FC876424

Overview
NameFC876424
Unique NameFC876424
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length673
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876424 vs. ExPASy Swiss-Prot
Match: KIF4_XENLA (Chromosome-associated kinesin KIF4 OS=Xenopus laevis GN=kif4 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.404e-28
Identity = 80/194 (41.24%), Postives = 113/194 (58.25%), Query Frame = 3
Query:   48 EVPGLTEAQVYGTEEVWELLKSGARVRSVGSTNANELSSRSHCLLRVTVKGENLINGQKT---KSHLWLVDLAGSERVGKIEVDGERLKESQFINKSLSALGDVISAL---ASKSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETPCSLNFASRVRGIESGP-ARKQSDISELFKYKQMAEKLK 608
            ++ GLTE  V    +    L+ G   R+V ST  N  SSRSH +  +++  E    G K    +S L LVDLAGSER  K + +G+RLKE   IN+ L  LG+VISAL   + K G +PYR+SKLT +LQ SLGG+  TLM   +SP+ S++ ET  +L +A R R I++ P        +EL + K   ++L+
Sbjct:  172 KICGLTERDVKTALDTLSCLEQGNSSRTVASTAMNSQSSRSHAIFTISI--EQRKEGDKNNSFRSKLHLVDLAGSERQKKTKAEGDRLKEGISINRGLLCLGNVISALGDESKKGGFVPYRDSKLTRLLQDSLGGNSHTLMIACVSPADSNMEETLNTLRYADRARKIKNKPIVNTDPQAAELQRLKLQVQELQ 363          
BLAST of FC876424 vs. ExPASy Swiss-Prot
Match: KIF4A_HUMAN (Chromosome-associated kinesin KIF4A OS=Homo sapiens GN=KIF4A PE=1 SV=3)

HSP 1 Score: 126.331 bits (316), Expect = 1.404e-28
Identity = 79/191 (41.36%), Postives = 112/191 (58.64%), Query Frame = 3
Query:   48 EVPGLTEAQVYGTEEVWELLKSGARVRSVGSTNANELSSRSHCLLRVTVKGENLINGQKT-KSHLWLVDLAGSERVGKIEVDGERLKESQFINKSLSALGDVISALAS--KSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETPCSLNFASRVRGIESGP-ARKQSDISELFKYKQMAEKLK 608
            ++ GLTE  V    +    L+ G   R+V ST  N  SSRSH +  ++++     +   + +S L LVDLAGSER  K + +G+RLKE   IN+ L  LG+VISAL    K G +PYR+SKLT +LQ SLGG+  TLM   +SP+ S+L ET  +L +A R R I++ P        +EL   KQ  ++L+
Sbjct:  172 KIVGLTEKTVLVALDTVSCLEQGNNSRTVASTAMNSQSSRSHAIFTISLEQRKKSDKNSSFRSKLHLVDLAGSERQKKTKAEGDRLKEGININRGLLCLGNVISALGDDKKGGFVPYRDSKLTRLLQDSLGGNSHTLMIACVSPADSNLEETLNTLRYADRARKIKNKPIVNIDPQTAELNHLKQQVQQLQ 362          
BLAST of FC876424 vs. ExPASy Swiss-Prot
Match: KIF19_MOUSE (Kinesin-like protein KIF19 OS=Mus musculus GN=Kif19 PE=1 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 1.404e-28
Identity = 75/212 (35.38%), Postives = 127/212 (59.91%), Query Frame = 3
Query:   12 LEIKQAAEGGTQEVPGLTEAQVYGTEEVWELLKSGARVRSVGSTNANELSSRSHCLLRVTVKGENLING---QKTKSHLWLVDLAGSERVGKIEVDGERLKESQFINKSLSALGDVISALASKSG--HIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETPCSLNFASRVRGIESGPARKQSDIS-ELFKYKQMAEKLKQDEKETK 629
            LE+++ ++G  Q V G+TE      +E+ +LL  G R R+   T AN+ SSRSH +L+V V+  + +     +  +  L+++DLAGSER  + +  G+R+KE   IN+SL ALG+ I+AL+ K    +I YR+SKLT +L+ SLGG+ +T+M   ISP+S+   E+  +L +A R + I +   +   ++S  + +Y  +   L+ + +  K
Sbjct:  169 LELREDSKGVIQ-VAGITEVSTINAKEIMQLLMKGNRQRTQEPTAANQTSSRSHAVLQVAVRQRSRVKNILQEVRQGRLFMIDLAGSERASQTQNRGQRMKEGAHINRSLLALGNCINALSDKGSNKYINYRDSKLTRLLKDSLGGNSRTVMIAHISPASTAFEESRNTLTYAGRAKNIRTRVKQNLLNVSYHIAQYTSIIADLRGEIQRLK 379          
BLAST of FC876424 vs. ExPASy Swiss-Prot
Match: BIMC_EMENI (Kinesin-like protein bimC OS=Emericella nidulans GN=bimC PE=2 SV=2)

HSP 1 Score: 125.946 bits (315), Expect = 1.834e-28
Identity = 83/212 (39.15%), Postives = 116/212 (54.72%), Query Frame = 3
Query:   51 VPGLTEAQVYGTEEVWELLKSGARVRSVGSTNANELSSRSHCLLRVTVK-------GENLINGQKTKSHLWLVDLAGSERVGKIEVDGERLKESQFINKSLSALGDVISALASKSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETPCSLNFASRVRGIESGPARKQS--DISELFKYKQMAEKLKQDEKETKKLQDNLQSVQ 659
            V G+ E  +       +LL+ G+  R V +T  N+LSSRSH +  +TV        GE  +   K    L LVDLAGSE +G+   + +R  E+  INKSL  LG VI+AL  KS HIPYR SKLT +LQ SLGG  KT +   ISP+ S+L ET  +L++A R + I + P    +   ++ L ++    EKLK +   T+       SV+
Sbjct:  253 VQGMEETYIDSATAGIKLLQQGSHKRQVAATKCNDLSSRSHTVFTITVNIKRTTESGEEYVCPGK----LNLVDLAGSENIGRSGAENKRATEAGLINKSLLTLGRVINALVDKSQHIPYRESKLTRLLQDSLGGRTKTCIIATISPARSNLEETISTLDYAFRAKNIRNKPQINSTMPKMTLLREFTAEIEKLKAELIATRHRNGVYMSVE 460          
BLAST of FC876424 vs. ExPASy Swiss-Prot
Match: KI18B_CHICK (Kinesin-like protein KIF18B OS=Gallus gallus GN=KIF18B PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.129e-28
Identity = 86/223 (38.57%), Postives = 130/223 (58.30%), Query Frame = 3
Query:   12 LEIKQAAEGGTQEVPGLTEAQVYGTEEVWELLKSGARVRSVGSTNANELSSRSHCLLRVTVKGENLINGQKTK---SHLWLVDLAGSERVGKIEVDGERLKESQFINKSLSALGDVISALA---SKSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETPCSLNFASRVRGIE-SGPARKQSDISELFKYKQMAEKLKQDEKETKKLQDNLQSVQ 659
            L I++  E G   V GL+  Q    E++ E+L +G + R+   T+AN  SSRSH + ++ VK ++ + G       + + L+DLAGSER       GERL+E   IN+SL AL +VI+ALA   SK  HIPYR+SKLT +L+ S+GG+C+T+M   +SPSS    +T  +L +A+R + I+ S  +   S    + KY  + E+LK    E   LQ  L++ +
Sbjct:  174 LAIREDPEKGVV-VQGLSFHQPKSAEQLLEMLANGNKNRTQHPTDANATSSRSHAVFQIYVKQQDRVVGLSQDLQVAKMSLIDLAGSERASVTNTKGERLREGANINRSLLALINVINALADAKSKKTHIPYRDSKLTRLLKDSIGGNCRTIMIAAVSPSSLAYEDTYNTLKYANRAKEIKLSLKSNVLSLDCHISKYATICEQLK---TEVADLQAKLRAYE 392          
BLAST of FC876424 vs. ExPASy Swiss-Prot
Match: CUT7_SCHPO (Kinesin-like protein cut7 OS=Schizosaccharomyces pombe GN=cut7 PE=2 SV=3)

HSP 1 Score: 124.79 bits (312), Expect = 4.086e-28
Identity = 77/216 (35.65%), Postives = 117/216 (54.17%), Query Frame = 3
Query:   39 GTQEVPGLTEAQVYGTEEVWELLKSGARVRSVGSTNANELSSRSHCLLRVTVKGE---------------NLINGQKTKSHLWLVDLAGSERVGKIEVDGERLKESQFINKSLSALGDVISALASKSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETPCSLNFASRVRGIESGPARKQSDISELFKYKQMA---EKLKQDEKETKK 632
            G   + G+ E+ +    +   LL+ G+  R V +T  N+LSSRSH +  +T+  +               N  +     S L +VDLAGSE +G+   + +R +E+  IN+SL  LG VI+AL  K+ HIPYR SKLT +LQ SLGG  KT M V +S ++++L ET  +L +A+R + I + P   Q    ++   K +    E+LK D   T+K
Sbjct:  242 GNVVITGIEESYIKNAGDGLRLLREGSHRRQVAATKCNDLSSRSHSIFTITLHRKVSSGMTDETNSLTINNNSDDLLRASKLHMVDLAGSENIGRSGAENKRARETGMINQSLLTLGRVINALVEKAHHIPYRESKLTRLLQDSLGGKTKTSMIVTVSSTNTNLEETISTLEYAARAKSIRNKPQNNQLVFRKVL-IKDLVLDIERLKNDLNATRK 456          
BLAST of FC876424 vs. ExPASy Swiss-Prot
Match: KL61_DROME (Bipolar kinesin KRP-130 OS=Drosophila melanogaster GN=Klp61F PE=1 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 5.337e-28
Identity = 80/198 (40.40%), Postives = 116/198 (58.59%), Query Frame = 3
Query:   39 GTQEVPGLTEAQVYGTEEVWELLKSGARVRSVGSTNANELSSRSHCLLRVTVK-GENLINGQKTKS--HLWLVDLAGSERVGKIEVD-GERLKESQFINKSLSALGDVISALASKSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETPCSLNFASRVRGIESGPA--RKQSDISELFKYKQMAEKLKQD 614
            G+  + GL E  V+  ++V++LL+ G   R   +T  N  SSRSH +  + V   EN I G+       L LVDLAGSE V K   + G R++E+  IN+SL  LG VI+AL  ++ H+PYR SKLT +LQ SLGG  KT +   ISP   D+ ET  +L +A R + I++ P   +K +  + L +Y +  +KLK+D
Sbjct:  188 GSVIIQGLEEIPVHSKDDVYKLLEKGKERRKTATTLMNAQSSRSHTVFSIVVHIRENGIEGEDMLKIGKLNLVDLAGSENVSKAGNEKGIRVRETVNINQSLLTLGRVITALVDRAPHVPYRESKLTRLLQESLGGRTKTSIIATISPGHKDIEETLSTLEYAHRAKNIQNKPEVNQKLTKKTVLKEYTEEIDKLKRD 385          
BLAST of FC876424 vs. ExPASy Swiss-Prot
Match: KIF4_MOUSE (Chromosome-associated kinesin KIF4 OS=Mus musculus GN=Kif4 PE=2 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 6.970e-28
Identity = 77/191 (40.31%), Postives = 111/191 (58.12%), Query Frame = 3
Query:   48 EVPGLTEAQVYGTEEVWELLKSGARVRSVGSTNANELSSRSHCLLRVTVKGENLINGQKT-KSHLWLVDLAGSERVGKIEVDGERLKESQFINKSLSALGDVISALAS--KSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETPCSLNFASRVRGIESGP-ARKQSDISELFKYKQMAEKLK 608
            ++ GLTE  V    +    L+ G   R+V ST  N  SSRSH +  ++++     +   + +S L LVDLAGSER  K + +G+RL+E   IN+ L  LG+VISAL    K   +PYR+SKLT +LQ SLGG+  TLM   +SP+ S+L ET  +L +A R R I++ P        +EL   KQ  ++L+
Sbjct:  173 KIVGLTEKTVLVASDTVSCLEQGNNSRTVASTAMNSQSSRSHAIFTISIEQRKKNDKNSSFRSKLHLVDLAGSERQKKTKAEGDRLREGININRGLLCLGNVISALGDDKKGNFVPYRDSKLTRLLQDSLGGNSHTLMIACVSPADSNLEETLNTLRYADRARKIKNKPIINIDPQAAELNHLKQQVQQLQ 363          
BLAST of FC876424 vs. ExPASy Swiss-Prot
Match: KIF4B_HUMAN (Chromosome-associated kinesin KIF4B OS=Homo sapiens GN=KIF4B PE=1 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 6.970e-28
Identity = 78/191 (40.84%), Postives = 111/191 (58.12%), Query Frame = 3
Query:   48 EVPGLTEAQVYGTEEVWELLKSGARVRSVGSTNANELSSRSHCLLRVTVKGENLINGQKT-KSHLWLVDLAGSERVGKIEVDGERLKESQFINKSLSALGDVISALAS--KSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETPCSLNFASRVRGIESGP-ARKQSDISELFKYKQMAEKLK 608
            ++ GLTE  V    +    L+ G   R+V ST  N  SSRSH +  ++++     +   + +S L LVDLAGSER  K + +G+RLKE   IN+ L  LG+VISAL    K   +PYR+SKLT +LQ SLGG+  TLM   +SP+ S+L ET  +L +A R R I++ P        +EL   KQ  ++L+
Sbjct:  172 KIVGLTEKTVLVALDTVSCLEQGNNSRTVASTAMNSQSSRSHAIFTISIEQRKKSDKNCSFRSKLHLVDLAGSERQKKTKAEGDRLKEGININRGLLCLGNVISALGDDKKGSFVPYRDSKLTRLLQDSLGGNSHTLMIACVSPADSNLEETLSTLRYADRARKIKNKPIVNIDPHTAELNHLKQQVQQLQ 362          
BLAST of FC876424 vs. ExPASy Swiss-Prot
Match: KI18A_MOUSE (Kinesin-like protein KIF18A OS=Mus musculus GN=Kif18a PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 6.970e-28
Identity = 88/235 (37.45%), Postives = 131/235 (55.74%), Query Frame = 3
Query:   12 LEIKQAAEGGTQEVPGLTEAQVYGTEEVWELLKSGARVRSVGSTNANELSSRSHCLLRVTVKGENL---INGQKTKSHLWLVDLAGSERVGKIEVDGERLKESQFINKSLSALGDVISALAS---KSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETPCSLNFASRVR----GIESGPARKQSDISELFKYKQM--------AEKLKQDEKETKKLQDNLQSVQL 662
            L +++ ++ G   V GLT  Q   +EE+ +LL +G + R+   T+ N +SSRSH + ++ ++ ++    IN     + + L+DLAGSER       G R  E   INKSL ALG+VI+ALA+   ++ HIPYRNSKLT +L+ SLGG+C+T+M   +SPSS    +T  +L +A+R +     ++S      S IS+  K   M         EKLK  E E K L D     +L
Sbjct:  177 LAVREDSQKGVV-VQGLTLHQPKSSEEILQLLDNGNKNRTQHPTDVNAVSSRSHAVFQIYLRQQDKTASINQNVRIAKMSLIDLAGSERASVSGAKGSRFVEGTNINKSLLALGNVINALANTKRRNQHIPYRNSKLTRLLKDSLGGNCQTIMIAAVSPSSLFYDDTYNTLKYANRAKEIKSSLKSNVLNLNSHISQYVKICNMQKAEILMLKEKLKAYE-EQKALSDRNDCAKL 409          
The following BLAST results are available for this feature:
BLAST of FC876424 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 195
Match NameE-valueIdentityDescription
KIF4_XENLA1.404e-2841.24Chromosome-associated kinesin KIF4 OS=Xenopus laev... [more]
KIF4A_HUMAN1.404e-2841.36Chromosome-associated kinesin KIF4A OS=Homo sapien... [more]
KIF19_MOUSE1.404e-2835.38Kinesin-like protein KIF19 OS=Mus musculus GN=Kif1... [more]
BIMC_EMENI1.834e-2839.15Kinesin-like protein bimC OS=Emericella nidulans G... [more]
KI18B_CHICK3.129e-2838.57Kinesin-like protein KIF18B OS=Gallus gallus GN=KI... [more]
CUT7_SCHPO4.086e-2835.65Kinesin-like protein cut7 OS=Schizosaccharomyces p... [more]
KL61_DROME5.337e-2840.40Bipolar kinesin KRP-130 OS=Drosophila melanogaster... [more]
KIF4_MOUSE6.970e-2840.31Chromosome-associated kinesin KIF4 OS=Mus musculus... [more]
KIF4B_HUMAN6.970e-2840.84Chromosome-associated kinesin KIF4B OS=Homo sapien... [more]
KI18A_MOUSE6.970e-2837.45Kinesin-like protein KIF18A OS=Mus musculus GN=Kif... [more]

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Properties
Property NameValue
Genbank descriptionC32004F03EF DevOvary1 Citrus clementina cDNA clone C32004F03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876424 ID=FC876424; Name=FC876424; organism=Citrus clementina; type=EST; length=673bp
CTCCTAAGAAGTTGGAGATAAAGCAAGCAGCAGAAGGTGGTACCCAAGAA
GTGCCAGGACTCACTGAAGCTCAAGTATATGGTACAGAGGAAGTGTGGGA
GCTACTTAAGTCTGGAGCCAGAGTTAGATCTGTTGGATCCACCAATGCCA
ATGAGCTCAGTAGCCGGTCTCACTGCTTGTTGCGAGTAACTGTGAAGGGG
GAGAATCTGATAAATGGGCAGAAGACTAAGAGTCACCTCTGGCTGGTAGA
CTTGGCAGGCAGTGAACGTGTGGGGAAGATTGAAGTTGATGGTGAGAGGT
TGAAGGAATCTCAGTTTATAAATAAATCTCTCTCTGCACTTGGTGATGTT
ATATCTGCTCTGGCATCTAAATCAGGCCACATTCCGTACAGGAACTCGAA
GCTCACTCATATTTTGCAGAGCTCTCTAGGTGGAGATTGCAAGACTCTGA
TGTTTGTCCAGATCAGCCCAAGTTCTTCAGACCTTGGAGAGACCCCTTGT
TCACTGAATTTTGCCAGCCGAGTTCGGGGAATTGAAAGTGGTCCTGCTCG
GAAACAATCAGACATTTCTGAACTTTTTAAGTACAAGCAAATGGCAGAAA
AGTTAAAGCAGGATGAGAAGGAGACGAAGAAGTTGCAGGACAATTTGCAG
TCTGTACAATTAAGGCTCGCTGC
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