20Pyruvate kinase 2 OS=Candida glabrata GN=PYK2 PE=3... [more]
KPYK_TRIRE6.413e-1131.20Pyruvate kinase OS=Trichoderma reesei GN=pki1 PE=3... [more]

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Properties
Property NameValue
Genbank descriptionC32004D10EF DevOvary1 Citrus clementina cDNA clone C32004D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876409 ID=FC876409; Name=FC876409; organism=Citrus clementina; type=EST; length=696bp
GATCGTAAGTATTAATCAACGAATAAACACTAAAAATCAAAACACTCTAA
TCAACGCTAACCGCTGCCTCTTTCATCTCTCGTACTCTCTCTGTATCTCT
CTGTTCAGTGAAAGATGCATTCAAGTCACTTGCTTCTCGAGGAGCCAATC
AGGATGGCTTCAATCCTGGAGCCATCCAAAGCCAGTTTCTTCCCGGCAAT
GACCAAAATTGTTGGAACGCTTGGTCCTAAATCTCGATCTGTTGATGTTA
TATCCGGTTGCCTCAAAGCTGGAATGTCTGTGGCTAGATTCGATTTCTCG
TGGGGTAATACTGAATACCACCAAGAGACCTTGGAGAATCTCAAGGCGGC
AGTTAAGACTACTAAGAAGCTTTGTGCTGTTATGTTGGACACAGTGGGTC
CCGAATTGCAGGTTGTTAATAAGAGTGAGAAGGCAATTTCACTTAAGGCA
GATGGTTCTGTTGTTCTCACACCTGACTGTGGACAAGAAGCCACTTCTCA
AGTTTTGCCCATCAATTTCGATGGACTTGCTAAGTCAGTGAAGAAAGGAG
ACACCATTTTTATCGGTCAATACTTGTTCACTGGAAGTGAGACTACTTCT
GTGTGGCTGGAGGTTTCTGAAGTGAAAGGAAATGATGTAACTTGTGTGAT
AAAGAATACTGCACATTGGCTGGTTCACTTTTCACTTTACATGCTC
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