FC876429
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: FADA_PSEFR (3-ketoacyl-CoA thiolase OS=Pseudomonas fragi GN=fadA PE=1 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 2.680e-18 Identity = 60/191 (31.41%), Postives = 99/191 (51.83%), Query Frame = 2 Query: 2 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEK-TRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPV 571 VVIV RT + ++K G ++T A+D+ A ++ V+E+ ++++P EV D++ G V RMA+ P T +TV+R C S + A+ A AI G D+ + G+E M +S++ V+P + A MG+T+E + + G++R++QD GKFKDEIIP+ Sbjct: 8 VVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHM--GHVSMMHGVDPNPHMSLYAAKASGMMGLTAEMLGKMHGISREQQDAFAVRSHQLAHKATVEGKFKDEIIPM 196
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: THIL_RHIME (Acetyl-CoA acetyltransferase OS=Rhizobium meliloti GN=phbA PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 4.571e-18 Identity = 69/203 (33.99%), Postives = 105/203 (51.72%), Query Frame = 2 Query: 2 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTV--NSISVVG--QVNPKVEIFTQARDCLLP------MGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTK 580 +VI +A RTA+ + G F +TLA +L A +KAV+E+ + EV ++++G VL P R AA AG P+ +N+ C SGL+AVA I G + +A G+ESM++ + + G ++ I T +D L MGIT+ENVA+++ +TR+EQD G+F DEI+P K Sbjct: 6 IVIASAARTAV-GSFNGAFGNTLAHELGAAAIKAVLERAGVEAGEVDEVILGQVL-PAGEGQNPARQAAMKAGLPQEKTAWGMNQLCGSGLRAVALGMQQIATGDAKVIVAGGMESMSMAPHCAHLRGGVKMGDYKMIDTMIKDGLTDAFYGYHMGITAENVARKWQLTREEQDEFALASQNKAEAAQKAGRFADEIVPFVVK 206
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: FADA_PSEF5 (3-ketoacyl-CoA thiolase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=fadA PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 4.571e-18 Identity = 60/191 (31.41%), Postives = 99/191 (51.83%), Query Frame = 2 Query: 2 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPV 571 VVIV RT + ++K G ++T A+D+ A ++ ++E+ +++P+EV D++ G V RMA+ P T +TV+R C S + A+ A AI G D+ + G+E M +S++ V+P + A MG+T+E + + G+TR++QD GKFKDEIIP+ Sbjct: 8 VVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKLLERNAKVDPAEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAGQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHM--GHVSMMHGVDPNPHMSLYAAKASGMMGLTAEMLGKMHGITREQQDAFGVRSHQLAHKATVEGKFKDEIIPM 196
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: FADA_PSEU2 (3-ketoacyl-CoA thiolase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=fadA PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 7.797e-18 Identity = 60/191 (31.41%), Postives = 98/191 (51.31%), Query Frame = 2 Query: 2 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPV 571 VVIV RT + ++K G ++T A+D+ A ++ ++E+ +++P+EV D++ G V RMA+ P T +TV+R C S + A+ A AI D+ I G+E M +S++ V+P + A MG+T+E + + G+TR++QD GKFKDEIIP+ Sbjct: 8 VVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKLLERNNKVDPAEVEDVIWGCVNQTLEQGWNIARMASLLTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTNNGDVFIIGGVEHM--GHVSMMHGVDPNPHMSLHAAKASGMMGLTAEMLGKMHGITREQQDAFGLRSHQLAHKATLEGKFKDEIIPM 196
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: FADA_PSESM (3-ketoacyl-CoA thiolase OS=Pseudomonas syringae pv. tomato GN=fadA PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.018e-17 Identity = 59/191 (30.89%), Postives = 98/191 (51.31%), Query Frame = 2 Query: 2 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPV 571 VVIV RT + ++K G ++T A+D+ A ++ ++E+ +++P+EV D++ G V RMA+ P T +TV+R C S + A+ A AI D+ + G+E M +S++ V+P + A MG+T+E + + G+TR++QD GKFKDEIIP+ Sbjct: 8 VVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKLLERNNKVDPAEVEDVIWGCVNQTLEQGWNIARMASLLTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTNNGDVFVIGGVEHM--GHVSMMHGVDPNPHMSLHAAKASGMMGLTAEMLGKMHGITREQQDAFGLRSHQLAHKATLEGKFKDEIIPM 196
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: FADA_PSE14 (3-ketoacyl-CoA thiolase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=fadA PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.018e-17 Identity = 59/191 (30.89%), Postives = 98/191 (51.31%), Query Frame = 2 Query: 2 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPV 571 VVIV RT + ++K G ++T A+D+ A ++ ++E+ +++P+EV D++ G V RMA+ P T +TV+R C S + A+ A AI D+ + G+E M +S++ V+P + A MG+T+E + + G+TR++QD GKFKDEIIP+ Sbjct: 8 VVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKLLERNNKVDPAEVEDVIWGCVNQTLEQGWNIARMASLLTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTNNGDVFVIGGVEHM--GHVSMMHGVDPNPHMSLHAAKASGMMGLTAEMLGKMHGITREQQDAFGLRSHQLAHKATLEGKFKDEIIPM 196
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: FADA_SACD2 (3-ketoacyl-CoA thiolase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=fadA PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.330e-17 Identity = 59/189 (31.22%), Postives = 92/189 (48.68%), Query Frame = 2 Query: 2 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTR-LNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEII 565 VVIV RT + ++K G +++ ADDL A ++ ++ + L+P+++ D++ G V+ G R AG P TVP +TVNR C S + A+ A I AGL D+ + G+E M I + V+P + MG+T+E ++ G+TR+ D GKF EII Sbjct: 8 VVIVDYARTPMGRSKNGCYRNVRADDLSADLITGLLARNAALDPAQIDDMIWGCVMQRGEQGFNVARNILLRAGLPHTVPAQTVNRLCGSSMSALHTAAANIMAGLGDVYLVGGVEHM--GHIDMNQHVDPNPALGHSVAQAAGSMGLTAEYLSLLHGITREAMDEFGARSHRKAAEATEQGKFAREII 194
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: FADA_ACIBT (3-ketoacyl-CoA thiolase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=fadA PE=3 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 1.737e-17 Identity = 61/190 (32.11%), Postives = 94/190 (49.47%), Query Frame = 2 Query: 2 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPV 571 VVIV R+A+ K+K G F++ AD L A +++A+I + + + +EV D++ G V R AG P+TV +TVNR C S +QA+ A I DI I G+E M + ++ ++ E MG+T+E + + G+TR+EQD G+FK+EII V Sbjct: 9 VVIVDGVRSAMGKSKNGMFRNVRADSLSAELVRALIARNQFDVNEVEDLIWGCVNQTLEQGMNIGRNIGLLAGLPKTVAGQTVNRLCGSSMQAIHTAAAQIATNQGDIFIIGGVEHM--GHVGMMHGIDLNPEASKHYAKASNMMGLTAEMLGRMNGITREEQDTFGVESHRRAWAATQEGRFKNEIIGV 196
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: FADA_ACIBY (3-ketoacyl-CoA thiolase OS=Acinetobacter baumannii (strain AYE) GN=fadA PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.268e-17 Identity = 60/190 (31.58%), Postives = 94/190 (49.47%), Query Frame = 2 Query: 2 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPV 571 VVIV R+A+ K+K G F++ AD L A +++A++ + + + +EV D++ G V R AG P+TV +TVNR C S +QA+ A I DI I G+E M + ++ ++ E MG+T+E + + G+TR+EQD G+FK+EII V Sbjct: 9 VVIVDGVRSAMGKSKNGMFRNVRADSLSAELVRALVARNQFDVNEVEDLIWGCVNQTLEQGMNIGRNIGLLAGLPKTVAGQTVNRLCGSSMQAIHTAAAQIATNQGDIFIIGGVEHM--GHVGMMHGIDLNPEASKHYAKASNMMGLTAEMLGRMNGITREEQDAFGVESHRRAWAATQEGRFKNEIIGV 196
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: FADA_ACIBS (3-ketoacyl-CoA thiolase OS=Acinetobacter baumannii (strain SDF) GN=fadA PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.268e-17 Identity = 60/190 (31.58%), Postives = 94/190 (49.47%), Query Frame = 2 Query: 2 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPV 571 VVIV R+A+ K+K G F++ AD L A +++A++ + + + +EV D++ G V R AG P+TV +TVNR C S +QA+ A I DI I G+E M + ++ ++ E MG+T+E + + G+TR+EQD G+FK+EII V Sbjct: 9 VVIVDGVRSAMGKSKNGMFRNVRADSLSAELVRALVARNQFDVNEVEDLIWGCVNQTLEQGMNIGRNIGLLAGLPKTVAGQTVNRLCGSSMQAIHTAAAQIATNQGDIFIIGGVEHM--GHVGMMHGIDLNPEASKHYAKASNMMGLTAEMLGRMNGITREEQDAFGVESHRRAWAATQEGRFKNEIIGV 196 The following BLAST results are available for this feature:
BLAST of FC876429 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 176
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876429 ID=FC876429; Name=FC876429; organism=Citrus clementina; type=EST; length=639bpback to top |