FC876424

Overview
NameFC876424
Unique NameFC876424
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length673
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876424 vs. ExPASy Swiss-Prot
Match: ARK2_ARATH (Armadillo repeat-containing kinesin-like protein 2 OS=Arabidopsis thaliana GN=ARK2 PE=1 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 6.970e-28
Identity = 84/233 (36.05%), Postives = 122/233 (52.36%), Query Frame = 3
Query:   39 GTQEVPGLTEAQVYGTEEVWELLKSGARVRSVGSTNANELSSRSHCLLRVTVKG---EN---LINGQKTKSH-------------LWLVDLAGSERVGKIEVDGERLKESQFINKSLSALGDVISALASKSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETPCSLNFASRVRGIESGPARKQSDISELFKYKQMAEKLK--------QDEKETKKLQDNLQSV 656
            G   +PG T  ++   +   ELL+ G   R   +T  N  SSRSH +L V VK    EN   + N  ++ SH             L LVDLAGSERV K   +G  L+E++ IN SLSALG  I+A+A  S H+P R+SKLT +L+ S GG  +T + V I PS    GET  ++ F  R   +E+        I E F YK +++KL+        ++E++ K   D+++ +
Sbjct:  219 GDVSLPGATHVEIRNQQNFLELLQLGETHRVAANTKLNTESSRSHAILMVHVKRSVVENEFPVSNEMESSSHFVRPSKPLVRRSKLVLVDLAGSERVHKSGSEGHMLEEAKSINLSLSALGKCINAIAENSPHVPLRDSKLTRLLRDSFGGTARTSLIVTIGPSPRHRGETTSTILFGQRAMKVEN-----MLKIKEEFDYKSLSKKLEVQLDKVIAENERQLKAFDDDVERI 446          
BLAST of FC876424 vs. ExPASy Swiss-Prot
Match: KI18B_MOUSE (Kinesin-like protein KIF18B OS=Mus musculus GN=Kif18b PE=2 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 9.104e-28
Identity = 80/206 (38.83%), Postives = 117/206 (56.80%), Query Frame = 3
Query:   51 VPGLTEAQVYGTEEVWELLKSGARVRSVGSTNANELSSRSHCLLRVTVKGENLINGQKTK---SHLWLVDLAGSERVGKIEVDGERLKESQFINKSLSALGDVISALASKSG---HIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETPCSLNFASRVRGIESGPARKQSDISELFKYKQMAEKLKQDEKETKKLQDNLQ 650
            VPGL+  Q    E++ E+L  G   R+   T+AN  SSRSH + ++ VK ++ + G       + + L+DLAGSER       GERL+E   IN+SL AL +V++ALA   G   H+PYR+SKLT +L+ S+GG+C+T+M   ISPSS    +T  +L +A R + I      K + IS      Q A   +Q + E   L++ LQ
Sbjct:  187 VPGLSFHQPASAEQLLEMLTRGNCSRTQHPTDANATSSRSHAIFQIFVKQQDRVPGLTQALRVAKMSLIDLAGSERASSTHAKGERLREGANINRSLLALINVLNALADAKGRKSHVPYRDSKLTRLLKDSIGGNCRTVMIAAISPSSLTYEDTYNTLKYADRAKEIRL--TLKSNVISVDHHISQYATICQQLQAEVAFLREKLQ 390          
BLAST of FC876424 vs. ExPASy Swiss-Prot
Match: ARK3_ARATH (Armadillo repeat-containing kinesin-like protein 3 OS=Arabidopsis thaliana GN=ARK3 PE=1 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 9.104e-28
Identity = 81/242 (33.47%), Postives = 123/242 (50.83%), Query Frame = 3
Query:   12 LEIKQAAEGGTQEVPGLTEAQVYGTEEVWELLKSGARVRSVGSTNANELSSRSHCLLRVTVK----------GENLINGQKTKS---------HLWLVDLAGSERVGKIEVDGERLKESQFINKSLSALGDVISALASKSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETPCSLNFASRVRGIESGPARKQSDISELFKYKQMAEKL--------KQDEKETKKLQDNLQSV 656
            + I +  + G   +PG T  ++   +   ELL+ G   R   +T  N  SSRSH +L V V+           E+  N   TKS          L +VDLAGSER+ K   +G  L+E++ IN SLSALG  I+ALA  S H+P+R+SKLT +L+ S GG  +T + + I PS    GET  ++ F  R   +E+        I E F YK ++ +L        +++E++ K   D ++ +
Sbjct:  220 IAIVEDPKNGDVSLPGATLVEIRDQQSFLELLQLGEAHRFAANTKLNTESSRSHAILMVNVRRSMKTRDGLSSESNGNSHMTKSLKPPVVRKGKLVVVDLAGSERINKSGSEGHTLEEAKSINLSLSALGKCINALAENSSHVPFRDSKLTRLLRDSFGGTARTSLVITIGPSPRHRGETTSTIMFGQRAMKVEN-----MVKIKEEFDYKSLSRRLEVQLDNLIEENERQQKAFVDEIERI 456          
BLAST of FC876424 vs. ExPASy Swiss-Prot
Match: KI18B_RAT (Kinesin-like protein KIF18B OS=Rattus norvegicus GN=Kif18b PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.189e-27
Identity = 78/209 (37.32%), Postives = 119/209 (56.94%), Query Frame = 3
Query:   51 VPGLTEAQVYGTEEVWELLKSGARVRSVGSTNANELSSRSHCLLRVTVKGENLINGQKTK---SHLWLVDLAGSERVGKIEVDGERLKESQFINKSLSALGDVISALASKSG---HIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETPCSLNFASRVRGIESGPARKQSDISELFKYKQMAEKLKQDEKETKKLQDNLQSVQ 659
            VPGL+  Q    +++ E+L  G   R+   T+AN  SSRSH + ++ VK ++ + G       + + L+DLAGSER       GERL+E   IN+SL AL +V++ALA   G   H+PYR+SKLT +L+ S+GG+C+T+M   +SPSS    +T  +L +A R + I      K + IS      Q A   +Q + E   L++ LQ+ +
Sbjct:  187 VPGLSFHQPASAQQLLEMLTRGNCSRTQHPTDANATSSRSHAIFQIFVKQQDRVPGLTQALRVAKMSLIDLAGSERASSTHAKGERLREGANINRSLLALINVLNALADAKGRKSHVPYRDSKLTRLLKDSIGGNCRTVMIAAVSPSSLTYEDTYNTLKYADRAKEIRL--TLKSNVISLDHHISQYATICQQLQAEVAALREKLQTYE 393          
BLAST of FC876424 vs. ExPASy Swiss-Prot
Match: KI13A_HUMAN (Kinesin-like protein KIF13A OS=Homo sapiens GN=KIF13A PE=1 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 1.553e-27
Identity = 85/226 (37.61%), Postives = 123/226 (54.42%), Query Frame = 3
Query:   51 VPGLTEAQVYGTEEVWELLKSGARVRSVGSTNANELSSRSHCLLRVTVKG-----ENLINGQKTKSHLWLVDLAGSERVGKIEVDGERLKESQFINKSLSALGDVISALA------SKSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETPCSLNFASRVRGI--------------------ESGPARKQSDISELFKYKQMAEKLKQDEKETKKL 635
            V GL++  V   E++  L+  G + R+V +TN NE SSRSH +  + +       ++  +G+K  S + LVDLAGSERV K    GERLKE   INKSL+ LG VIS+LA       KS  +PYR+S LT +L+ +LGG+ +T M   ISP++ +  ET  +L +A R + I                    E    R+Q   +E  K  ++ EKL++ EK  K+L
Sbjct:  182 VDGLSQLAVTSFEDIESLMSEGNKSRTVAATNMNEESSRSHAVFNIIITQTLYDLQSGNSGEKV-SKVSLVDLAGSERVSKTGAAGERLKEGSNINKSLTTLGLVISSLADQAAGKGKSKFVPYRDSVLTWLLKDNLGGNSQTSMIATISPAADNYEETLSTLRYADRAKRIVNHAVVNEDPNAKVIRELREEVEKLREQLSQAEAMKAPELKEKLEESEKLIKEL 406          
BLAST of FC876424 vs. ExPASy Swiss-Prot
Match: KIF3C_PONAB (Kinesin-like protein KIF3C OS=Pongo abelii GN=KIF3C PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.649e-27
Identity = 83/208 (39.90%), Postives = 118/208 (56.73%), Query Frame = 3
Query:    6 KKLEIKQAAEGGTQEVPGLTEAQVYGTEEVWELLKSGARVRSVGSTNANELSSRSHCLLRVTVK-GENLINGQK--TKSHLWLVDLAGSERVGKIEVD------------------------GERLKESQFINKSLSALGDVISALA-SKSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETPCSLNFASRVRGIESGP 545
            K+LE+K+  E G   +  L+       +E+  ++  G + R+VGST+ NE+SSRSH +  +TV+  E   +GQ       L LVDLAGSER  K   +                        GER KE+  IN SLSALG+VI+ALA ++S HIPYR+SKLT +LQ SLGG+ KT+M   + P+S    E+  +L FA+R + I++ P
Sbjct:  163 KRLELKENPETGVY-IKDLSSFVTKNVKEIEHVMNLGNQTRAVGSTHMNEVSSRSHAIFIITVECSERGSDGQDHIRVGKLNLVDLAGSERQNKAGPNTAGGASTPSSGGSGGGGGSGGGAGGERPKEASKINLSLSALGNVIAALAGNRSTHIPYRDSKLTRLLQDSLGGNAKTIMVATLGPASHSYDESLSTLRFANRAKNIKNKP 369          
BLAST of FC876424 vs. ExPASy Swiss-Prot
Match: KIF3C_HUMAN (Kinesin-like protein KIF3C OS=Homo sapiens GN=KIF3C PE=1 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 2.649e-27
Identity = 83/208 (39.90%), Postives = 118/208 (56.73%), Query Frame = 3
Query:    6 KKLEIKQAAEGGTQEVPGLTEAQVYGTEEVWELLKSGARVRSVGSTNANELSSRSHCLLRVTVK-GENLINGQK--TKSHLWLVDLAGSERVGKIEVD------------------------GERLKESQFINKSLSALGDVISALA-SKSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETPCSLNFASRVRGIESGP 545
            K+LE+K+  E G   +  L+       +E+  ++  G + R+VGST+ NE+SSRSH +  +TV+  E   +GQ       L LVDLAGSER  K   +                        GER KE+  IN SLSALG+VI+ALA ++S HIPYR+SKLT +LQ SLGG+ KT+M   + P+S    E+  +L FA+R + I++ P
Sbjct:  163 KRLELKENPETGVY-IKDLSSFVTKNVKEIEHVMNLGNQTRAVGSTHMNEVSSRSHAIFIITVECSERGSDGQDHIRVGKLNLVDLAGSERQNKAGPNTAGGAATPSSGGGGGGGGSGGGAGGERPKEASKINLSLSALGNVIAALAGNRSTHIPYRDSKLTRLLQDSLGGNAKTIMVATLGPASHSYDESLSTLRFANRAKNIKNKP 369          
BLAST of FC876424 vs. ExPASy Swiss-Prot
Match: KLP3_SCHPO (Kinesin-like protein 3 OS=Schizosaccharomyces pombe GN=klp3 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.459e-27
Identity = 70/164 (42.68%), Postives = 100/164 (60.98%), Query Frame = 3
Query:   51 VPGLTEAQVYGTEEVWELLKSGARVRSVGSTNANELSSRSHCLLRVTVKGENLINGQKTKSHLWLVDLAGSERVGKIEVDGERLKESQFINKSLSALGDVISALA-SKSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETPCSLNFASRVRGIES 539
            V GL    V    E  ++L  G   R+V ST+ N  SSRSH +  + V   +  +G+  +  L+LVDLAGSE VGK    G+ L+E++ IN+SLS LG VI++L  SK  H+PYR+SKLT IL+ SLGG+ +T + +  SP S +  ET  +L F  R + I++
Sbjct:  164 VQGLKTIYVSSETEALDILNKGMGSRAVASTSMNAQSSRSHSIFVLEVVQTDTESGETRRGRLFLVDLAGSESVGKSGAVGQTLEEAKKINRSLSTLGMVINSLTDSKLSHVPYRDSKLTRILKESLGGNSRTTLIINCSPDSYNATETLSTLRFGHRAKSIKN 327          
BLAST of FC876424 vs. ExPASy Swiss-Prot
Match: KIF3C_BOVIN (Kinesin-like protein KIF3C OS=Bos taurus GN=KIF3C PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.459e-27
Identity = 82/206 (39.81%), Postives = 118/206 (57.28%), Query Frame = 3
Query:    6 KKLEIKQAAEGGTQEVPGLTEAQVYGTEEVWELLKSGARVRSVGSTNANELSSRSHCLLRVTVK-GENLINGQK--TKSHLWLVDLAGSERVGKIEVD----------------------GERLKESQFINKSLSALGDVISALA-SKSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETPCSLNFASRVRGIESGP 545
            K+LE+K+  E G   +  L+       +E+  ++  G + R+VGST+ NE+SSRSH +  +TV+  E   +GQ       L LVDLAGSER  K   +                      GER KE+  IN SLSALG+VI+AL+ ++S HIPYR+SKLT +LQ SLGG+ KT+M   + P+S    E+  +L FA+R + I++ P
Sbjct:  163 KRLELKENPETGVY-IKDLSSFVTKNVKEIEHVMNLGNQTRAVGSTHMNEVSSRSHAIFVITVECSERGSDGQDHIRVGKLNLVDLAGSERQNKAGPNTTGGTATQPTGGGGGGGGGGGGGERPKEASKINLSLSALGNVIAALSGNRSTHIPYRDSKLTRLLQDSLGGNAKTIMVATLGPASHSYDESLSTLRFANRAKNIKNKP 367          
BLAST of FC876424 vs. ExPASy Swiss-Prot
Match: KI18B_HUMAN (Kinesin-like protein KIF18B OS=Homo sapiens GN=KIF18B PE=1 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 3.459e-27
Identity = 80/207 (38.65%), Postives = 118/207 (57.00%), Query Frame = 3
Query:   51 VPGLTEAQVYGTEEVWELLKSGARVRSVGSTNANELSSRSHCLLRVTVKGENLINGQKTK---SHLWLVDLAGSERVGKIEVDGERLKESQFINKSLSALGDVISALASKSG---HIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETPCSLNFASRVRGIESGPARKQSDISEL-FKYKQMAEKLKQDEKETKKLQDNLQ 650
            V GL+  Q    E++ E+L  G R R+   T+AN  SSRSH + ++ VK ++ + G       + + L+DLAGSER       GERL+E   IN+SL AL +V++ALA   G   H+PYR+SKLT +L+ SLGG+C+T+M   ISPSS    +T  +L +A R + I       +S+++ L     Q A   +Q + E   L+  LQ
Sbjct:  185 VQGLSFHQPASAEQLLEILTRGNRNRTQHPTDANATSSRSHAIFQIFVKQQDRVPGLTQAVQVAKMSLIDLAGSERASSTHAKGERLREGANINRSLLALINVLNALADAKGRKTHVPYRDSKLTRLLKDSLGGNCRTVMIAAISPSSLTYEDTYNTLKYADRAKEIR---LSLKSNVTSLDCHISQYATICQQLQAEVAALRKKLQ 388          
The following BLAST results are available for this feature:
BLAST of FC876424 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 195
Match NameE-valueIdentityDescription
ARK2_ARATH6.970e-2836.05Armadillo repeat-containing kinesin-like protein 2... [more]
KI18B_MOUSE9.104e-2838.83Kinesin-like protein KIF18B OS=Mus musculus GN=Kif... [more]
ARK3_ARATH9.104e-2833.47Armadillo repeat-containing kinesin-like protein 3... [more]
KI18B_RAT1.189e-2737.32Kinesin-like protein KIF18B OS=Rattus norvegicus G... [more]
KI13A_HUMAN1.553e-2737.61Kinesin-like protein KIF13A OS=Homo sapiens GN=KIF... [more]
KIF3C_PONAB2.649e-2739.90Kinesin-like protein KIF3C OS=Pongo abelii GN=KIF3... [more]
KIF3C_HUMAN2.649e-2739.90Kinesin-like protein KIF3C OS=Homo sapiens GN=KIF3... [more]
KLP3_SCHPO3.459e-2742.68Kinesin-like protein 3 OS=Schizosaccharomyces pomb... [more]
KIF3C_BOVIN3.459e-2739.81Kinesin-like protein KIF3C OS=Bos taurus GN=KIF3C ... [more]
KI18B_HUMAN3.459e-2738.65Kinesin-like protein KIF18B OS=Homo sapiens GN=KIF... [more]

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Properties
Property NameValue
Genbank descriptionC32004F03EF DevOvary1 Citrus clementina cDNA clone C32004F03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876424 ID=FC876424; Name=FC876424; organism=Citrus clementina; type=EST; length=673bp
CTCCTAAGAAGTTGGAGATAAAGCAAGCAGCAGAAGGTGGTACCCAAGAA
GTGCCAGGACTCACTGAAGCTCAAGTATATGGTACAGAGGAAGTGTGGGA
GCTACTTAAGTCTGGAGCCAGAGTTAGATCTGTTGGATCCACCAATGCCA
ATGAGCTCAGTAGCCGGTCTCACTGCTTGTTGCGAGTAACTGTGAAGGGG
GAGAATCTGATAAATGGGCAGAAGACTAAGAGTCACCTCTGGCTGGTAGA
CTTGGCAGGCAGTGAACGTGTGGGGAAGATTGAAGTTGATGGTGAGAGGT
TGAAGGAATCTCAGTTTATAAATAAATCTCTCTCTGCACTTGGTGATGTT
ATATCTGCTCTGGCATCTAAATCAGGCCACATTCCGTACAGGAACTCGAA
GCTCACTCATATTTTGCAGAGCTCTCTAGGTGGAGATTGCAAGACTCTGA
TGTTTGTCCAGATCAGCCCAAGTTCTTCAGACCTTGGAGAGACCCCTTGT
TCACTGAATTTTGCCAGCCGAGTTCGGGGAATTGAAAGTGGTCCTGCTCG
GAAACAATCAGACATTTCTGAACTTTTTAAGTACAAGCAAATGGCAGAAA
AGTTAAAGCAGGATGAGAAGGAGACGAAGAAGTTGCAGGACAATTTGCAG
TCTGTACAATTAAGGCTCGCTGC
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