FC876429
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: THIM_HUMAN (3-ketoacyl-CoA thiolase, mitochondrial OS=Homo sapiens GN=ACAA2 PE=1 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 5.782e-13 Identity = 57/204 (27.94%), Postives = 86/204 (42.16%), Query Frame = 2 Query: 2 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVG-QVNPKVEIFTQARDCL----------LPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTK 580 V +VAA RT A G KD A DL KA + +++P V +++G VL S R G P+ P T+NR C SG Q++ + I ++ + G ESM+ V + K+ + D L LPM +T+EN+A + ++R+E D G F DE+ P+ K Sbjct: 7 VFVVAAKRTPF-GAYGGLLKDFTATDLSEFAAKAALSAGKVSPETVDSVIMGNVLQSSSDAIYLARHVGLRVGIPKETPALTINRLCGSGFQSIVNGCQEICVKEAEVVLCGGTESMSQAPYCVRNVRFGTKLGSDIKLEDSLWVSLTDQHVQLPMAMTAENLAVKHKISREECDKYALQSQQRWKAANDAGYFNDEMAPIEVK 209
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: FADA_SHEB5 (3-ketoacyl-CoA thiolase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=fadA PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 5.782e-13 Identity = 53/187 (28.34%), Postives = 89/187 (47.59%), Query Frame = 2 Query: 5 VIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEI 562 VIV RT + ++K G F++ A+ L A ++K ++ + +L+P+ + D++ G V R A+ AG P+T TVNR C S + A+ A AI G+ D I G+E M + + V+ + + MG+T+E + + G+TR++QD G+F EI Sbjct: 5 VIVDCIRTPMGRSKAGVFRNVRAETLSAELMKGLLLRNPQLDPNLIEDVIWGCVQQTLEQGFNIARNASLLAGIPKTAGAVTVNRLCGSSMDAIHQAARAIMTGMGDTFIIGGVEHM--GHVPMSHGVDFHPGLANKVAKASGMMGLTAEMLGKLHGITREQQDAFAVRSHQRAYAATVEGRFAKEI 189
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: FADA_PHOLL (3-ketoacyl-CoA thiolase OS=Photorhabdus luminescens subsp. laumondii GN=fadA PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 5.782e-13 Identity = 55/191 (28.80%), Postives = 89/191 (46.60%), Query Frame = 2 Query: 2 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPV 571 VVI+ RT + ++K G F+ A+DL A ++K + ++ + E+ DI G V R AA A P +VP TVNR C S +QA+ D A I G ++ + G+E M ++ +PK+ + MG+T+E +A+ ++R+ QD G F +EI P+ Sbjct: 4 VVIIDGIRTPMGRSKGGAFRQVRAEDLSAHLMKKLFKRNPAIQQHEIDDIYWGCVQQTLEQGFNIARNAALLADIPHSVPAVTVNRLCGSSMQALHDGARMIMTGEANVTLIGGVEHMGHVPMTHGVDFHPKMSL--SVAKAAGVMGLTAEMLAKIHHISREMQDEFALRSHQRATQATQSGAFANEISPI 192
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: FADA_SHESW (3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain W3-18-1) GN=fadA PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 7.552e-13 Identity = 53/187 (28.34%), Postives = 88/187 (47.06%), Query Frame = 2 Query: 5 VIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEI 562 VIV RT + ++K G F++ A+ L A ++K ++ + +L+P+ + D++ G V R A+ AG P+T TVNR C S + A+ A AI G+ D I G+E M + + V+ + MG+T+E + + G+TR++QD G+F EI Sbjct: 5 VIVDCIRTPMGRSKAGVFRNVRAETLSAELMKGLLLRNPQLDPNLIEDVIWGCVQQTLEQGFNIARNASLLAGIPKTAGAVTVNRLCGSSMDAIHQAARAIMTGMGDTFIIGGVEHM--GHVPMSHGVDFHPGLANNVAKASGMMGLTAEMLGKLHGITREQQDAFAVRSHQRAYAATIEGRFAKEI 189
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: FADA_SHESR (3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain MR-7) GN=fadA PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 7.552e-13 Identity = 52/190 (27.37%), Postives = 90/190 (47.37%), Query Frame = 2 Query: 5 VIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPV 571 VIV RT + ++K G F++ A+ L A ++K ++ + +L+P+ + D++ G V R A+ AG P+T TVNR C S ++A+ A AI G+ D I G+E M + + V+ + MG+T+E + + G++R++QD G+F EI + Sbjct: 5 VIVDCIRTPMGRSKAGVFRNVRAETLSAELMKGLLLRNPQLDPNAIEDVIWGCVQQTLEQGFNIARNASLLAGIPKTAGAVTVNRLCGSSMEAIHQAARAIMTGMGDTFIIGGVEHM--GHVPMNHGVDFHPGLANNVAKASGMMGLTAEMLGKLHGISREQQDAFAVRSHQRAHAATVEGRFAKEIYAI 192
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: FADA_SHEPC (3-ketoacyl-CoA thiolase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=fadA PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 7.552e-13 Identity = 53/187 (28.34%), Postives = 88/187 (47.06%), Query Frame = 2 Query: 5 VIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEI 562 VIV RT + ++K G F++ A+ L A ++K ++ + +L+P+ + D++ G V R A+ AG P+T TVNR C S + A+ A AI G+ D I G+E M + + V+ + MG+T+E + + G+TR++QD G+F EI Sbjct: 5 VIVDCIRTPMGRSKAGVFRNVRAETLSAELMKGLLLRNPQLDPNLIEDVIWGCVQQTLEQGFNIARNASLLAGIPKTAGAVTVNRLCGSSMDAIHQAARAIMTGMGDTFIIGGVEHM--GHVPMSHGVDFHPGLANNVAKASGMMGLTAEMLGKLHGITREQQDAFAVRSHQRAYAATVEGRFAKEI 189
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: FADA_SHEB8 (3-ketoacyl-CoA thiolase OS=Shewanella baltica (strain OS185) GN=fadA PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 7.552e-13 Identity = 53/187 (28.34%), Postives = 88/187 (47.06%), Query Frame = 2 Query: 5 VIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEI 562 VIV RT + ++K G F++ A+ L A ++K ++ + +L+P+ + D++ G V R A+ AG P+T TVNR C S + A+ A AI G+ D I G+E M + + V+ + MG+T+E + + G+TR++QD G+F EI Sbjct: 5 VIVDCIRTPMGRSKAGVFRNVRAETLSAELMKGLLLRNPQLDPNLIEDVIWGCVQQTLEQGFNIARNASLLAGIPKTAGAVTVNRLCGSSMDAIHQAARAIMTGMGDTFIIGGVEHM--GHVPMSHGVDFHPGLANNVAKASGMMGLTAEMLGKLHGITREQQDAFAVRSHQRAYAATVEGRFAKEI 189
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: THIM_PONAB (3-ketoacyl-CoA thiolase, mitochondrial OS=Pongo abelii GN=ACAA2 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.288e-12 Identity = 55/204 (26.96%), Postives = 88/204 (43.14%), Query Frame = 2 Query: 2 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESM--------TVNSISVVG---QVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTK 580 V +VAA RT A G KD A DL KA + +++P V +++G VL S R G P+ P T+NR C SG Q++ + I ++ + G ESM TV + +G ++ + + + LP+ +T+EN+A + ++R+E D G F DE+ P+ K Sbjct: 7 VFVVAAKRTPF-GAYGGLLKDFTATDLSEFAAKAALSAGKVSPETVDSVIMGNVLQSSSDAIYLARHVGLRVGIPKETPALTINRLCGSGFQSIVNGCQEICVKEAEVVLCGGTESMSQAPYCVRTVRFGTKLGSDIKLEDSLWVSLTDQHVQLPIAMTAENLAVKHKISREECDKYALQSQQRWKAANDAGYFNDEMAPIEVK 209
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: VRAB_STAAR (Putative acetyl-CoA C-acetyltransferase vraB OS=Staphylococcus aureus (strain MRSA252) GN=vraB PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.682e-12 Identity = 61/202 (30.20%), Postives = 95/202 (47.03%), Query Frame = 2 Query: 5 VIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT--------VNSI--SVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTK 580 VIVAA RTA K G K + LL P+ + EK S++ D+V+G V+ G A R A AG +++P T++RQC SGL++V I+AG + IA G+ES + +S+ + + + + + D + G +ENVA+ +GV+R+ QD G EI+P+ K Sbjct: 5 VIVAAKRTAFGKYG-GTLKHLEPEQLLKPLFQHFKEKYPEVISKIDDVVLGNVVGNGGNIA---RKALLEAGLKDSIPGVTIDRQCGSGLESVQYACRMIQAGAGKVYIAGGVESTSRAPWKIKRPHSVYETALPEFYERASFAPEMSDPSMIQG--AENVAKMYGVSRELQDEFAYRSHQLTAENVKNGNISQEILPITVK 200
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: THIM_MOUSE (3-ketoacyl-CoA thiolase, mitochondrial OS=Mus musculus GN=Acaa2 PE=1 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 1.682e-12 Identity = 55/204 (26.96%), Postives = 87/204 (42.65%), Query Frame = 2 Query: 2 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVG-QVNPKVEIFTQARDCL----------LPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTK 580 V IVAA RT A G KD A DL +A + ++ P + ++VG V+ S A R G P T+NR C SG Q++ I + ++ + G ESM+ + V + K + + D L LPMG+T+EN+A ++ ++R++ D G F +E+ P+ K Sbjct: 7 VFIVAAKRTPF-GAYGGLLKDFSATDLTEFAARAALSAGKVPPETIDSVIVGNVMQSSSDAAYLARHVGLRVGVPTETGALTLNRLCGSGFQSIVSGCQEICSKDAEVVLCGGTESMSQSPYCVRNVRFGTKFGLDLKLEDTLWAGLTDQHVKLPMGMTAENLAAKYNISREDCDRYALQSQQRWKAANEAGYFNEEMAPIEVK 209 The following BLAST results are available for this feature:
BLAST of FC876429 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 176
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876429 ID=FC876429; Name=FC876429; organism=Citrus clementina; type=EST; length=639bpback to top |