FC876421
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876421 vs. ExPASy Swiss-Prot
Match: GALE_ECOLI (UDP-glucose 4-epimerase OS=Escherichia coli (strain K12) GN=galE PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.166e-14 Identity = 50/165 (30.30%), Postives = 88/165 (53.33%), Query Frame = 3 Query: 156 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFK---FVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLV 641 +L+TG +G+I SH C +L++N + +++LD L C++ ++++P K FV+GDI + L+ +L +IDT++HFA V S E+ NN+ GT L+ A + ++ FI S+ VYG+ + V + P +PY +K E ++ Sbjct: 3 VLVTGGSGYIGSHTCVQLLQN--GHDVIILDNL--CNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMR-AANVKNFIFSSSATVYGDQPKIPYVESFPTG--TPQSPYGKSKLMVEQIL 160
BLAST of FC876421 vs. ExPASy Swiss-Prot
Match: GALE_SALTY (UDP-glucose 4-epimerase OS=Salmonella typhimurium GN=galE PE=3 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 3.694e-14 Identity = 50/165 (30.30%), Postives = 87/165 (52.73%), Query Frame = 3 Query: 156 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFK---FVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLV 641 +L+TG +G+I SH C +L++N + +V+LD L C++ ++++P K FV+GDI + L+ +L +IDT++HFA V S E+ NN+ GT L+ A + ++ I S+ VYG+ + V + P +PY +K E ++ Sbjct: 3 VLVTGGSGYIGSHTCVQLLQN--GHDVVILDNL--CNSKRSVLPVIERLGGKHPTFVEGDIRNEALITEILHDHAIDTVIHFAGLKAVGESVARPLEYYDNNVNGTLRLVSAMR-AANVKNLIFSSSATVYGDQPKIPYVESFPTG--TPQSPYGKSKLMVEQIL 160
BLAST of FC876421 vs. ExPASy Swiss-Prot
Match: GALE_SALTI (UDP-glucose 4-epimerase OS=Salmonella typhi GN=galE PE=3 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 3.694e-14 Identity = 50/165 (30.30%), Postives = 87/165 (52.73%), Query Frame = 3 Query: 156 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFK---FVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLV 641 +L+TG +G+I SH C +L++N + +V+LD L C++ ++++P K FV+GDI + L+ +L +IDT++HFA V S E+ NN+ GT L+ A + ++ I S+ VYG+ + V + P +PY +K E ++ Sbjct: 3 VLVTGGSGYIGSHTCVQLLQN--GHDVVILDNL--CNSKRSVLPVIERLGGKHPTFVEGDIRNEALITEILHDHAIDTVIHFAGLKAVGESVAKPLEYYDNNVNGTLRLVSAMR-AANVKNLIFSSSATVYGDQPKIPYVESFPTG--TPQSPYGKSKLMVEQIL 160
BLAST of FC876421 vs. ExPASy Swiss-Prot
Match: GALE_CORDI (UDP-glucose 4-epimerase OS=Corynebacterium diphtheriae GN=galE PE=3 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 3.694e-14 Identity = 52/170 (30.59%), Postives = 93/170 (54.71%), Query Frame = 3 Query: 156 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYG 665 +L+TG AG++ S VC+ ++ +++ ++D L + ++ +P A+ FV+GDI D+ + +L ++S D ++HFAA++ V S E+ ++N+ T LL+A K +R + ST YGE + + E + PTNPY ATK + + +Y +YG Sbjct: 3 LLVTGGAGYVGS-VCSTVLLEQG-HEVTIVDNLT--TGNRDAVPLGAT----FVEGDIK--DVADNVLSSDSFDAVLHFAARSLVGESVEKPDEYWQHNMVTTLALLDAMK-RNNVRNIVFSSTAATYGEPETVPIT---EDAPTHPTNPYGATKLSIDYAITSYAHAYG 158
BLAST of FC876421 vs. ExPASy Swiss-Prot
Match: YFNG_BACSU (Putative sugar dehydratase/epimerase yfnG OS=Bacillus subtilis GN=yfnG PE=3 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 4.825e-14 Identity = 52/181 (28.73%), Postives = 84/181 (46.41%), Query Frame = 3 Query: 132 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPV 674 M+ + KN+ +TG G + S++ LI +V D + NL + V+G + ++ L IDT+ H AAQ V + N + NI GT +LEAC+ I+R I S+D+ YG+ + + E L +PY +K+ A+++ Y +YGLPV Sbjct: 1 MSFWKNKNVFVTGCTGLLGSYLVKELIEQGANVTGLVRDHVPQ----SNLYQGEHIKKMNIVRGSLEDLAVIERALGEYEIDTVFHLAAQAIVGVANRNPISTFEANILGTWNILEACRKHPLIKRVIVASSDKAYGDQEN---LPYDENMPLQGKHPYDVSKSCADLISHTYFHTYGLPV 174
BLAST of FC876421 vs. ExPASy Swiss-Prot
Match: GALE_METJA (Putative UDP-glucose 4-epimerase OS=Methanocaldococcus jannaschii GN=MJ0211 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.302e-14 Identity = 60/174 (34.48%), Postives = 86/174 (49.43%), Query Frame = 3 Query: 156 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADL---VNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 668 IL+TG AGFI SH+ ++LI N Y +++LD L + KN I KA +FV DI DL +NF + ++ ++H AAQ +V NS N N+ GT +LE + + S VYGE + V NH + P +PY +K E + Y R YG+ Sbjct: 2 ILVTGGAGFIGSHIVDKLIEN--NYDVIILDNL--TTGNKNNINPKA----EFVNADIRDKDLDEKINF----KDVEVVIHQAAQINVRNSVENPVYDGDINVLGTINILEMMRKYDIDKIVFASSGGAVYGEPNYLPVDENHPIN---PLSPYGLSKYVGEEYIKLYNRLYGI 160
BLAST of FC876421 vs. ExPASy Swiss-Prot
Match: Y1055_METJA (Uncharacterized protein MJ1055 OS=Methanocaldococcus jannaschii GN=MJ1055 PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.230e-14 Identity = 55/181 (30.39%), Postives = 90/181 (49.72%), Query Frame = 3 Query: 150 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSN-----LKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVI 677 KNIL+TG+AGFI H+ L+ NY + K++ +D L+ N +N I K N+ F+K D + D + L + ID I+H AQ V S N + + K+N GT + E + I + ++ S+ VYG + + + P + Y++TK E++ Y YG+ +I Sbjct: 4 KNILVTGSAGFIGFHLSKYLMDNYEDLKVIGIDNLNNYYNPVLKEKRNEI-LKNYENYTFIKLDFSDWDDLVENLKDKEIDLIVHLGAQAGVRYSLQNPWAYIKSNEMGTLNIFEFAR-RFDIEKVVYASSSSVYGGNRKIPFSEDDRVDK--PISLYASTKRSNELMAHVYHHLYGIKMI 180
BLAST of FC876421 vs. ExPASy Swiss-Prot
Match: ARAE1_ARATH (UDP-arabinose 4-epimerase 1 OS=Arabidopsis thaliana GN=MUR4 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.230e-14 Identity = 51/180 (28.33%), Postives = 88/180 (48.89%), Query Frame = 3 Query: 153 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSN-----LKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVI 677 ++L+TG AG+I SH RL++ Y++ ++D L + L+ L P +F+ D+ A VN + + D +MHFAA +V S ++ N T V+LE G ++ I+ ST YGE D ++ E + +P NPY K AE +++ + ++ + V+ Sbjct: 72 HVLVTGGAGYIGSHAALRLLKE--SYRVTIVDNLSRGNLAAVRILQELFPEPG--RLQFIYADLGDAKAVNKIFTENAFDAVMHFAAVAYVGESTQFPLKYYHNITSNTLVVLETMAAHG-VKTLIYSSTCATYGEPD---IMPITEETPQVPINPYGKAKKMAEDIILDFSKNSDMAVM 243
BLAST of FC876421 vs. ExPASy Swiss-Prot
Match: GALE_YERPE (UDP-glucose 4-epimerase OS=Yersinia pestis GN=galE PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.075e-13 Identity = 51/165 (30.91%), Postives = 82/165 (49.70%), Query Frame = 3 Query: 156 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNL---IPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLV 641 +L+TG +G+I SH C +LI YK V+LD L C++ ++ I S + GDI L++ + I ++HFA V S E+ NN++GT VLLEA + Q++ I S+ VYG+ + V + P++PY +K E ++ Sbjct: 3 VLVTGGSGYIGSHTCVQLIE--AGYKPVILDNL--CNSKSSVLARIHSLTGYTPELYAGDIRDRTLLDSIFAAHPIHAVIHFAGLKAVGESVNRPLEYYNNNVFGTLVLLEAMR-AAQVKNLIFSSSATVYGDQPQIPYVESFPTGS--PSSPYGRSKLMVEQIL 160
BLAST of FC876421 vs. ExPASy Swiss-Prot
Match: GALE_BACSU (UDP-glucose 4-epimerase OS=Bacillus subtilis GN=galE PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.075e-13 Identity = 50/163 (30.67%), Postives = 79/163 (48.47%), Query Frame = 3 Query: 156 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCS-NLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLV 641 IL+TG AG+I SH C L+ + Y+IVVLD L S N + + F + D+ + V+ + I+ ++HFA V S ++ NN+ GT +L EA + G +++ + S+ VYG + + E L TNPY TK E ++ Sbjct: 3 ILVTGGAGYIGSHTCVELLNS--GYEIVVLDNLSNSSAEALNRVKEITGKDLTFYEADLLDREAVDSVFAENEIEAVIHFAGLKAVGESVAIPLKYYHNNLTGTFILCEAMEKYG-VKKIVFSSSATVYGVPETSPIT---EDFPLGATNPYGQTKLMLEQIL 159 The following BLAST results are available for this feature:
BLAST of FC876421 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 68
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876421 ID=FC876421; Name=FC876421; organism=Citrus clementina; type=EST; length=706bpback to top |