FC876421
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876421 vs. ExPASy Swiss-Prot
Match: YHEB_SCHPO (Uncharacterized protein PB2B2.11 OS=Schizosaccharomyces pombe GN=SPBPB2B2.11 PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 7.667e-28 Identity = 79/197 (40.10%), Postives = 114/197 (57.87%), Query Frame = 3 Query: 159 LITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKA--SSNFKFVKGDIAS--ADLVNFLLITESIDTIMH---FAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV----TGQIR---RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPV-IHPWKTCYGP 704 LITG AGFI S+ + + YP++ +DKL Y SN + SK NF+F++ D+A+ L F++ I+ I H FAA++ VD SF + FTKNNI T LLE ++ ++R F+HVSTDEVYGE DE+A V E S+L PT+PY+A+KA ++++ +Y SY + V + YGP Sbjct: 13 LITGGAGFIGSNFLDYAVDKYPDFHFTCIDKLSYVSNYTTVFLSKVLNQPNFRFLEMDLATNYKFLYQFMVEDSEINKITHIINFAAESSVDRSFIDPLYFTKNNILSTQNLLECVRILLGKKEELRNRLNFVHVSTDEVYGEQDENASV--DEKSKLNPTSPYAASKAAVDLIIQSYRYSYKISVTVIRANNVYGP 207
BLAST of FC876421 vs. ExPASy Swiss-Prot
Match: RFBB_ECOLX (dTDP-glucose 4,6-dehydratase OS=Escherichia coli GN=rfbB PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.001e-27 Identity = 76/199 (38.19%), Postives = 106/199 (53.27%), Query Frame = 3 Query: 156 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK--------VTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLL-------PTNPYSATKAGAEMLVMAYGRSYGLP-VIHPWKTCYGP 704 IL+TG AGFI S V +I N + +V +DKL Y NL++L S + F DI A+ +D +MH AA++HVD S F + NI GT+VLLEA + + RF H+STDEVYG+ V ++E QL P++PYSA+KA ++ LV A+ R+YGLP ++ YGP Sbjct: 3 ILVTGGAGFIGSAVVRHIINNTQD-SVVNVDKLTYAGNLESLAEISDSERYSFENADICDAEGDGLYFGQHQLDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSGLDDEKKKNFRFHHISTDEVYGDLPHPDEVNSNETLQLFTETTAYAPSSPYSASKASSDHLVRAWKRTYGLPTIVSNCSNNYGP 200
BLAST of FC876421 vs. ExPASy Swiss-Prot
Match: RFBB_SHIFL (dTDP-glucose 4,6-dehydratase OS=Shigella flexneri GN=rfbB PE=3 SV=2) HSP 1 Score: 122.865 bits (307), Expect = 1.708e-27 Identity = 76/199 (38.19%), Postives = 106/199 (53.27%), Query Frame = 3 Query: 156 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK--------VTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLL-------PTNPYSATKAGAEMLVMAYGRSYGLP-VIHPWKTCYGP 704 IL+TG AGFI S V +I N + +V +DKL Y NL++L S + F DI A ++ + D +MH AA++HVD S F + NI GT+VLLEA + + RF H+STDEVYG+ N+EA L P++PYSA+KA ++ LV A+ R+YGLP ++ YGP Sbjct: 3 ILVTGGAGFIGSAVVRHIINNTQD-SVVNVDKLTYAGNLESLADVSDSERYAFEHADICDAVAMSRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALNDEKKKSFRFHHISTDEVYGDLPHPDEANNNEALPLFTETTAYAPSSPYSASKASSDHLVRAWKRTYGLPTIVTNCSNNYGP 200
BLAST of FC876421 vs. ExPASy Swiss-Prot
Match: RFBB_NEIGO (dTDP-glucose 4,6-dehydratase OS=Neisseria gonorrhoeae GN=rfbB PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.805e-27 Identity = 79/203 (38.92%), Postives = 112/203 (55.17%), Query Frame = 3 Query: 132 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQ--------IRRFIHVSTDEVYGE---TDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP-VIHPWKTCYGP 704 M T KNIL+TG AGFI S V +I+N + +V LDKL Y NL++L + + F + DI ++ + D +MH AA++HVD + G++ EF + NI GT LLEA + Q RF H+STDEVYG+ TD+ E + P++PYSA+KA A+ LV A+ R+Y LP ++ YGP Sbjct: 1 MQTEGKKNILVTGGAGFIGSAVVRHIIQNTRD-SVVNLDKLTYAGNLESLTDIADNPRYAFEQVDICDRAELDRVFAQYRPDAVMHLAAESHVDRAIGSAGEFIRTNIVGTFDLLEAARAYWQQMPSEKREAFRFHHISTDEVYGDLHGTDDLFT----ETTPYAPSSPYSASKAAADHLVRAWQRTYRLPSIVSNCSNNYGP 198
BLAST of FC876421 vs. ExPASy Swiss-Prot
Match: RFBB_NEIMA (dTDP-glucose 4,6-dehydratase OS=Neisseria meningitidis serogroup A GN=rfbB1 PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.491e-27 Identity = 77/197 (39.09%), Postives = 110/197 (55.84%), Query Frame = 3 Query: 150 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQ--------IRRFIHVSTDEVYGE---TDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP-VIHPWKTCYGP 704 + IL+TG AGFI S V +IRN + +V LDKL Y NL++L + + F + DI ++ + D +MH AA++HVD S G++ EF + NI GT LLEA + Q RF H+STDEVYG+ TD+ E + P++PYSA+KA ++ LV A+ R+YGLP ++ YGP Sbjct: 2 RKILVTGGAGFIGSAVVRHIIRNTQD-SVVNLDKLTYAGNLESLTDIADNPRYAFEQVDICDRAELDRVFAQHRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYRQQMPSEKHEAFRFHHISTDEVYGDLSGTDDLFT----ETAPYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGP 193
BLAST of FC876421 vs. ExPASy Swiss-Prot
Match: RMLB_STRMU (dTDP-glucose 4,6-dehydratase OS=Streptococcus mutans GN=rmlB PE=1 SV=2) HSP 1 Score: 119.013 bits (297), Expect = 2.467e-26 Identity = 75/195 (38.46%), Postives = 111/195 (56.92%), Query Frame = 3 Query: 150 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETD-EDAVVGNHEA--------SQLLPTNPYSATKAGAEMLVMAYGRSYGL-PVIHPWKTCYGP 704 KNI++TG AGFI S+ + + N+P+ + VLDKL Y N NL + V GDIA ++LV+ L D I+H+AA++H DNS + F N GT++LLEA + RF HVSTDEVYG+ + + G+ E ++ P++PYS+TKA ++++V A+ RS+G+ I YGP Sbjct: 5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNRANL-EEILGDRVELVVGDIADSELVDKL--AAKADAIVHYAAESHNDNSLKDPSPFIYTNFVGTYILLEAARKYD--IRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGP 194
BLAST of FC876421 vs. ExPASy Swiss-Prot
Match: RFBB_NEIMB (dTDP-glucose 4,6-dehydratase OS=Neisseria meningitidis serogroup B GN=rfbB1 PE=3 SV=2) HSP 1 Score: 118.242 bits (295), Expect = 4.207e-26 Identity = 76/197 (38.58%), Postives = 110/197 (55.84%), Query Frame = 3 Query: 150 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQ--------IRRFIHVSTDEVYGE---TDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP-VIHPWKTCYGP 704 + IL+TG AGFI S V +IRN + +V +DKL Y NL++L + + F + DI ++ + D +MH AA++HVD S G++ EF + NI GT LLEA + Q RF H+STDEVYG+ TD+ E + P++PYSA+KA ++ LV A+ R+YGLP ++ YGP Sbjct: 2 RKILVTGGAGFIGSAVVRHIIRNTRD-AVVNVDKLTYAGNLESLTEVADNPRYAFEQVDICDRAELDRVFAQYRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYWQQMPSEQHEAFRFHHISTDEVYGDLGGTDDLFT----ETAPYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGP 193
BLAST of FC876421 vs. ExPASy Swiss-Prot
Match: RFFG_ECOLI (dTDP-glucose 4,6-dehydratase OS=Escherichia coli (strain K12) GN=rffG PE=1 SV=3) HSP 1 Score: 117.857 bits (294), Expect = 5.495e-26 Identity = 79/197 (40.10%), Postives = 104/197 (52.79%), Query Frame = 3 Query: 150 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV--------TGQIRRFIHVSTDEVYGE---TDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP-VIHPWKTCYGP 704 + ILITG AGFI S + R I N +VV+DKL Y NL +L P S F F K DI + + D +MH AA++HVD S F + NI GT+ LLEA + RF H+STDEVYG+ TD+ E + P++PYSA+KA ++ LV A+ R+YGLP +I YGP Sbjct: 2 RKILITGGAGFIGSALV-RYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFT----ETTPYAPSSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGP 193
BLAST of FC876421 vs. ExPASy Swiss-Prot
Match: RFBB_SALTY (dTDP-glucose 4,6-dehydratase OS=Salmonella typhimurium GN=rfbB PE=1 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.495e-26 Identity = 74/199 (37.19%), Postives = 106/199 (53.27%), Query Frame = 3 Query: 156 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK----VTGQIR----RFIHVSTDEVYGETDEDAVVGNH-------EASQLLPTNPYSATKAGAEMLVMAYGRSYGLP-VIHPWKTCYGP 704 ILITG AGFI S V +I+N + +V +DKL Y NL++L S+ + F DI + + + D +MH AA++HVD S F + NI GT+ LLE + G+ + RF H+STDEVYG+ V N E + P++PYSA+KA ++ LV A+ R+YGLP ++ YGP Sbjct: 3 ILITGGAGFIGSAVVRHIIKNTQD-TVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGP 200
BLAST of FC876421 vs. ExPASy Swiss-Prot
Match: RFBB_ECOLI (dTDP-glucose 4,6-dehydratase OS=Escherichia coli (strain K12) GN=rfbB PE=3 SV=2) HSP 1 Score: 117.857 bits (294), Expect = 5.495e-26 Identity = 75/199 (37.69%), Postives = 102/199 (51.26%), Query Frame = 3 Query: 156 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR--------RFIHVSTDEVYGETDEDAVVGNHEASQLL-------PTNPYSATKAGAEMLVMAYGRSYGLP-VIHPWKTCYGP 704 IL+TG AGFI S V +I N + +V +DKL Y N ++L S + F DI A + + D +MH AA++HVD S F + NI GT+VLLEA + RF H+STDEVYG+ V N E L P++PYSA+KA ++ LV A+ R+YGLP ++ YGP Sbjct: 3 ILVTGGAGFIGSAVVRHIINNTQD-SVVNVDKLTYAGNRESLADVSDSERYVFEHADICDAPAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDSDKKNSFRFHHISTDEVYGDLPHPDEVNNTEELPLFTETTAYAPSSPYSASKASSDHLVRAWKRTYGLPTIVTNCSNNYGP 200 The following BLAST results are available for this feature:
BLAST of FC876421 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 68
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876421 ID=FC876421; Name=FC876421; organism=Citrus clementina; type=EST; length=706bpback to top |