FC876430

Overview
NameFC876430
Unique NameFC876430
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length699
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC876430_ssr13 microsatellite FC876430_ssr13:13..24. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig82 contig Ccv1_Contig82:145..843. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876430 vs. ExPASy Swiss-Prot
Match: MAO1_ERWCT (NAD-dependent malic enzyme OS=Erwinia carotovora subsp. atroseptica GN=sfcA PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 7.523e-36
Identity = 73/159 (45.91%), Postives = 112/159 (70.44%), Query Frame = 2
Query:  215 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVG 691
            +G  LL  P  NKG AFTE+ER    L GLLP AV + + Q ++     ++++  ++K+V +  +++ NE LFY+LL  ++ E++P++YTPTVGEAC+ +  I+RR +GL+IS   +  I ++L+N  +++++VIVVTDGERILGLGD G  GMGIP+G
Sbjct:   16 AGPILLEFPLLNKGSAFTEEERADFNLAGLLPEAVETIEEQAERAWRQYQEFKHDIEKHVYLRNIQDTNETLFYRLLDGHLNEMMPIIYTPTVGEACEHFSDIYRRARGLFISYPNRANIDDMLQNATKQNVKVIVVTDGERILGLGDQGIGGMGIPIG 174          
BLAST of FC876430 vs. ExPASy Swiss-Prot
Match: MAO1_AERS4 (NAD-dependent malic enzyme OS=Aeromonas salmonicida (strain A449) GN=sfcA PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 7.523e-36
Identity = 76/177 (42.94%), Postives = 118/177 (66.67%), Query Frame = 2
Query:  161 EDRATEDQLVTPWTISVASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVG 691
            ED   +  L  P+     +G  LL  P  NKG AFT +ER +  L GLLP  + + + Q ++       +   L K++ +  +++ NE LFY+LL +++ E+LPV+YTPTVG+AC+++ +I+RR +GL+IS  +K +I ++L+N  +++++VIVVTDGERILGLGD G  GMGIP+G
Sbjct:    3 EDNNQKRPLYIPY-----AGPALLETPLLNKGCAFTSEERSSFNLEGLLPQNIETIEEQAERAYRQFMAFGNDLDKHIYLRNIQDTNETLFYRLLHNHLTEMLPVIYTPTVGKACEEFSNIYRRARGLFISYPDKDRIDDMLQNATKQNVKVIVVTDGERILGLGDQGIGGMGIPIG 174          
BLAST of FC876430 vs. ExPASy Swiss-Prot
Match: MAO1_SERP5 (NAD-dependent malic enzyme OS=Serratia proteamaculans (strain 568) GN=sfcA PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.283e-35
Identity = 72/159 (45.28%), Postives = 112/159 (70.44%), Query Frame = 2
Query:  215 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVG 691
            +G  LL  P  NKG AFTE+ER+   L+GLLP AV + + Q ++     + ++    K++ +  +++ NE LFY+LL  ++ E++P++YTPTVGEAC+ +  I+RR +GL+IS   + +I ++L+N  +++++VIVVTDGERILGLGD G  GMGIP+G
Sbjct:   16 AGPILLEFPLLNKGSAFTEEERNHFNLQGLLPDAVETIEEQAERAYRQYQDFKNDSDKHIYLRNIQDTNETLFYRLLDSHLSEMMPIIYTPTVGEACEHFSDIYRRARGLFISYPNRDRIDDMLQNATKQNVKVIVVTDGERILGLGDQGIGGMGIPIG 174          
BLAST of FC876430 vs. ExPASy Swiss-Prot
Match: MAO1_AERHH (NAD-dependent malic enzyme OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=sfcA PE=3 SV=2)

HSP 1 Score: 149.058 bits (375), Expect = 2.189e-35
Identity = 75/177 (42.37%), Postives = 117/177 (66.10%), Query Frame = 2
Query:  161 EDRATEDQLVTPWTISVASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVG 691
            ED   +  L  P+     +G  LL  P  NKG AFT +ER    L GLLP  + + + Q ++       +   + K++ +  +++ NE LFY+LL +++ E+LPV+YTPTVG+AC+++ +I+RR +GL+IS  +K +I ++L+N  +++++VIVVTDGERILGLGD G  GMGIP+G
Sbjct:    3 EDNNQKRPLYIPY-----AGPALLETPLLNKGSAFTSEERSNFNLEGLLPQNIETIEEQAERAYRQFMAFGNDMDKHIYLRNIQDTNETLFYRLLTNHLTEMLPVIYTPTVGKACEEFSNIYRRARGLFISYPDKDRIDDMLQNATKQNVKVIVVTDGERILGLGDQGIGGMGIPIG 174          
BLAST of FC876430 vs. ExPASy Swiss-Prot
Match: MAO12_PHOPR (NAD-dependent malic enzyme 2 OS=Photobacterium profundum GN=sfcA2 PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.734e-35
Identity = 66/159 (41.51%), Postives = 111/159 (69.81%), Query Frame = 2
Query:  215 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVG 691
            +G  LL +   NKG AF+ +ER    L GLLP A+ S   QE++  +  + +   + K++ +  +++ NE L+Y+L+ +++EE++P++YTPTVG AC+++ +I+RR +GL++   +KG I+++L N   + +++IV+TDGERILGLGD G  GMGIP+G
Sbjct:   13 AGPTLLENALLNKGSAFSPEERQNFSLMGLLPAAIESITEQEERAYSQYQTFNDDMDKHIYLRNIQDTNETLYYRLIDNHIEEMMPIIYTPTVGAACEQFSNIYRRGRGLFLGYPDKGNIVDILNNAARQDVKIIVITDGERILGLGDQGIGGMGIPIG 171          
BLAST of FC876430 vs. ExPASy Swiss-Prot
Match: MAO1_PHOLL (NAD-dependent malic enzyme OS=Photorhabdus luminescens subsp. laumondii GN=sfcA PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 6.369e-35
Identity = 74/159 (46.54%), Postives = 108/159 (67.92%), Query Frame = 2
Query:  215 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVG 691
            SG  LL  P  NKG AFTE+ER    L GLLP AV + + Q ++       ++    K++ +  +++ NE LFY+LL  ++ E++P++YTPTVGEAC+ +  I+RR +GL+IS   K  I ++L+N  +++++VIVVTDGERILGLGD G  GMGIP+G
Sbjct:   16 SGPILLEFPLLNKGSAFTEEERRNFNLHGLLPEAVETIEEQAERAYRQYLDFKNDADKHIYLRNIQDTNETLFYRLLDAHLNEMMPIIYTPTVGEACEHFSDIYRRARGLFISHPNKAHIDDMLQNATKQNVKVIVVTDGERILGLGDQGIGGMGIPIG 174          
BLAST of FC876430 vs. ExPASy Swiss-Prot
Match: MAO1_VIBFM (NAD-dependent malic enzyme OS=Vibrio fischeri (strain MJ11) GN=sfcA PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 8.318e-35
Identity = 70/159 (44.03%), Postives = 108/159 (67.92%), Query Frame = 2
Query:  215 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVG 691
            +G  LL  P  NKG AF+  ER    L GLLP A+ S + Q  +     + +E  + K++ +  +++ NE LFY+L+ +++ E++P++YTPTVG AC+ + +I+RR +GL+IS + K +I ++L N   ++++VIVVTDGERILGLGD G  GMGIP+G
Sbjct:   13 AGPALLSTPLLNKGSAFSTTERKYFNLEGLLPEAIESIEEQTGRAYKQYQSFENDMDKHIYLRNIQDTNETLFYRLVQNHISEMMPIIYTPTVGAACENFSNIYRRGRGLFISYENKNRIDDLLNNAANQNVKVIVVTDGERILGLGDQGIGGMGIPIG 171          
BLAST of FC876430 vs. ExPASy Swiss-Prot
Match: MAO1_VIBF1 (NAD-dependent malic enzyme OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=sfcA PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 8.318e-35
Identity = 70/159 (44.03%), Postives = 108/159 (67.92%), Query Frame = 2
Query:  215 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVG 691
            +G  LL  P  NKG AF+  ER    L GLLP A+ S + Q  +     + +E  + K++ +  +++ NE LFY+L+ +++ E++P++YTPTVG AC+ + +I+RR +GL+IS + K +I ++L N   ++++VIVVTDGERILGLGD G  GMGIP+G
Sbjct:   13 AGPALLSTPLLNKGSAFSTTERKYFNLEGLLPEAIESIEEQTGRAYKQYQNFENDMDKHIYLRNIQDTNETLFYRLVQNHISEMMPIIYTPTVGAACENFSNIYRRGRGLFISYENKNRIDDLLNNAANQNVKVIVVTDGERILGLGDQGIGGMGIPIG 171          
BLAST of FC876430 vs. ExPASy Swiss-Prot
Match: MAO1_SHEAM (NAD-dependent malic enzyme OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=sfcA PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 8.318e-35
Identity = 70/159 (44.03%), Postives = 106/159 (66.67%), Query Frame = 2
Query:  215 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVG 691
            +G  +L  P  NKG AFTE+ER    L GLLP A+ + + Q  +  +  R +   L K++ +  +++ NE LFY+L+ +N+ E++P++YTPTVG AC+++   +RR +GL+IS   K +I ++L N     +++IVVTDGERILGLGD G  GMGIP+G
Sbjct:   13 AGPAILEAPLINKGSAFTEEERIFFNLEGLLPYAIETIEEQASRAYDQFRSFNNDLDKHIYLRNIQDTNETLFYRLVQNNIAEMMPIIYTPTVGLACERFSKNYRRNRGLFISYPNKDRIDDILNNSTRHKVKIIVVTDGERILGLGDQGIGGMGIPIG 171          
BLAST of FC876430 vs. ExPASy Swiss-Prot
Match: MAO1_ALISL (NAD-dependent malic enzyme OS=Aliivibrio salmonicida (strain LFI1238) GN=sfcA PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 8.318e-35
Identity = 70/159 (44.03%), Postives = 108/159 (67.92%), Query Frame = 2
Query:  215 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVG 691
            +G  LL  P  NKG AF+  ER    L GLLP A+ S + Q  +     + +E  + K++ +  +++ NE LFY+L+ +++ E++P++YTPTVG AC+ + +I+RR +GL+IS + K +I ++L N   ++++VIVVTDGERILGLGD G  GMGIP+G
Sbjct:   13 AGPALLSTPLLNKGSAFSTTERKYFNLEGLLPEAIESIEEQTGRAYKQYQSFENDMDKHIYLRNIQDTNETLFYRLVQNHISEMMPIIYTPTVGAACENFSNIYRRGRGLFISYENKNRIDDLLNNAANQNVKVIVVTDGERILGLGDQGIGGMGIPIG 171          
The following BLAST results are available for this feature:
BLAST of FC876430 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAO1_ERWCT7.523e-3645.91NAD-dependent malic enzyme OS=Erwinia carotovora s... [more]
MAO1_AERS47.523e-3642.94NAD-dependent malic enzyme OS=Aeromonas salmonicid... [more]
MAO1_SERP51.283e-3545.28NAD-dependent malic enzyme OS=Serratia proteamacul... [more]
MAO1_AERHH2.189e-3542.37NAD-dependent malic enzyme OS=Aeromonas hydrophila... [more]
MAO12_PHOPR3.734e-3541.51NAD-dependent malic enzyme 2 OS=Photobacterium pro... [more]
MAO1_PHOLL6.369e-3546.54NAD-dependent malic enzyme OS=Photorhabdus lumines... [more]
MAO1_VIBFM8.318e-3544.03NAD-dependent malic enzyme OS=Vibrio fischeri (str... [more]
MAO1_VIBF18.318e-3544.03NAD-dependent malic enzyme OS=Vibrio fischeri (str... [more]
MAO1_SHEAM8.318e-3544.03NAD-dependent malic enzyme OS=Shewanella amazonens... [more]
MAO1_ALISL8.318e-3544.03NAD-dependent malic enzyme OS=Aliivibrio salmonici... [more]

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Properties
Property NameValue
Genbank descriptionC32004F11EF DevOvary1 Citrus clementina cDNA clone C32004F11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876430 ID=FC876430; Name=FC876430; organism=Citrus clementina; type=EST; length=699bp
GAAGGGAGTGAGTGTTTGTTTGTTTTCGTTTTTGTGAAAAGCAGAAAAAG
TAAAAAGAGTGAGAATGGAGAGCACCATGAAGGAGATGAGAGACGGAGCT
TCGGTTCTCGACTTCGACTCGAAATCCACCGTCGAAGGCGGCGTTGAAGA
CGTCTACGGTGAGGATCGTGCCACCGAGGACCAGCTCGTCACTCCCTGGA
CCATCTCTGTTGCCAGCGGGTACTGTTTGTTGAGGGATCCACGCCATAAC
AAAGGGCTTGCTTTCACTGAGAAAGAGAGGGATGCCCACTACTTGCGCGG
CCTTTTGCCTCCAGCTGTTATAAGTCAACAACTTCAGGAGAAGAAATTGA
TGAACAGCATCAGACAATATGAAGTTCCGCTGCAAAAATATGTGGCCATG
ATGGAACTTGAGGAGAGAAATGAAAGACTGTTCTATAAGCTACTGATTGA
TAATGTTGAGGAACTTCTCCCAGTCGTTTACACTCCAACTGTTGGTGAAG
CTTGCCAGAAATATGGAAGTATCTTCAGGCGTCCTCAGGGTCTATACATA
AGTCTGAAAGAGAAGGGAAAGATTCTTGAGGTTTTGAAGAACTGGCCTGA
AAGGAGTATTCAGGTTATTGTTGTCACAGATGGTGAGCGCATTTTGGGAC
TTGGGGATCTTGGCTGTCAGGGGATGGGAATTCCTGTTGGGAATTGGCT
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