FC876416
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876416 vs. ExPASy Swiss-Prot
Match: COPA2_PSESM (Copper resistance protein A homolog OS=Pseudomonas syringae pv. tomato GN=copA PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.139e-21 Identity = 54/120 (45.00%), Postives = 71/120 (59.17%), Query Frame = 3 Query: 207 MGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDW 566 M ING PGP +R R GDT+ + + N+L E IHWHGI DG +S I P Y+YRFKV + GTY+YH H G Q +G+YG L++D E EPF Y+ E ++L+DW Sbjct: 66 MTINGGIPGPLLRWREGDTVTLRVKNRL-DETTSIHWHGIILPAN--MDGVPGLSFDGIAPDGMYVYRFKVRQHGTYWYHSHSGFQEQSGVYGPLVIDAK--EPEPFTYEREHVVMLTDW 180
BLAST of FC876416 vs. ExPASy Swiss-Prot
Match: LAC1_TRAVI (Laccase-1 OS=Trametes villosa GN=LCC1 PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.488e-21 Identity = 57/138 (41.30%), Postives = 76/138 (55.07%), Query Frame = 3 Query: 180 SPDCKESIVMGINGQFPGPTIRARAGDTIAVE----LTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKV-DKAGTYFYHGHLGMQRSAGLYGSLIV-DVADGEKEPFHYDGEFNLL-LSDWWH 572 SPD + +NG PGP I GD + LTN + IHWHG Q GT WADG A I+QCPI+ G ++LY F+V D+AGT++YH HL Q GL G +V D D + + D + ++ L DW+H Sbjct: 37 SPDGFSRQAVVVNGGTPGPLITGNMGDRFQLNVIDNLTNHTMVKSTSIHWHGFFQKGTNWADGPAFINQCPISSGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPAADLYDVDNDDTVITLVDWYH 174
BLAST of FC876416 vs. ExPASy Swiss-Prot
Match: LAC1_AGABI (Laccase-1 OS=Agaricus bisporus GN=lcc1 PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.538e-21 Identity = 59/165 (35.76%), Postives = 92/165 (55.76%), Query Frame = 3 Query: 99 LMLCSVFETSYGSKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYT----EGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKV-DKAGTYFYHGHLGMQRSAGLYGSLIV-DVADGEKEPFHYDGEFNLL-LSDWWH 572 L+L + +S +KTR + +++ +PD E + ING+FPG I+ GD++ + L NKL + V IHWHG Q T DG + ++QCP P T+ Y F V +++GT++YH HL Q GL G+ IV D D + + D E ++ L++W+H Sbjct: 7 LVLVAACISSVVAKTRTFDFDLVNTRLAPDGFERDTVVINGEFPGTLIQVNKGDSVRIPLHNKLTSPTMRRSVSIHWHGFFQARTSGQDGPSFVNQCPQPPNTTFTYEFSVAEQSGTFWYHSHLSTQYCDGLRGAFIVYDPRDPLRHLYDVDDESTVITLAEWYH 171
BLAST of FC876416 vs. ExPASy Swiss-Prot
Match: LAC2_TRAVE (Laccase-2 OS=Trametes versicolor GN=LCC2 PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.329e-21 Identity = 58/140 (41.43%), Postives = 78/140 (55.71%), Query Frame = 3 Query: 180 SPD--CKESIVMGINGQFPGPTIRARAGDTIAVE----LTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKV-DKAGTYFYHGHLGMQRSAGLYGSLIV-DVADGEKEPFHYDGEFNLL-LSDWWH 572 SPD +++IV +NG P P I + GD + LTN + IHWHG Q GT WADG A ++QCPI G ++LY F V D+AGT++YH HL Q GL G +V D D + D E ++ L+DW+H Sbjct: 36 SPDGFLRDAIV--VNGVVPSPLITGKKGDRFQLNVDDTLTNHSMLKSTSIHWHGFFQAGTNWADGPAFVNQCPIASGHSFLYDFHVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPKDPHASRYDVDNESTVITLTDWYH 173
BLAST of FC876416 vs. ExPASy Swiss-Prot
Match: LAC3_THACU (Laccase-3 OS=Thanatephorus cucumeris GN=LCC3 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 5.653e-21 Identity = 60/167 (35.93%), Postives = 89/167 (53.29%), Query Frame = 3 Query: 99 LMLCSVFETSYGSKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVV----IHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKV-DKAGTYFYHGHLGMQRSAGLYGSLIV-DVADGEKEPFHYDGEFN-LLLSDWWHRS 578 L+ S+F ++ ++T Y ++ +PD E +NG +PGP I A GDT+ V++ NKL + IHWHG+ Q DG A ++QCPI P +Y Y + D+ GTY+YH HL Q GL G L++ D D + + D E L++ DW+H S Sbjct: 7 LVSVSLFVSAVLARTVEYNLKISNGKIAPDGVERDATLVNGGYPGPLIFANKGDTLKVKVQNKLTNPDMYRTTSIHWHGLLQHRNADDDGPAFVTQCPIVPQASYTYTMPLGDQTGTYWYHSHLSSQYVDGLRGPLVIYDPKDPHRRLYDIDDEKTVLIIGDWYHTS 173
BLAST of FC876416 vs. ExPASy Swiss-Prot
Match: LAC2_TRAVI (Laccase-2 OS=Trametes villosa GN=LCC2 PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.259e-20 Identity = 57/140 (40.71%), Postives = 78/140 (55.71%), Query Frame = 3 Query: 180 SPD--CKESIVMGINGQFPGPTIRARAGDTIAVE----LTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKV-DKAGTYFYHGHLGMQRSAGLYGSLIV-DVADGEKEPFHYDGEFNLL-LSDWWH 572 SPD +++IV +NG P P I + GD + LTN + IHWHG Q GT WA+G A ++QCPI G ++LY F V D+AGT++YH HL Q GL G +V D D + D E ++ L+DW+H Sbjct: 36 SPDGFLRDAIV--VNGVVPSPLITGKKGDRFQLNVVDTLTNHSMLKSTSIHWHGFFQAGTNWAEGPAFVNQCPIASGHSFLYDFHVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPKDPHASRYDVDNESTVITLTDWYH 173
BLAST of FC876416 vs. ExPASy Swiss-Prot
Match: LAC1_TRAHI (Laccase OS=Trametes hirsuta PE=1 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.259e-20 Identity = 54/138 (39.13%), Postives = 75/138 (54.35%), Query Frame = 3 Query: 180 SPDCKESIVMGINGQFPGPTIRARAGDTIAVE----LTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKV-DKAGTYFYHGHLGMQRSAGLYGSLIV-DVADGEKEPFHYDGEFNLL-LSDWWH 572 SPD + +N PGP + GD + LTN + IHWHG Q GT WADG A ++QCPI+ G ++LY F+V D+AGT++YH HL Q GL G +V D D + D + ++ L+DW+H Sbjct: 37 SPDGFARQAVVVNNVTPGPLVAGNKGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQKGTNWADGPAFVNQCPISSGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASLYDVDNDDTVITLADWYH 174
BLAST of FC876416 vs. ExPASy Swiss-Prot
Match: LAC1_THACU (Laccase-1 OS=Thanatephorus cucumeris GN=LCC1 PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.645e-20 Identity = 59/167 (35.33%), Postives = 90/167 (53.89%), Query Frame = 3 Query: 99 LMLCSVFETSYGSKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVV----IHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKV-DKAGTYFYHGHLGMQRSAGLYGSLIV-DVADGEKEPFHYDGEFN-LLLSDWWHRS 578 L+ S+F ++ ++T Y ++ +PD + +NG +PGP I A GDT+ V++ NKL + IHWHG+ Q DG + ++QCPI P E+Y Y + D+ GTY+YH HL Q GL G L++ D D + + D E L++ DW+H S Sbjct: 7 LVSVSLFVSAVLARTVEYGLKISDGEIAPDGVKRNATLVNGGYPGPLIFANKGDTLKVKVQNKLTNPEMYRTTSIHWHGLLQHRNADDDGPSFVTQCPIVPRESYTYTIPLDDQTGTYWYHSHLSSQYVDGLRGPLVIYDPKDPHRRLYDVDDEKTVLIIGDWYHES 173
BLAST of FC876416 vs. ExPASy Swiss-Prot
Match: LAC4_THACU (Laccase-4 OS=Thanatephorus cucumeris GN=LCC4 PE=1 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.806e-20 Identity = 59/186 (31.72%), Postives = 93/186 (50.00%), Query Frame = 3 Query: 96 ILMLCSVFETSYGSKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKL----YTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKV-DKAGTYFYHGHLGMQRSAGLYGSLIV-DVADGEKEPFHYDGEFN-LLLSDWWHRSVHEAEVGLSSGHYVGLVS 632 +L L + T + R+YK++++ + +PD + ++ +NG PG I A GDT+ + +TN+L IHWHG+ Q T DG A ++QCPI +Y Y + + GT +YH HL Q GL G L++ D D K + D ++L DW+H E + S + L+S Sbjct: 7 LLPLLAAVSTPAFAAVRNYKFDIKNVNVAPDGFQRPIVSVNGLVPGTLITANKGDTLRINVTNQLTDPSMRRATTIHWHGLFQATTADEDGPAFVTQCPIAQNLSYTYEIPLHGQTGTMWYHAHLASQYVDGLRGPLVIYDPNDPHKSRYDVDDASTVVMLEDWYHTPAPVLEKQMFSTNNTALLS 192
BLAST of FC876416 vs. ExPASy Swiss-Prot
Match: LAC2_THACU (Laccase-2 OS=Thanatephorus cucumeris GN=LCC2 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 3.664e-20 Identity = 55/148 (37.16%), Postives = 80/148 (54.05%), Query Frame = 3 Query: 150 YKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKL----YTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKV-DKAGTYFYHGHLGMQRSAGLYGSLIV-DVADGEKEPFHYDGEFNLL-LSDWWH 572 Y ++V +PD + +NG+FPGP I A GDT+ + + NKL IHWHG+ Q T DG A ++QCPI P E+Y Y + ++ GTY+YH HL Q GL G +++ D D + + D E + L+DW+H Sbjct: 24 YGFDVANGAVAPDGVTRNAVLVNGRFPGPLITANKGDTLKITVRNKLSDPTMRRSTTIHWHGLLQHRTAEEDGPAFVTQCPIPPQESYTYTMPLGEQTGTYWYHSHLSSQYVDGLRGPIVIYDPHDPYRNYYDVDDERTVFTLADWYH 171 The following BLAST results are available for this feature:
BLAST of FC876416 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 90
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876416 ID=FC876416; Name=FC876416; organism=Citrus clementina; type=EST; length=632bpback to top |