FC876410

Overview
NameFC876410
Unique NameFC876410
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length639
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876410 vs. ExPASy Swiss-Prot
Match: CATD_DICDI (Cathepsin D OS=Dictyostelium discoideum GN=ctsD PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.028e-17
Identity = 48/111 (43.24%), Postives = 63/111 (56.76%), Query Frame = 1
Query:  310 SKEEETMRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFS-VXXXXXXXXXXXXXXTYXRNGTSAAIQYGTGAISGFFS 639
            +  E   R P +  N   +L    T  + +++F DAQY+G ++IGTP Q F V+FDTGSSNLW+PS KC  + V              TY  NGT   IQYG+GA+SGF S
Sbjct:   28 ASRESRRRVPQKWSNRLSALNAGTT--IPISDFEDAQYYGAITIGTPGQAFKVVFDTGSSNLWIPSKKCPITVVACDLHNKYNSGASSTYVANGTDFTIQYGSGAMSGFVS 136          
BLAST of FC876410 vs. ExPASy Swiss-Prot
Match: CATEB_XENLA (Cathepsin E-B OS=Xenopus laevis GN=ctse-B PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.343e-17
Identity = 51/130 (39.23%), Postives = 68/130 (52.31%), Query Frame = 1
Query:  241 GLVRIGLRKKKLDQINRLVGQTVSKEEETMRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXTYXRNGTSAAIQYGTGAISG 630
            GL+R+ L+++K   I +   +         +  +       S  +       L N+MD QYFGE+SIGTP Q FTVIFDTGSSNLWVPS  C  S               TY  NG + ++QYGTG++SG
Sbjct:   16 GLIRVPLKRQK--SIRKTPKEKGKLSHVWTQQGIDMVQYTDSCNNDQAPSEPLINYMDVQYFGEISIGTPPQNFTVIFDTGSSNLWVPSVYC-ISPACAQHNRFQPQLSSTYESNGNNFSLQYGTGSLSG 142          
BLAST of FC876410 vs. ExPASy Swiss-Prot
Match: CATEA_XENLA (Cathepsin E-A OS=Xenopus laevis GN=ctse-A PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.754e-17
Identity = 53/142 (37.32%), Postives = 73/142 (51.41%), Query Frame = 1
Query:  205 ILSPAAFALPNDGLVRIGLRKKKLDQINRLVGQTVSKEEETMRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXTYXRNGTSAAIQYGTGAISG 630
            IL    FA    GL+R+ L+++K   I + + +         +  +       S  +       L N+MD +YFGE+S+GTP Q FTVIFDTGSSNLWVPS  C  S               TY  NG + ++QYGTG++SG
Sbjct:    4 ILVLLLFATLVYGLIRVPLKRQK--SIRKTLKEKGKLSHIWTQQGIDMVQYTDSCSNDQAPSEPLINYMDVEYFGEISVGTPPQNFTVIFDTGSSNLWVPSVYC-ISQACAQHDRFQPQLSSTYESNGNNFSLQYGTGSLSG 142          
BLAST of FC876410 vs. ExPASy Swiss-Prot
Match: CARP_NANOT (Vacuolar protease A OS=Nannizzia otae (strain CBS 113480) GN=PEP2 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.291e-17
Identity = 43/83 (51.81%), Postives = 55/83 (66.27%), Query Frame = 1
Query:  391 VALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXTYXRNGTSAAIQYGTGAISGFFS 639
            V ++NF++AQYF E+SIGTP QTF V+ DTGSSNLWVP   C  S+              T+ RNGTS AI+YG+G++ GF S
Sbjct:   77 VLIDNFLNAQYFSEISIGTPPQTFKVVLDTGSSNLWVPGKDC-SSIACFLHSTYDSSASSTFTRNGTSFAIRYGSGSLEGFVS 158          
BLAST of FC876410 vs. ExPASy Swiss-Prot
Match: ASPP_AEDAE (Lysosomal aspartic protease OS=Aedes aegypti GN=AAEL006169 PE=1 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 2.291e-17
Identity = 40/82 (48.78%), Postives = 58/82 (70.73%), Query Frame = 1
Query:  397 LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYF-SVXXXXXXXXXXXXXXTYXRNGTSAAIQYGTGAISGFFS 639
            L+N++DAQY+G ++IGTP Q+F V+FDTGSSNLWVPS +C F ++              T+ +NGT+  IQYG+G++SG+ S
Sbjct:   60 LSNYLDAQYYGAITIGTPPQSFKVVFDTGSSNLWVPSKECSFTNIACLMHNKYNAKKSSTFEKNGTAFHIQYGSGSLSGYLS 141          
BLAST of FC876410 vs. ExPASy Swiss-Prot
Match: RENI_CALJA (Renin OS=Callithrix jacchus GN=REN PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.992e-17
Identity = 42/87 (48.28%), Postives = 52/87 (59.77%), Query Frame = 1
Query:  382 TDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC-YFSVXXXXXXXXXXXXXXTYXRNGTSAAIQYGTGAISGFFS 639
            T  V L N+MD QY+GE+ IGTP QTF V+FDTGSSN+WVPS+KC                   +Y  NGT   ++Y TG +SGF S
Sbjct:   67 TSSVILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYSTGTVSGFLS 153          
BLAST of FC876410 vs. ExPASy Swiss-Prot
Match: CATD_SHEEP (Cathepsin D (Fragment) OS=Ovis aries GN=CTSD PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.992e-17
Identity = 41/82 (50.00%), Postives = 53/82 (64.63%), Query Frame = 1
Query:  397 LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC-YFSVXXXXXXXXXXXXXXTYXRNGTSAAIQYGTGAISGFFS 639
            L N+MDAQY+GE+ IGTP Q FTV+FDTGS+NLWVPS  C    +              TY +NGT+  I YG+G++SG+ S
Sbjct:   46 LTNYMDAQYYGEIGIGTPPQCFTVVFDTGSANLWVPSIHCKLLDIACWVHHKYNSDKSSTYVKNGTTFDIHYGSGSLSGYLS 127          
BLAST of FC876410 vs. ExPASy Swiss-Prot
Match: CATD_BOVIN (Cathepsin D OS=Bos taurus GN=CTSD PE=1 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 2.992e-17
Identity = 41/82 (50.00%), Postives = 53/82 (64.63%), Query Frame = 1
Query:  397 LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC-YFSVXXXXXXXXXXXXXXTYXRNGTSAAIQYGTGAISGFFS 639
            L N+MDAQY+GE+ IGTP Q FTV+FDTGS+NLWVPS  C    +              TY +NGT+  I YG+G++SG+ S
Sbjct:   51 LKNYMDAQYYGEIGIGTPPQCFTVVFDTGSANLWVPSIHCKLLDIACWTHRKYNSDKSSTYVKNGTTFDIHYGSGSLSGYLS 132          
BLAST of FC876410 vs. ExPASy Swiss-Prot
Match: RENI_RAT (Renin OS=Rattus norvegicus GN=Ren1 PE=2 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 3.908e-17
Identity = 52/152 (34.21%), Postives = 77/152 (50.66%), Query Frame = 1
Query:  196 LFLILSPAAFALPNDGLVRIGLRKKKLDQINRLV---GQTVSKEEETMRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC-YFSVXXXXXXXXXXXXXXTYXRNGTSAAIQYGTGAISGFFS 639
            L L+ +  +F+LP D      +  KK+  +  ++   G  +++        +++ +       + T  V L N++D QY+GE+ IGTPSQTF VIFDTGS+NLWVPS KC                   +Y  NGT   I YG+G + GF S
Sbjct:   11 LLLLWTSCSFSLPTDTASFGRILLKKMPSVREILEERGVDMTRISAEWGEFIKKSSF-----TNVTSPVVLTNYLDTQYYGEIGIGTPSQTFKVIFDTGSANLWVPSTKCGPLYTACEIHNLYDSSESSSYMENGTEFTIHYGSGKVKGFLS 157          
BLAST of FC876410 vs. ExPASy Swiss-Prot
Match: CARP_ASPFU (Vacuolar protease A OS=Aspergillus fumigatus GN=pep2 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.104e-17
Identity = 44/92 (47.83%), Postives = 56/92 (60.87%), Query Frame = 1
Query:  364 SLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXTYXRNGTSAAIQYGTGAISGFFS 639
            SL D     V ++NF++AQYF E+S+GTP Q F V+ DTGSSNLWVP + C  S+              TY  NGT  AI+YG+G +SGF S
Sbjct:   66 SLNDMSRHDVLVDNFLNAQYFSEISLGTPPQKFKVVLDTGSSNLWVPGSDC-SSIACFLHNKYDSSASSTYKANGTEFAIKYGSGELSGFVS 156          
The following BLAST results are available for this feature:
BLAST of FC876410 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 86
Match NameE-valueIdentityDescription
CATD_DICDI1.028e-1743.24Cathepsin D OS=Dictyostelium discoideum GN=ctsD PE... [more]
CATEB_XENLA1.343e-1739.23Cathepsin E-B OS=Xenopus laevis GN=ctse-B PE=2 SV=... [more]
CATEA_XENLA1.754e-1737.32Cathepsin E-A OS=Xenopus laevis GN=ctse-A PE=1 SV=... [more]
CARP_NANOT2.291e-1751.81Vacuolar protease A OS=Nannizzia otae (strain CBS ... [more]
ASPP_AEDAE2.291e-1748.78Lysosomal aspartic protease OS=Aedes aegypti GN=AA... [more]
RENI_CALJA2.992e-1748.28Renin OS=Callithrix jacchus GN=REN PE=2 SV=1[more]
CATD_SHEEP2.992e-1750.00Cathepsin D (Fragment) OS=Ovis aries GN=CTSD PE=1 ... [more]
CATD_BOVIN2.992e-1750.00Cathepsin D OS=Bos taurus GN=CTSD PE=1 SV=2[more]
RENI_RAT3.908e-1734.21Renin OS=Rattus norvegicus GN=Ren1 PE=2 SV=2[more]
CARP_ASPFU5.104e-1747.83Vacuolar protease A OS=Aspergillus fumigatus GN=pe... [more]

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Properties
Property NameValue
Genbank descriptionC32004D11EF DevOvary1 Citrus clementina cDNA clone C32004D11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876410 ID=FC876410; Name=FC876410; organism=Citrus clementina; type=EST; length=639bp
GAAAACAATTCAAACTCGAATTAACGGCCAAAGCACATACTCCAGAAACG
CATTTTATTCGCTTTTCTTTCTTTATTCTGACCCTCGATTTCTCGGTCTC
GTCAGTCCACTTCTTTACTCTGTCTGTGCTCTTTTGAAAGATACTCAGTT
GTCGACATGGGAACCAAATTCACAGCCATTCGGGTTGCACTTTTTCTTTT
TCTCATTTTGTCCCCTGCGGCCTTTGCTTTGCCAAATGATGGATTGGTAA
GAATTGGGCTGAGAAAGAAGAAATTGGATCAGATCAATCGCCTTGTTGGA
CAGACTGTATCTAAGGAAGAGGAAACGATGAGAACACCTGTCAGAAGATA
TAATCTCCATGGTAGTCTTGGAGATTCTGATACTGATATTGTTGCATTAA
ATAACTTTATGGATGCTCAGTATTTTGGGGAGGTTAGTATTGGCACACCT
TCCCAGACCTTCACTGTGATATTTGACACAGGAAGTTCTAATCTTTGGGT
GCCTTCTGCGAAGTGTTATTTCTCAGTTTCTTGCTATTTCCACTCCAAGT
ATAAGTCCAGCCATTCAAGTACCTACNAAAGGAATGGGACATCTGCCGCA
ATCCAATATGGGACTGGAGCAATTTCTGGTTTCTTTAGC
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