FC876424

Overview
NameFC876424
Unique NameFC876424
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length673
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876424 vs. ExPASy Swiss-Prot
Match: KIF1A_HUMAN (Kinesin-like protein KIF1A OS=Homo sapiens GN=KIF1A PE=2 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 5.169e-23
Identity = 71/194 (36.60%), Postives = 102/194 (52.58%), Query Frame = 3
Query:   51 VPGLTEAQVYGTEEVWELLKSGARVRSVGSTNANELSSRSHCLLRVTVK-----GENLINGQKTKSHLWLVDLAGSERVGKIEVDGERLKESQFINKSLSALGDVISALA------------SKSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETPCSLNFASRVRGIESGPARKQSDISELFK 581
            V  L++  V    ++ +L+ SG + R+V +TN NE SSRSH +  +         E  I  +K  S + LVDLAGSER       G RLKE   INKSL+ LG VISALA             K+  IPYR+S LT +L+ +LGG+ +T M   +SP+  +  ET  +L +A R + I       +   ++L +
Sbjct:  178 VEDLSKLAVTSYNDIQDLMDSGNKARTVAATNMNETSSRSHAVFNIIFTQKRHDAETNITTEKV-SKISLVDLAGSERADSTGAKGTRLKEGANINKSLTTLGKVISALAEMDSGPNKNKKKKKTDFIPYRDSVLTWLLRENLGGNSRTAMVAALSPADINYDETLSTLRYADRAKQIRCNAVINEDPNNKLIR 370          
BLAST of FC876424 vs. ExPASy Swiss-Prot
Match: KIF1C_HUMAN (Kinesin-like protein KIF1C OS=Homo sapiens GN=KIF1C PE=1 SV=3)

HSP 1 Score: 107.457 bits (267), Expect = 6.751e-23
Identity = 69/171 (40.35%), Postives = 99/171 (57.89%), Query Frame = 3
Query:   51 VPGLTEAQVYGTEEVWELLKSGARVRSVGSTNANELSSRSHCLLRV--TVKGENLINGQKTK--SHLWLVDLAGSERVGKIEVDGERLKESQFINKSLSALGDVISALAS------KSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETPCSLNFASRVRGI 533
            V  L++  V    ++ +L+  G + R+V +TN NE SSRSH +  +  T +  + + G  ++  S + LVDLAGSER       G RLKE   INKSL+ LG VISALA       KS  IPYR+S LT +L+ +LGG+ +T M   +SP+  +  ET  +L +A R + I
Sbjct:  178 VQDLSKLAVTSYADIADLMDCGNKARTVAATNMNETSSRSHAVFTIVFTQRCHDQLTGLDSEKVSKISLVDLAGSERADSSGARGMRLKEGANINKSLTTLGKVISALADMQSKKRKSDFIPYRDSVLTWLLKENLGGNSRTAMIAALSPADINYEETLSTLRYADRTKQI 348          
BLAST of FC876424 vs. ExPASy Swiss-Prot
Match: KIF22_HUMAN (Kinesin-like protein KIF22 OS=Homo sapiens GN=KIF22 PE=1 SV=5)

HSP 1 Score: 107.071 bits (266), Expect = 8.818e-23
Identity = 65/171 (38.01%), Postives = 97/171 (56.73%), Query Frame = 3
Query:   51 VPGLTEAQVYGTEEVWELLKSGARVRSVGSTNANELSSRSHCLLRVTV-KGENLINGQKTKSHLWLVDLAGSERVGKIEVDGERLKESQFINKSLSALGDVISALASKSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETPCSLNFASRVRGIESGPARKQS 560
            +PGL++  +    +        +R R+VG+T  N+ SSRSH +L V V + E L   ++ +  L+L+DLAGSE   +    G RLKES  IN SL  LG V+ AL      +PYR+SKLT +LQ SLGG   +++   I+P      +T  +LNFA+R + + + P   +S
Sbjct:  207 IPGLSQKPISSFADFERHFLPASRNRTVGATRLNQRSSRSHAVLLVKVDQRERLAPFRQREGKLYLIDLAGSEDNRRTGNKGLRLKESGAINTSLFVLGKVVDALNQGLPRVPYRDSKLTRLLQDSLGGSAHSILIANIAPERRFYLDTVSALNFAARSKEVINRPFTNES 377          
BLAST of FC876424 vs. ExPASy Swiss-Prot
Match: KIF1C_RAT (Kinesin-like protein KIF1C OS=Rattus norvegicus GN=Kif1c PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 8.818e-23
Identity = 70/190 (36.84%), Postives = 104/190 (54.74%), Query Frame = 3
Query:   51 VPGLTEAQVYGTEEVWELLKSGARVRSVGSTNANELSSRSHCLLRV--TVKGENLINGQKTK--SHLWLVDLAGSERVGKIEVDGERLKESQFINKSLSALGDVISALAS------KSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETPCSLNFASRVRGIESGPARKQSDISELFKYKQ 590
            V  L++  V    ++ +L+  G + R+V +TN NE SSRSH +  +  T +  + + G  ++  S + LV+LAGSER       G RLKE   INKSL+ LG VISALA       KS  IPYR+S LT +L+ +LGG+ +T M   +SP+  +  ET  +L +A R + I       +   + L +  Q
Sbjct:  177 VQDLSKLAVTSYADIADLMDCGNKARTVAATNMNETSSRSHAVFTIVFTQRSHDQLTGLDSEKVSKISLVNLAGSERADSSGARGMRLKEGANINKSLTTLGKVISALADLQSKKRKSDFIPYRDSVLTWLLKENLGGNSRTAMIAALSPADINYEETLSTLRYADRTKQIRCNAVINEDPNARLIRELQ 366          
BLAST of FC876424 vs. ExPASy Swiss-Prot
Match: KIF1B_RAT (Kinesin-like protein KIF1B OS=Rattus norvegicus GN=Kif1b PE=1 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.152e-22
Identity = 73/203 (35.96%), Postives = 110/203 (54.19%), Query Frame = 3
Query:   51 VPGLTEAQVYGTEEVWELLKSGARVRSVGSTNANELSSRSHCLLRV--TVKGENLINGQKTK--SHLWLVDLAGSERVGKIEVDGERLKESQFINKSLSALGDVISALA------------SKSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETPCSLNFASRVRGIESGPARKQSDISELFK-YKQMAEKLK 608
            V  L++  V    ++ +L+ +G + R+V +TN NE SSRSH +  +  T K ++      T+  S + LVDLAGSER       G RLKE   INKSL+ LG VISALA             K+  IPYR+S LT +L+ +LGG+ +T M   +SP+  +  ET  +L +A R + I+      +   ++L +  K+   +LK
Sbjct:  178 VEDLSKLAVTSYTDIADLMDAGNKARTVAATNMNETSSRSHAVFTIVFTQKKQDPETNLSTEKVSKISLVDLAGSERADSTGAKGTRLKEGANINKSLTTLGKVISALAEVDNCTSKSKKKKKTDFIPYRDSVLTWLLRENLGGNSRTAMVAALSPADINYDETLSTLRYADRAKQIKCNAVINEDPNAKLVRELKEEVTRLK 380          
BLAST of FC876424 vs. ExPASy Swiss-Prot
Match: KIF1B_MOUSE (Kinesin-like protein KIF1B OS=Mus musculus GN=Kif1b PE=1 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.152e-22
Identity = 73/203 (35.96%), Postives = 110/203 (54.19%), Query Frame = 3
Query:   51 VPGLTEAQVYGTEEVWELLKSGARVRSVGSTNANELSSRSHCLLRV--TVKGENLINGQKTK--SHLWLVDLAGSERVGKIEVDGERLKESQFINKSLSALGDVISALA------------SKSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETPCSLNFASRVRGIESGPARKQSDISELFK-YKQMAEKLK 608
            V  L++  V    ++ +L+ +G + R+V +TN NE SSRSH +  +  T K ++      T+  S + LVDLAGSER       G RLKE   INKSL+ LG VISALA             K+  IPYR+S LT +L+ +LGG+ +T M   +SP+  +  ET  +L +A R + I+      +   ++L +  K+   +LK
Sbjct:  178 VEDLSKLAVTSYTDIADLMDAGNKARTVAATNMNETSSRSHAVFTIVFTQKKQDPETNLSTEKVSKISLVDLAGSERADSTGAKGTRLKEGANINKSLTTLGKVISALAEVDNCTSKSKKKKKTDFIPYRDSVLTWLLRENLGGNSRTAMVAALSPADINYDETLSTLRYADRAKQIKCNAVINEDPNAKLVRELKEEVTRLK 380          
BLAST of FC876424 vs. ExPASy Swiss-Prot
Match: KIF1A_MOUSE (Kinesin-like protein KIF1A OS=Mus musculus GN=Kif1a PE=1 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.152e-22
Identity = 70/178 (39.33%), Postives = 97/178 (54.49%), Query Frame = 3
Query:   51 VPGLTEAQVYGTEEVWELLKSGARVRSVGSTNANELSSRSHCLLRVTVK-----GENLINGQKTKSHLWLVDLAGSERVGKIEVDGERLKESQFINKSLSALGDVISALA------------SKSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETPCSLNFASRVRGI 533
            V  L++  V    ++ +L+ SG + R+V +TN NE SSRSH +  +         E  I  +K  S + LVDLAGSER       G RLKE   INKSL+ LG VISALA             K+  IPYR+S LT +L+ +LGG+ +T M   +SP+  +  ET  +L +A R + I
Sbjct:  178 VEDLSKLAVTSYNDIQDLMDSGNKPRTVAATNMNETSSRSHAVFNIIFTQKRHDAETNITTEKV-SKISLVDLAGSERADSTGAKGTRLKEGANINKSLTTLGKVISALAEMDSGPNKNKKKKKTDFIPYRDSVLTWLLRENLGGNSRTAMVAALSPADINYDETLSTLRYADRAKQI 354          
BLAST of FC876424 vs. ExPASy Swiss-Prot
Match: KI16B_HUMAN (Kinesin-like protein KIF16B OS=Homo sapiens GN=KIF16B PE=1 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 1.504e-22
Identity = 70/179 (39.11%), Postives = 98/179 (54.75%), Query Frame = 3
Query:   51 VPGLTEAQVYGTEEVWELLKSGARVRSVGSTNANELSSRSHCLLRVTVKGENLINGQ--KTKSHLWLVDLAGSERVGKIEVDGERLKESQFINKSLSALGDVISALAS------------KSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETPCSLNFASRVRGIESGP 545
            V  L++  V    +V EL+ +G   R+  +T  N++SSRSH +  +        +    +T S + LVDLAGSER       G RLKE   INKSL  LG+VISALA             K   +PYR+S LT +L+ SLGG+ KT+M   ISP+  + GET  +L +A+R + I + P
Sbjct:  184 VEDLSKHLVQNYGDVEELMDAGNINRTTAATGMNDVSSRSHAIFTIKFTQAKFDSEMPCETVSKIHLVDLAGSERADATGATGVRLKEGGNINKSLVTLGNVISALADLSQDAANTLAKKKQVFVPYRDSVLTWLLKDSLGGNSKTIMIATISPADVNYGETLSTLRYANRAKNIINKP 362          
BLAST of FC876424 vs. ExPASy Swiss-Prot
Match: KF22A_XENLA (Kinesin-like protein KIF22-A OS=Xenopus laevis GN=kif22-A PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.964e-22
Identity = 63/171 (36.84%), Postives = 98/171 (57.31%), Query Frame = 3
Query:   51 VPGLTEAQVYGTEEVWELLKSGARVRSVGSTNANELSSRSHCLLRVTV-KGENLINGQKTKSHLWLVDLAGSERVGKIEVDGERLKESQFINKSLSALGDVISALASKSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETPCSLNFASRVRGIESGPARKQS 560
            +PG+T+  +    +  E     ++ R+V ST  N+ SSRSH +L + V K + ++  ++    L+L+DLAGSE   +    G RLKES  IN SL  L  V+ AL      IPYR+SKLT +LQ SLGG   ++M   I+P  +   +T  +LNFA++ + I + P  +++
Sbjct:  198 IPGVTQKMINSFADFDEHFIPASQNRTVASTKLNDRSSRSHAVLLIKVQKSQQVVPFRQLTGKLYLIDLAGSEDNRRTGNQGIRLKESGAINSSLFTLSKVVDALNQGLPRIPYRDSKLTRLLQDSLGGSAHSVMITNIAPEQTYYFDTLTALNFAAKSKQIINKPFSQET 368          
BLAST of FC876424 vs. ExPASy Swiss-Prot
Match: KI59C_DROME (Kinesin-like protein Klp59C OS=Drosophila melanogaster GN=Klp59C PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.566e-22
Identity = 71/193 (36.79%), Postives = 104/193 (53.89%), Query Frame = 3
Query:    3 PKKLEIKQAAEGGTQ-EVPGLTEAQVYGTEEVWELLKSGARVRSVGSTNANELSSRSHCLLRVTVKGENLINGQKTKSHLWLVDLAGSER-VGKIEVDGERLKESQFINKSLSALGDVISALASKSGHIPYRNSKLTHILQSSL--GGDCKTLMFVQISPSSSDLGETPCSLNFASRVR--GIESGPARKQSD 563
            P K +++   +   Q +V GLT+  V  T EV +LL+ G  VR+ G T+AN  SSRSH + ++ ++      G+K      L+DLAG+ER       D +   E   INKSL  L + I AL  +S H+P+R SKLT +L+ S   G   KT M   ISP    +  T  +L +A RV+   +ES P+++  D
Sbjct:  344 PGKPQLRVLEDRNQQVQVVGLTQNPVQNTAEVLDLLELGNSVRTSGHTSANSKSSRSHAVFQIVLRS---AAGEKLHGKFSLIDLAGNERGADNSSADRQTRLEGSEINKSLLVLKECIRALGRQSSHLPFRGSKLTQVLRDSFIGGKKVKTCMIAMISPCLHSVEHTLNTLRYADRVKELSVESIPSKRMPD 533          
The following BLAST results are available for this feature:
BLAST of FC876424 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 195
Match NameE-valueIdentityDescription
KIF1A_HUMAN5.169e-2336.60Kinesin-like protein KIF1A OS=Homo sapiens GN=KIF1... [more]
KIF1C_HUMAN6.751e-2340.35Kinesin-like protein KIF1C OS=Homo sapiens GN=KIF1... [more]
KIF22_HUMAN8.818e-2338.01Kinesin-like protein KIF22 OS=Homo sapiens GN=KIF2... [more]
KIF1C_RAT8.818e-2336.84Kinesin-like protein KIF1C OS=Rattus norvegicus GN... [more]
KIF1B_RAT1.152e-2235.96Kinesin-like protein KIF1B OS=Rattus norvegicus GN... [more]
KIF1B_MOUSE1.152e-2235.96Kinesin-like protein KIF1B OS=Mus musculus GN=Kif1... [more]
KIF1A_MOUSE1.152e-2239.33Kinesin-like protein KIF1A OS=Mus musculus GN=Kif1... [more]
KI16B_HUMAN1.504e-2239.11Kinesin-like protein KIF16B OS=Homo sapiens GN=KIF... [more]
KF22A_XENLA1.964e-2236.84Kinesin-like protein KIF22-A OS=Xenopus laevis GN=... [more]
KI59C_DROME2.566e-2236.79Kinesin-like protein Klp59C OS=Drosophila melanoga... [more]

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Properties
Property NameValue
Genbank descriptionC32004F03EF DevOvary1 Citrus clementina cDNA clone C32004F03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876424 ID=FC876424; Name=FC876424; organism=Citrus clementina; type=EST; length=673bp
CTCCTAAGAAGTTGGAGATAAAGCAAGCAGCAGAAGGTGGTACCCAAGAA
GTGCCAGGACTCACTGAAGCTCAAGTATATGGTACAGAGGAAGTGTGGGA
GCTACTTAAGTCTGGAGCCAGAGTTAGATCTGTTGGATCCACCAATGCCA
ATGAGCTCAGTAGCCGGTCTCACTGCTTGTTGCGAGTAACTGTGAAGGGG
GAGAATCTGATAAATGGGCAGAAGACTAAGAGTCACCTCTGGCTGGTAGA
CTTGGCAGGCAGTGAACGTGTGGGGAAGATTGAAGTTGATGGTGAGAGGT
TGAAGGAATCTCAGTTTATAAATAAATCTCTCTCTGCACTTGGTGATGTT
ATATCTGCTCTGGCATCTAAATCAGGCCACATTCCGTACAGGAACTCGAA
GCTCACTCATATTTTGCAGAGCTCTCTAGGTGGAGATTGCAAGACTCTGA
TGTTTGTCCAGATCAGCCCAAGTTCTTCAGACCTTGGAGAGACCCCTTGT
TCACTGAATTTTGCCAGCCGAGTTCGGGGAATTGAAAGTGGTCCTGCTCG
GAAACAATCAGACATTTCTGAACTTTTTAAGTACAAGCAAATGGCAGAAA
AGTTAAAGCAGGATGAGAAGGAGACGAAGAAGTTGCAGGACAATTTGCAG
TCTGTACAATTAAGGCTCGCTGC
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