FC876431

Overview
NameFC876431
Unique NameFC876431
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length670
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig952 contig Ccv1_Contig952:10..679. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876431 vs. ExPASy Swiss-Prot
Match: INO1_MESCR (Inositol-3-phosphate synthase OS=Mesembryanthemum crystallinum PE=2 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 2.075e-64
Identity = 118/137 (86.13%), Postives = 127/137 (92.70%), Query Frame = 2
Query:  266 MFIENFKVESPNVKYTDNEIHSVYDYETTELVHENRN--GTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNXD 670
            MFIE+FKVESPNVKYT+NEI SVY+Y+TTELVHENR   G YQWIVKPKTV+Y FKTD  VPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKD +QQANYFGSLTQAS+IRVGS+NGEEIYAPFKS+LPMVN D
Sbjct:    1 MFIESFKVESPNVKYTENEIESVYNYDTTELVHENRKDAGGYQWIVKPKTVQYHFKTDTRVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDKIQQANYFGSLTQASSIRVGSFNGEEIYAPFKSLLPMVNPD 137          
BLAST of FC876431 vs. ExPASy Swiss-Prot
Match: INO1_SPIPO (Inositol-3-phosphate synthase OS=Spirodela polyrrhiza GN=TUR1 PE=2 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 4.326e-62
Identity = 111/135 (82.22%), Postives = 123/135 (91.11%), Query Frame = 2
Query:  266 MFIENFKVESPNVKYTDNEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNXD 670
            MFIE F+VESPNVKY D EI SVY YETTELVHE RNG+YQW+VKPK+V+Y+FKTD  VP+LGVMLVGWGGNNGSTLT GVIANREGISW TK+ VQQANYFGSLTQ+S+IRVGS+NGEEIYAPFKS+LPMVN D
Sbjct:    1 MFIEKFRVESPNVKYGDGEIESVYSYETTELVHEVRNGSYQWVVKPKSVQYQFKTDTRVPRLGVMLVGWGGNNGSTLTAGVIANREGISWVTKEKVQQANYFGSLTQSSSIRVGSFNGEEIYAPFKSLLPMVNPD 135          
BLAST of FC876431 vs. ExPASy Swiss-Prot
Match: INO1_MAIZE (Inositol-3-phosphate synthase OS=Zea mays PE=2 SV=2)

HSP 1 Score: 219.935 bits (559), Expect = 9.334e-57
Identity = 104/135 (77.04%), Postives = 118/135 (87.41%), Query Frame = 2
Query:  266 MFIENFKVESPNVKYTDNEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNXD 670
            MFIE+F+VESP+V+Y   EI S Y Y+TTELVHE ++G  +W+V+PK+VKY F+T   VPKLGVMLVGWGGNNGSTLT GVIANREGISWATKD VQQANY+GSLTQAS IRVGSYNGEEIYAPFKS+LPMVN D
Sbjct:    1 MFIESFRVESPHVRYGPMEIESEYRYDTTELVHEGKDGASRWVVRPKSVKYNFRTRTAVPKLGVMLVGWGGNNGSTLTAGVIANREGISWATKDKVQQANYYGSLTQASTIRVGSYNGEEIYAPFKSLLPMVNPD 135          
BLAST of FC876431 vs. ExPASy Swiss-Prot
Match: INO1_ORYSJ (Inositol-3-phosphate synthase OS=Oryza sativa subsp. japonica GN=INO1 PE=2 SV=2)

HSP 1 Score: 219.164 bits (557), Expect = 1.592e-56
Identity = 104/135 (77.04%), Postives = 118/135 (87.41%), Query Frame = 2
Query:  266 MFIENFKVESPNVKYTDNEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNXD 670
            MFIE+F+VESP+V+Y   EI S Y Y+TTELVHE+ +G  +WIV+PK+V+Y F+T   VPKLGVMLVGWGGNNGSTLT GVIANREGISWATKD VQQANY+GSLTQAS IRVGSYNGEEIYAPFKS+LPMVN D
Sbjct:    1 MFIESFRVESPHVRYGAAEIESDYQYDTTELVHESHDGASRWIVRPKSVRYNFRTTTTVPKLGVMLVGWGGNNGSTLTAGVIANREGISWATKDKVQQANYYGSLTQASTIRVGSYNGEEIYAPFKSLLPMVNPD 135          
BLAST of FC876431 vs. ExPASy Swiss-Prot
Match: INO1_HORVU (Inositol-3-phosphate synthase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.079e-56
Identity = 104/135 (77.04%), Postives = 116/135 (85.93%), Query Frame = 2
Query:  266 MFIENFKVESPNVKYTDNEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNXD 670
            MFIE+F+VESP V+Y   EI S Y Y+TTELVHE+ +G  +W+V+PK+V Y FKT+  VPKLGVMLVGWGGNNGSTL  GVIANREGISWATKD VQQANYFGSLTQAS IRVGSYNGEEIYAPFKS+LPMVN D
Sbjct:    1 MFIESFRVESPKVRYGAGEIESEYRYDTTELVHESHDGASKWVVRPKSVNYHFKTNTTVPKLGVMLVGWGGNNGSTLMAGVIANREGISWATKDKVQQANYFGSLTQASTIRVGSYNGEEIYAPFKSLLPMVNPD 135          
BLAST of FC876431 vs. ExPASy Swiss-Prot
Match: INO1_DICDI (Inositol-3-phosphate synthase OS=Dictyostelium discoideum GN=ino1 PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.773e-31
Identity = 71/131 (54.20%), Postives = 94/131 (71.76%), Query Frame = 2
Query:  275 ENFKVESPNVKYTDNEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTVQQANYFGSLTQASAIRVG-SYNGEEIYAPFKSILPMVN 664
            E+FKV SPNVKYTD  I S Y Y+TT++  +N NG  + IV+P   KY FKT+  VP++GVM+VG  GNNG+T+ GGVIANREG+ W TK  +Q  NYFGS+  +S IR+G   NG + Y P K+++PMV+
Sbjct:    7 ESFKVNSPNVKYTDEHIISDYTYQTTKV--QNVNG--ELIVEPVDQKYIFKTERKVPRMGVMIVGLCGNNGTTVVGGVIANREGLCWNTKQGLQTPNYFGSVVMSSTIRMGMDENGCDAYIPLKNLIPMVH 133          
BLAST of FC876431 vs. ExPASy Swiss-Prot
Match: INO1B_XENLA (Inositol-3-phosphate synthase 1-B OS=Xenopus laevis GN=isyna1-B PE=2 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 8.797e-31
Identity = 67/130 (51.54%), Postives = 92/130 (70.77%), Query Frame = 2
Query:  275 ENFKVESPNVKYTDNEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVN 664
            E FKVESP+V+Y  + I + Y Y+TT+ V+E +  T    VKP + K+ F T+  VPKLGVMLVGWGGNNG+T+T  V+ANR G+SW TK   + ANY+GSL Q+S + +G  +  E++ PF+ +LPMVN
Sbjct:    3 EMFKVESPHVRYLKDVIEADYSYDTTQ-VYEEKGVTK---VKPCSTKFTFHTERKVPKLGVMLVGWGGNNGTTVTAAVLANRLGLSWMTKTGKKVANYYGSLFQSSTVCLGRGSSGEVFVPFRDLLPMVN 128          
BLAST of FC876431 vs. ExPASy Swiss-Prot
Match: INO1A_XENLA (Inositol-3-phosphate synthase 1-A OS=Xenopus laevis GN=isyna1-A PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 5.702e-30
Identity = 66/130 (50.77%), Postives = 92/130 (70.77%), Query Frame = 2
Query:  275 ENFKVESPNVKYTDNEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVN 664
            E FKVESP+V+Y  + I + Y+Y+TT+ V+E +  T    VKP + K+ F T+  VPKLGVMLVGWGGNNG+T+T  V+ANR G+SW TK   + ANY+GSL Q+S   +GS    +++ PF+ +LPMV+
Sbjct:    3 EKFKVESPHVRYLKDVIEADYNYDTTQ-VYEEKGVTK---VKPCSTKFTFHTERKVPKLGVMLVGWGGNNGTTVTAAVLANRLGLSWMTKTGKKVANYYGSLFQSSTACLGSGPAGDVFVPFRDLLPMVH 128          
BLAST of FC876431 vs. ExPASy Swiss-Prot
Match: INO1_BOVIN (Inositol-3-phosphate synthase 1 OS=Bos taurus GN=ISYNA1 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.086e-28
Identity = 64/131 (48.85%), Postives = 87/131 (66.41%), Query Frame = 2
Query:  281 FKVESPNVKYTDNEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTVQQANYFGSLTQASAIRVG-SYNGEEIYAPFKSILPMVNXD 670
            F VESP+V Y+   I + Y+Y TT +  E   G  +  V P + ++ F+T   VP+LGVMLVGWGGNNGSTLT  V+ANR  +SW T+   ++ANY+GSLTQA  + +G    G+E++ PF S+LPMV  D
Sbjct:    7 FVVESPDVVYSPETIEAQYEYRTTSVSREG--GVLK--VHPTSTRFTFRTARQVPRLGVMLVGWGGNNGSTLTAAVLANRLRLSWPTRTGRKEANYYGSLTQAGTVSLGLDAEGKEVFVPFSSLLPMVAPD 133          
BLAST of FC876431 vs. ExPASy Swiss-Prot
Match: INO1_DROME (Inositol-3-phosphate synthase OS=Drosophila melanogaster GN=Inos PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.553e-27
Identity = 63/130 (48.46%), Postives = 84/130 (64.62%), Query Frame = 2
Query:  284 KVESPNVKYTDNEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTVQQANYFGSLTQASAIRVGS-YNGEEIYAPFKSILPMVNXD 670
            +V SP V+  D  I + YDY+T+   H  R    Q  V P+T   + +T  HVPKLGVMLVGWGGNNGSTLT  + ANR  + W  +  VQ+AN++GS+TQAS + +GS  +G ++Y P K +LPMV  D
Sbjct:   10 EVISPKVQVDDEFITTDYDYQTS---HVKRTADGQLQVHPQTTSLKIRTGRHVPKLGVMLVGWGGNNGSTLTAALEANRRQLKWRKRTGVQEANWYGSITQASTVFIGSDEDGGDVYVPMKELLPMVEPD 136          
The following BLAST results are available for this feature:
BLAST of FC876431 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
INO1_MESCR2.075e-6486.13Inositol-3-phosphate synthase OS=Mesembryanthemum ... [more]
INO1_SPIPO4.326e-6282.22Inositol-3-phosphate synthase OS=Spirodela polyrrh... [more]
INO1_MAIZE9.334e-5777.04Inositol-3-phosphate synthase OS=Zea mays PE=2 SV=... [more]
INO1_ORYSJ1.592e-5677.04Inositol-3-phosphate synthase OS=Oryza sativa subs... [more]
INO1_HORVU2.079e-5677.04Inositol-3-phosphate synthase OS=Hordeum vulgare P... [more]
INO1_DICDI1.773e-3154.20Inositol-3-phosphate synthase OS=Dictyostelium dis... [more]
INO1B_XENLA8.797e-3151.54Inositol-3-phosphate synthase 1-B OS=Xenopus laevi... [more]
INO1A_XENLA5.702e-3050.77Inositol-3-phosphate synthase 1-A OS=Xenopus laevi... [more]
INO1_BOVIN4.086e-2848.85Inositol-3-phosphate synthase 1 OS=Bos taurus GN=I... [more]
INO1_DROME1.553e-2748.46Inositol-3-phosphate synthase OS=Drosophila melano... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC32004F12EF DevOvary1 Citrus clementina cDNA clone C32004F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876431 ID=FC876431; Name=FC876431; organism=Citrus clementina; type=EST; length=670bp
GACAGATTACCAAGCTAGTTTCGAAAGTTAAAATAGTGTTGAGTCGAGTG
GGAAGTGAGAATTGAGAAGGAGAGTCGAGTTCGGAGACAGCAAGACGAAA
CAGCTCTTCTTCCAATAAATCTCAAAGCATTTGTTTGGTTTTATTTAAAG
CAATTTTCTCAGCAAACTCTTCTTCTAATAAATTTTAAAGCATTTGTTTG
GTTTTTATTTAAAGCAATTTTCTCAGCGAAGTTTTCAATTTTTTCTCTAA
AATTTTCCTGGGAAAATGTTTATCGAAAATTTCAAGGTTGAGAGCCCAAA
TGTGAAGTACACAGATAATGAGATTCACTCTGTGTACGATTATGAAACCA
CTGAGCTTGTTCATGAGAACAGAAATGGCACTTATCAGTGGATTGTCAAG
CCCAAAACTGTCAAATATGAGTTCAAAACCGATGTTCATGTCCCTAAACT
TGGGGTTATGCTTGTGGGTTGGGGTGGAAACAACGGCTCAACTCTCACGG
GTGGTGTTATCGCGAATCGAGAGGGAATCTCCTGGGCCACAAAGGACACA
GTGCAACAAGCCAATTATTTTGGTTCACTTACCCAAGCATCAGCAATTAG
AGTTGGGTCTTACAATGGAGAGGAGATTTATGCTCCATTCAAGAGCATTC
TCCCTATGGTGAACCNAGAT
back to top