FC876410

Overview
NameFC876410
Unique NameFC876410
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length639
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876410 vs. ExPASy Swiss-Prot
Match: CATE_CAVPO (Cathepsin E OS=Cavia porcellus GN=CTSE PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.371e-14
Identity = 40/78 (51.28%), Postives = 49/78 (62.82%), Query Frame = 1
Query:  397 LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXTYXRNGTSAAIQYGTGAISG 630
            L N++D +YFG +SIG+P Q FTVIFDTGSSNLWVPS  C  S               TY   G S +IQYGTG+++G
Sbjct:   66 LINYLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYC-TSPACQTHPVFHPSLSSTYREVGNSFSIQYGTGSLTG 142          
BLAST of FC876410 vs. ExPASy Swiss-Prot
Match: CATE_MOUSE (Cathepsin E OS=Mus musculus GN=Ctse PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.097e-14
Identity = 40/78 (51.28%), Postives = 48/78 (61.54%), Query Frame = 1
Query:  397 LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXTYXRNGTSAAIQYGTGAISG 630
            L N++D +YFG +SIGTP Q FTVIFDTGSSNLWVPS  C  S               TY   G   +IQYGTG+++G
Sbjct:   71 LINYLDMEYFGTISIGTPPQNFTVIFDTGSSNLWVPSVYC-TSPACKAHPVFHPSQSDTYTEVGNHFSIQYGTGSLTG 147          
BLAST of FC876410 vs. ExPASy Swiss-Prot
Match: CARPV_CANAL (Vacuolar aspartic protease OS=Candida albicans GN=APR1 PE=3 SV=3)

HSP 1 Score: 78.5666 bits (192), Expect = 3.097e-14
Identity = 39/81 (48.15%), Postives = 50/81 (61.73%), Query Frame = 1
Query:  397 LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXTYXRNGTSAAIQYGTGAISGFFS 639
            L N+++AQYF E+ IGTP Q F VI DTGSSNLWVPS  C  S+              TY  NG+  +IQYG+G++ G+ S
Sbjct:   96 LTNYLNAQYFTEIQIGTPGQPFKVILDTGSSNLWVPSQDC-TSLACFLHAKYDHDASSTYKVNGSEFSIQYGSGSMEGYIS 175          
BLAST of FC876410 vs. ExPASy Swiss-Prot
Match: PEPA3_RABIT (Pepsin-3 OS=Oryctolagus cuniculus PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.044e-14
Identity = 38/79 (48.10%), Postives = 48/79 (60.76%), Query Frame = 1
Query:  397 LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXTYXRNGTSAAIQYGTGAISGF 633
            L N++D +YFG + IGTP+Q FTVIFDTGSSNLWVPS  C  S               T+     S +I YGTG+++GF
Sbjct:   67 LENYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYC-SSAACSVHNQFNPEDSSTFQATSESLSITYGTGSMTGF 144          
BLAST of FC876410 vs. ExPASy Swiss-Prot
Match: PEPA2_RABIT (Pepsin II-2/3 OS=Oryctolagus cuniculus PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.044e-14
Identity = 38/79 (48.10%), Postives = 50/79 (63.29%), Query Frame = 1
Query:  394 ALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXTYXRNGTSAAIQYGTGAISG 630
            ++ N++DA+YFG +SIGTP Q FTVIFDTGSSNLWVPS  C  S+              TY     + +I YGTG+++G
Sbjct:   66 SMENYLDAEYFGTISIGTPPQDFTVIFDTGSSNLWVPSTYC-SSLACALHKRFNPEDSSTYQGTSETLSITYGTGSMTG 143          
BLAST of FC876410 vs. ExPASy Swiss-Prot
Match: PEPA1_RABIT (Pepsin II-1 OS=Oryctolagus cuniculus PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.282e-14
Identity = 38/79 (48.10%), Postives = 50/79 (63.29%), Query Frame = 1
Query:  394 ALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXTYXRNGTSAAIQYGTGAISG 630
            +L N++DA+YFG +SIGTP Q FTVIFDTGSSNLWVPS  C  S+              T+     + +I YGTG+++G
Sbjct:   66 SLENYLDAEYFGTISIGTPPQEFTVIFDTGSSNLWVPSTYC-SSLACFLHKRFNPDDSSTFQATSETLSITYGTGSMTG 143          
BLAST of FC876410 vs. ExPASy Swiss-Prot
Match: PLM1_PLAFA (Plasmepsin-1 OS=Plasmodium falciparum PE=1 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.177e-13
Identity = 49/171 (28.65%), Postives = 82/171 (47.95%), Query Frame = 1
Query:  190 LFLFLILSPAAFALPNDGLVRIGLRKKKLDQINR-----LVGQTVSKEEETMRTPVRRYNLHGSLGDS----------------DTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXTYXRNGTSAAIQYGTGAISGFFS 639
            +F FL+++ A F    D +  +  + KK+++I       ++G ++    + +   V+++ L   + +S                  D V LN+  +  Y+GE  IG   Q F  IFDTGS+NLWVPSA+C  ++              TY ++GT   + Y +G +SGFFS
Sbjct:   43 VFFFLLITGALFYYLIDNV--LFPKNKKINEIMNTSKHVIIGFSIENSHDRIMKTVKQHRLKNYIKESLKFFKTGLTQKPHLGNAGDSVTLNDVANVMYYGEAQIGDNKQKFAFIFDTGSANLWVPSAQCN-TIGCKTKNLYDSNKSKTYEKDGTKVEMNYVSGTVSGFFS 210          
BLAST of FC876410 vs. ExPASy Swiss-Prot
Match: PLM1_PLAF7 (Plasmepsin-1 OS=Plasmodium falciparum (isolate 3D7) GN=PF14_0076 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.177e-13
Identity = 49/171 (28.65%), Postives = 82/171 (47.95%), Query Frame = 1
Query:  190 LFLFLILSPAAFALPNDGLVRIGLRKKKLDQINR-----LVGQTVSKEEETMRTPVRRYNLHGSLGDS----------------DTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXTYXRNGTSAAIQYGTGAISGFFS 639
            +F FL+++ A F    D +  +  + KK+++I       ++G ++    + +   V+++ L   + +S                  D V LN+  +  Y+GE  IG   Q F  IFDTGS+NLWVPSA+C  ++              TY ++GT   + Y +G +SGFFS
Sbjct:   43 VFFFLLITGALFYYLIDNV--LFPKNKKINEIMNTSKHVIIGFSIENSHDRIMKTVKQHRLKNYIKESLKFFKTGLTQKPHLGNAGDSVTLNDVANVMYYGEAQIGDNKQKFAFIFDTGSANLWVPSAQCN-TIGCKTKNLYDSNKSKTYEKDGTKVEMNYVSGTVSGFFS 210          
BLAST of FC876410 vs. ExPASy Swiss-Prot
Match: PEPE_CHICK (Embryonic pepsinogen OS=Gallus gallus PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.177e-13
Identity = 56/149 (37.58%), Postives = 74/149 (49.66%), Query Frame = 1
Query:  202 LILSPAAFALPNDGLVRIGL-RKKKLDQINRLVGQTVSKEEETMRTPVRRYNLHGSLGDSDTDIVA-----LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXTYXRNGTSAAIQYGTGAISG 630
            L L  A  AL +DG+ R+ L R KKL +I R  G      +        RY++      +  D++      L N +D +Y+G +SIGTP Q FTV+FDTGSSNLWVPS  C  S               TY   G + +I YGTG + G
Sbjct:    4 LALLCAVLAL-SDGITRLPLERGKKLREILREKGLLHHFLQH------HRYDIGTKFPHAFPDVLTVVTEPLLNTLDMEYYGTISIGTPPQDFTVVFDTGSSNLWVPSVSC-TSPACQSHQMFNPSQSSTYKSTGQNLSIHYGTGDMEG 144          
BLAST of FC876410 vs. ExPASy Swiss-Prot
Match: PEPC_CAVPO (Gastricsin OS=Cavia porcellus GN=PGC PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.177e-13
Identity = 36/78 (46.15%), Postives = 50/78 (64.10%), Query Frame = 1
Query:  403 NFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXTYXRNGTSAAIQYGTGAISGFF 636
            ++MDA YFG++S+GTP Q+F V+FDTGSSNLWVPS  C  S+              TY     S +++YGTG+++G F
Sbjct:   73 SYMDAAYFGQISLGTPPQSFQVLFDTGSSNLWVPSVYC-SSLACTTHTRFNPRDSSTYVATDQSFSLEYGTGSLTGVF 149          
The following BLAST results are available for this feature:
BLAST of FC876410 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 86
Match NameE-valueIdentityDescription
CATE_CAVPO2.371e-1451.28Cathepsin E OS=Cavia porcellus GN=CTSE PE=1 SV=1[more]
CATE_MOUSE3.097e-1451.28Cathepsin E OS=Mus musculus GN=Ctse PE=1 SV=1[more]
CARPV_CANAL3.097e-1448.15Vacuolar aspartic protease OS=Candida albicans GN=... [more]
PEPA3_RABIT4.044e-1448.10Pepsin-3 OS=Oryctolagus cuniculus PE=2 SV=1[more]
PEPA2_RABIT4.044e-1448.10Pepsin II-2/3 OS=Oryctolagus cuniculus PE=2 SV=1[more]
PEPA1_RABIT5.282e-1448.10Pepsin II-1 OS=Oryctolagus cuniculus PE=2 SV=1[more]
PLM1_PLAFA1.177e-1328.65Plasmepsin-1 OS=Plasmodium falciparum PE=1 SV=2[more]
PLM1_PLAF71.177e-1328.65Plasmepsin-1 OS=Plasmodium falciparum (isolate 3D7... [more]
PEPE_CHICK1.177e-1337.58Embryonic pepsinogen OS=Gallus gallus PE=2 SV=1[more]
PEPC_CAVPO1.177e-1346.15Gastricsin OS=Cavia porcellus GN=PGC PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC32004D11EF DevOvary1 Citrus clementina cDNA clone C32004D11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876410 ID=FC876410; Name=FC876410; organism=Citrus clementina; type=EST; length=639bp
GAAAACAATTCAAACTCGAATTAACGGCCAAAGCACATACTCCAGAAACG
CATTTTATTCGCTTTTCTTTCTTTATTCTGACCCTCGATTTCTCGGTCTC
GTCAGTCCACTTCTTTACTCTGTCTGTGCTCTTTTGAAAGATACTCAGTT
GTCGACATGGGAACCAAATTCACAGCCATTCGGGTTGCACTTTTTCTTTT
TCTCATTTTGTCCCCTGCGGCCTTTGCTTTGCCAAATGATGGATTGGTAA
GAATTGGGCTGAGAAAGAAGAAATTGGATCAGATCAATCGCCTTGTTGGA
CAGACTGTATCTAAGGAAGAGGAAACGATGAGAACACCTGTCAGAAGATA
TAATCTCCATGGTAGTCTTGGAGATTCTGATACTGATATTGTTGCATTAA
ATAACTTTATGGATGCTCAGTATTTTGGGGAGGTTAGTATTGGCACACCT
TCCCAGACCTTCACTGTGATATTTGACACAGGAAGTTCTAATCTTTGGGT
GCCTTCTGCGAAGTGTTATTTCTCAGTTTCTTGCTATTTCCACTCCAAGT
ATAAGTCCAGCCATTCAAGTACCTACNAAAGGAATGGGACATCTGCCGCA
ATCCAATATGGGACTGGAGCAATTTCTGGTTTCTTTAGC
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