FC876424

Overview
NameFC876424
Unique NameFC876424
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length673
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876424 vs. ExPASy Swiss-Prot
Match: CIN8_CANGA (Kinesin-like protein CIN8 OS=Candida glabrata GN=CIN8 PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.459e-27
Identity = 76/196 (38.78%), Postives = 111/196 (56.63%), Query Frame = 3
Query:   51 VPGLTEAQVYGTEEVWELLKSGARVRSVGSTNANELSSRSHCLLRVTVKGENLINGQKTK-SHLWLVDLAGSERVGKIEVDGERLKESQFINKSLSALGDVISALASKSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETPCSLNFASRVRGIESGPARKQSDISELFKYKQMAE--KLKQDEKETK 629
            +  L E  +    E  +LL+ G + R V ST  N+ SSRSH +  +T+  E   NG+  + S + LVDLAGSE + +     +R KE+  IN+SL  LG VI++LA KS HIP+R SKLT +LQ SLGG+ KT +   ISP+     ET  +L +AS+ + I++ P      + ++      +E  K+K D   TK
Sbjct:  311 IQNLEEFHITSAMEGLQLLQKGLKQRQVASTKMNDFSSRSHSIFTITLYKEQ--NGELFRVSKMNLVDLAGSENISRSGAMNQRAKEAGSINQSLLTLGRVINSLADKSEHIPFRESKLTRLLQDSLGGNTKTALIATISPAKMTSEETCSTLEYASKAKNIKNKPQLGAFIMKDILVRSITSELAKIKSDLLSTK 504          
BLAST of FC876424 vs. ExPASy Swiss-Prot
Match: KLP6_SCHPO (Kinesin-like protein 6 OS=Schizosaccharomyces pombe GN=klp6 PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.518e-27
Identity = 81/216 (37.50%), Postives = 120/216 (55.56%), Query Frame = 3
Query:    3 PKKLEIKQAAEGGTQEVPGLTEAQVYGTEEVWELLKSGARVRSVGSTNANELSSRSHCLLRVTV-----KGENLI-----NGQKTKSHLWLVDLAGSERVGKIEVDGERLKESQFINKSLSALGDVISALAS--KSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETPCSLNFASRVRGIESGPARKQSDIS-ELFKYKQMAEKLKQ 611
            PK L I + AE     VPGL+       EEV E++  G   R++  T AN +SSRSH +L++ +      GE        N  K +S    +DLAGSER    +  G+RL E   IN+SL ALG+ I++L    +  H+PYR+SKLT +L+ SLGG+C+T M V ISPSS    ET  +L + +R + I++  +R    +   + +Y +   +L+Q
Sbjct:  202 PKSLNICEDAEQNVS-VPGLSYFTPTNLEEVMEIIIRGNSNRTMSPTEANAVSSRSHAVLQIYITQTPKSGEKQEESESQNSHKVRSVFSFIDLAGSERASATKNRGKRLVEGANINRSLLALGNCINSLCEPRRRQHVPYRDSKLTRLLKFSLGGNCRTCMIVCISPSSEHYDETHNTLKYGNRAKNIKTKVSRNVVSVDRHVSEYVRTIYELRQ 416          
BLAST of FC876424 vs. ExPASy Swiss-Prot
Match: KIF3C_RAT (Kinesin-like protein KIF3C OS=Rattus norvegicus GN=Kif3c PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.518e-27
Identity = 83/210 (39.52%), Postives = 118/210 (56.19%), Query Frame = 3
Query:    6 KKLEIKQAAEGGTQEVPGLTEAQVYGTEEVWELLKSGARVRSVGSTNANELSSRSHCLLRVTVK-GENLINGQK--TKSHLWLVDLAGSERVGKIEVD--------------------------GERLKESQFINKSLSALGDVISALA-SKSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETPCSLNFASRVRGIESGP 545
            K+LE+K+  E G   +  L+       +E+  ++  G + R+VGST+ NE+SSRSH +  +TV+  E   +GQ       L LVDLAGSER  K   +                          GER KE+  IN SLSALG+VI+ALA ++S HIPYR+SKLT +LQ SLGG+ KT+M   + P+S    E+  +L FA+R + I++ P
Sbjct:  163 KRLELKENPETGVY-IKDLSSFVTKNVKEIEHVMNLGNQARAVGSTHMNEVSSRSHAIFVITVECSERGSDGQDHIRVGKLNLVDLAGSERQNKAGPNTPGGPATQSTAGGGGGGGGTSGSGSSGERPKEASKINLSLSALGNVIAALAGNRSTHIPYRDSKLTRLLQDSLGGNAKTIMVATLGPASHSYDESLSTLRFANRAKNIKNKP 371          
BLAST of FC876424 vs. ExPASy Swiss-Prot
Match: KIF3C_MOUSE (Kinesin-like protein KIF3C OS=Mus musculus GN=Kif3c PE=2 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 4.518e-27
Identity = 83/210 (39.52%), Postives = 118/210 (56.19%), Query Frame = 3
Query:    6 KKLEIKQAAEGGTQEVPGLTEAQVYGTEEVWELLKSGARVRSVGSTNANELSSRSHCLLRVTVK-GENLINGQK--TKSHLWLVDLAGSERVGKIEVD--------------------------GERLKESQFINKSLSALGDVISALA-SKSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETPCSLNFASRVRGIESGP 545
            K+LE+K+  E G   +  L+       +E+  ++  G + R+VGST+ NE+SSRSH +  +TV+  E   +GQ       L LVDLAGSER  K   +                          GER KE+  IN SLSALG+VI+ALA ++S HIPYR+SKLT +LQ SLGG+ KT+M   + P+S    E+  +L FA+R + I++ P
Sbjct:  163 KRLELKENPETGVY-IKDLSSFVTKNVKEIEHVMNLGNQARAVGSTHMNEVSSRSHAIFVITVECSERGSDGQDHIRVGKLNLVDLAGSERQNKAGPNAAGGPATQPTAGGGSGSGSASGSASSGERPKEASKINLSLSALGNVIAALAGNRSTHIPYRDSKLTRLLQDSLGGNAKTIMVATLGPASHSYDESLSTLRFANRAKNIKNKP 371          
BLAST of FC876424 vs. ExPASy Swiss-Prot
Match: KI13A_MOUSE (Kinesin-like protein KIF13A OS=Mus musculus GN=Kif13a PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.518e-27
Identity = 84/226 (37.17%), Postives = 123/226 (54.42%), Query Frame = 3
Query:   51 VPGLTEAQVYGTEEVWELLKSGARVRSVGSTNANELSSRSHCLLRVTVKG-----ENLINGQKTKSHLWLVDLAGSERVGKIEVDGERLKESQFINKSLSALGDVISALA------SKSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETPCSLNFASRVRGI--------------------ESGPARKQSDISELFKYKQMAEKLKQDEKETKKL 635
            V GL++  V   E++  L+  G + R+V +TN NE SSRSH +  + +       ++  +G+K  S + LVDLAGSERV K    GERLKE   INKSL+ LG VIS+LA       K+  +PYR+S LT +L+ +LGG+ +T M   ISP++ +  ET  +L +A R + I                    E    R+Q   +E  K  ++ EKL++ EK  K+L
Sbjct:  182 VDGLSQLAVTSFEDIESLMSEGNKSRTVAATNMNEESSRSHAVFNIIITQTLYDLQSGNSGEKV-SKVSLVDLAGSERVSKTGAAGERLKEGSNINKSLTTLGLVISSLADQAAGKGKNKFVPYRDSVLTWLLKDNLGGNSQTSMIATISPAADNYEETLSTLRYADRAKRIVNHAVVNEDPNAKVIRELREEVEKLREQLSKAEAMKPPELKEKLEESEKLIKEL 406          
BLAST of FC876424 vs. ExPASy Swiss-Prot
Match: ARK1_ORYSJ (Armadillo repeat-containing kinesin-like protein 1 OS=Oryza sativa subsp. japonica GN=Os03g0152900 PE=2 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 5.901e-27
Identity = 87/253 (34.39%), Postives = 128/253 (50.59%), Query Frame = 3
Query:    3 PKKLEIKQAAEGGTQEV--PGLTEAQVYGTEEVWELLKSGARVRSVGSTNANELSSRSHCLLRVTVKGENLI-NGQKT------------------KSHLWLVDLAGSERVGKIEVDGERLKESQFINKSLSALGDVISALASKSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETPCSLNFASRVRGI------------ESGPARKQSDISELFKYKQMAEKLKQDEKE--TKKLQDNLQSV 656
            P+K  I    +  T EV  PG  + ++   E V++LL+ G   R   +T  N  SSRSH +L + ++  + I +G  T                  KS L +VDLAGSER+ K   +G  ++E++FIN SL++LG  I+ALA  S HIP R+SKLT IL+ S GG  +T + V I PSS    ET  ++ F  R   I            ES   + + ++  L    +  +KLK  EK    KKL+++  S+
Sbjct:  202 PEKTNIPIVEDPKTGEVSLPGAAKVEIRDLEHVFQLLQIGEMNRHAANTKMNTESSRSHAILIIHIQRSSRIEDGSNTSLPNGTDNLFPDNLPLVLKSKLLIVDLAGSERIDKSGSEGHMIEEAKFINLSLTSLGKCINALAENSPHIPTRDSKLTRILRDSFGGTARTSLIVTIGPSSRHFSETSSTIMFGQRAMKIVNTIRIKEEVDYESLYKKVEHEVDHLTSEMERQQKLKNSEKMQLEKKLKESEASL 454          
BLAST of FC876424 vs. ExPASy Swiss-Prot
Match: KI15B_XENLA (Kinesin-like protein KIF15-B OS=Xenopus laevis GN=kif15-B PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.007e-26
Identity = 80/197 (40.61%), Postives = 110/197 (55.84%), Query Frame = 3
Query:   51 VPGLTEAQVYGTEEVWELLKSGARVRSVGSTNANELSSRSHCLLRVTVKGENLING--QKTKSHLWLVDLAGSERVGKIEVDGERLKESQFINKSLSALGDVISALAS----KSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETPCSLNFASRVRGIESGPA---RKQSDISEL-FKYKQMAEKLKQ 611
            V G  E  V    E +++L  G R R V ST+ N  SSRSH +  VT++     N       S L LVDLAGSER    + +G RLKE+  IN+SLS LG VI+AL      +  HI YR+SKLT +L+ SLGG+ KT +   + P S   GET  +L FA R + I++        Q ++S+L  + K++ E+L Q
Sbjct:  198 VVGAVEQVVTSAAEAYQVLSMGWRNRRVASTSMNRESSRSHAVFTVTIESMEKTNDIVNIRSSQLNLVDLAGSERQKDTQTEGVRLKEAGSINRSLSCLGQVITALVDVANGRQRHICYRDSKLTFLLRDSLGGNAKTFIIANVHPGSKCFGETLSTLQFAQRAKLIKNKAVVNEDTQGNVSQLQAEVKKLKEQLSQ 394          
BLAST of FC876424 vs. ExPASy Swiss-Prot
Match: KI15A_XENLA (Kinesin-like protein KIF15-A OS=Xenopus laevis GN=kif15-A PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.007e-26
Identity = 82/199 (41.21%), Postives = 113/199 (56.78%), Query Frame = 3
Query:   51 VPGLTEAQVYGTEEVWELLKSGARVRSVGSTNANELSSRSHCLLRVTV----KGENLINGQKTKSHLWLVDLAGSERVGKIEVDGERLKESQFINKSLSALGDVISALAS----KSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETPCSLNFASRVRGIESGPA---RKQSDISEL-FKYKQMAEKLKQ 611
            V G  E  V    E +++L  G R R V ST+ N  SSRSH +  VT+    K  +L+N +   S L LVDLAGSER    + +G RLKE+  IN+SLS LG VI+AL      +  HI YR+SKLT +L+ SLGG+ KT     + P S   GET  +L FA R + I++        Q ++S+L  + K++ E+L Q
Sbjct:  198 VVGAVEQVVTSAAEAYQVLSMGWRNRRVASTSMNRESSRSHAVFTVTIESMEKTNDLVNIRS--SQLNLVDLAGSERQKDTQTEGVRLKEAGSINRSLSCLGQVITALVDVANGRQRHICYRDSKLTFLLRDSLGGNAKTFYIANVHPGSKCFGETLSTLQFAQRAKLIKNKAVVNEDTQGNVSQLQAEVKKLKEQLSQ 394          
BLAST of FC876424 vs. ExPASy Swiss-Prot
Match: KIF15_MOUSE (Kinesin-like protein KIF15 OS=Mus musculus GN=Kif15 PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.315e-26
Identity = 82/199 (41.21%), Postives = 113/199 (56.78%), Query Frame = 3
Query:   51 VPGLTEAQVYGTEEVWELLKSGARVRSVGSTNANELSSRSHCLLRVTVKGENLINGQKT----KSHLWLVDLAGSERVGKIEVDGERLKESQFINKSLSALGDVISALAS----KSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETPCSLNFASRVRGIESGPA---RKQSDISEL-FKYKQMAEKLKQ 611
            V G  E  V    E +++L  G R R V ST+ N  SSRSH +  +T+  E++    +T     S L LVDLAGSER      +G RLKE+  IN+SLS LG VI+AL      K  HI YR+SKLT +L+ SLGG+ KT +   + P S   GET  +LNFA R + I++        Q ++S+L  + K++ E+L Q
Sbjct:  197 VVGAVEQAVTSAAETYQVLSRGWRNRRVASTSMNRESSRSHAVFTITI--ESMEKSSETVNIRTSLLNLVDLAGSERQKDTHAEGMRLKEAGNINRSLSCLGQVITALVDVGNGKQRHICYRDSKLTFLLRDSLGGNAKTAIIANVHPGSRCFGETLSTLNFAQRAKLIKNKAVVNEDTQGNVSQLQAEVKRLKEQLSQ 393          
BLAST of FC876424 vs. ExPASy Swiss-Prot
Match: KI18A_HUMAN (Kinesin-like protein KIF18A OS=Homo sapiens GN=KIF18A PE=1 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 1.315e-26
Identity = 72/169 (42.60%), Postives = 104/169 (61.54%), Query Frame = 3
Query:   51 VPGLTEAQVYGTEEVWELLKSGARVRSVGSTNANELSSRSHCLLRVTVKGENL---INGQKTKSHLWLVDLAGSERVGKIEVDGERLKESQFINKSLSALGDVISALAS---KSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETPCSLNFASRVRGIES 539
            V GLT  Q   +EE+  LL +G + R+   T+ N  SSRSH + ++ ++ ++    IN     + + L+DLAGSER       G R  E   IN+SL ALG+VI+ALA    K+ HIPYRNSKLT +L+ SLGG+C+T+M   +SPSS    +T  +L +A+R + I+S
Sbjct:  189 VHGLTLHQPKSSEEILHLLDNGNKNRTQHPTDMNATSSRSHAVFQIYLRQQDKTASINQNVRIAKMSLIDLAGSERASTSGAKGTRFVEGTNINRSLLALGNVINALADSKRKNQHIPYRNSKLTRLLKDSLGGNCQTIMIAAVSPSSVFYDDTYNTLKYANRAKDIKS 357          
The following BLAST results are available for this feature:
BLAST of FC876424 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 195
Match NameE-valueIdentityDescription
CIN8_CANGA3.459e-2738.78Kinesin-like protein CIN8 OS=Candida glabrata GN=C... [more]
KLP6_SCHPO4.518e-2737.50Kinesin-like protein 6 OS=Schizosaccharomyces pomb... [more]
KIF3C_RAT4.518e-2739.52Kinesin-like protein KIF3C OS=Rattus norvegicus GN... [more]
KIF3C_MOUSE4.518e-2739.52Kinesin-like protein KIF3C OS=Mus musculus GN=Kif3... [more]
KI13A_MOUSE4.518e-2737.17Kinesin-like protein KIF13A OS=Mus musculus GN=Kif... [more]
ARK1_ORYSJ5.901e-2734.39Armadillo repeat-containing kinesin-like protein 1... [more]
KI15B_XENLA1.007e-2640.61Kinesin-like protein KIF15-B OS=Xenopus laevis GN=... [more]
KI15A_XENLA1.007e-2641.21Kinesin-like protein KIF15-A OS=Xenopus laevis GN=... [more]
KIF15_MOUSE1.315e-2641.21Kinesin-like protein KIF15 OS=Mus musculus GN=Kif1... [more]
KI18A_HUMAN1.315e-2642.60Kinesin-like protein KIF18A OS=Homo sapiens GN=KIF... [more]

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Properties
Property NameValue
Genbank descriptionC32004F03EF DevOvary1 Citrus clementina cDNA clone C32004F03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876424 ID=FC876424; Name=FC876424; organism=Citrus clementina; type=EST; length=673bp
CTCCTAAGAAGTTGGAGATAAAGCAAGCAGCAGAAGGTGGTACCCAAGAA
GTGCCAGGACTCACTGAAGCTCAAGTATATGGTACAGAGGAAGTGTGGGA
GCTACTTAAGTCTGGAGCCAGAGTTAGATCTGTTGGATCCACCAATGCCA
ATGAGCTCAGTAGCCGGTCTCACTGCTTGTTGCGAGTAACTGTGAAGGGG
GAGAATCTGATAAATGGGCAGAAGACTAAGAGTCACCTCTGGCTGGTAGA
CTTGGCAGGCAGTGAACGTGTGGGGAAGATTGAAGTTGATGGTGAGAGGT
TGAAGGAATCTCAGTTTATAAATAAATCTCTCTCTGCACTTGGTGATGTT
ATATCTGCTCTGGCATCTAAATCAGGCCACATTCCGTACAGGAACTCGAA
GCTCACTCATATTTTGCAGAGCTCTCTAGGTGGAGATTGCAAGACTCTGA
TGTTTGTCCAGATCAGCCCAAGTTCTTCAGACCTTGGAGAGACCCCTTGT
TCACTGAATTTTGCCAGCCGAGTTCGGGGAATTGAAAGTGGTCCTGCTCG
GAAACAATCAGACATTTCTGAACTTTTTAAGTACAAGCAAATGGCAGAAA
AGTTAAAGCAGGATGAGAAGGAGACGAAGAAGTTGCAGGACAATTTGCAG
TCTGTACAATTAAGGCTCGCTGC
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