FC876447
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876447 vs. ExPASy Swiss-Prot
Match: DBP10_KLULA (ATP-dependent RNA helicase DBP10 OS=Kluyveromyces lactis GN=DBP10 PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 5.552e-18 Identity = 49/134 (36.57%), Postives = 75/134 (55.97%), Query Frame = 3 Query: 219 NAKTAQLEKFTNPDPNSTTTDSTVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHRLA--EDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDL 614 N L + N ++ +FA GL++ + + G R+PTP+Q IP IL+ +D++G+A+TGSGKTAAF LP++ +L GV A++++P+RELA Q FK G LR ++ GG L Sbjct: 103 NESDDDLNDYFNTTADAAAKHKKGSFASFGLSKLVLINISKKGFRQPTPIQRKTIPLILQKRDIVGMARTGSGKTAAFVLPMIEKLKTHSAKIGVRAVILSPSRELAIQTHRVFKEFSKGSDLRSILLTGGDSL 236
BLAST of FC876447 vs. ExPASy Swiss-Prot
Match: DBP10_DEBHA (ATP-dependent RNA helicase DBP10 OS=Debaryomyces hansenii GN=DBP10 PE=3 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 5.552e-18 Identity = 45/110 (40.91%), Postives = 70/110 (63.64%), Query Frame = 3 Query: 291 TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHRLAEDP--YGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDL 614 +F G +++ + + G ++PTP+Q IP I+E +DV+G+A+TGSGKTAAF LP++ +L GV A++++P+RELA Q +Q K G LR V++GG L Sbjct: 98 SFPSFGFSKFLLTNISKKGFKQPTPIQRKTIPLIMENRDVVGMARTGSGKTAAFTLPLVEKLKSHSPRVGVRAIILSPSRELASQTFKQVKEFSKGTDLRSIVLIGGDSL 207
BLAST of FC876447 vs. ExPASy Swiss-Prot
Match: DBP10_ASHGO (ATP-dependent RNA helicase DBP10 OS=Ashbya gossypii GN=DBP10 PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 9.470e-18 Identity = 44/107 (41.12%), Postives = 69/107 (64.49%), Query Frame = 3 Query: 291 TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHRLA--EDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGG 605 +FA GL+++ + G R+PTP+Q IP IL+ +D++G+A+TGSGKTAAF LP++ +L G A++++P+RELA Q + FK G +LR ++ GG Sbjct: 121 SFASFGLSKFILGNISRKGFRQPTPIQRKTIPLILQQRDIVGMARTGSGKTAAFVLPLIEKLKMHSAKIGARAMILSPSRELAMQTHKVFKEFAKGSNLRSVLLTGG 227
BLAST of FC876447 vs. ExPASy Swiss-Prot
Match: DBP10_VANPO (ATP-dependent RNA helicase DBP10 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=DBP10 PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.615e-17 Identity = 44/110 (40.00%), Postives = 67/110 (60.91%), Query Frame = 3 Query: 291 TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHRLA--EDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDL 614 +F G ++ + + G R+PTP+Q IP IL+ +D++G+A+TGSGKTAAF LP++ +L G A++++P+RELA Q FK G HLR ++ GG L Sbjct: 122 SFPSFGFSKLILSNVHKKGFRQPTPIQRKTIPLILQKRDIVGMARTGSGKTAAFVLPMIEKLKSHSSKIGARAVILSPSRELALQTHRVFKEFSKGTHLRSVLLTGGDSL 231
BLAST of FC876447 vs. ExPASy Swiss-Prot
Match: DBP10_YEAST (ATP-dependent RNA helicase DBP10 OS=Saccharomyces cerevisiae GN=DBP10 PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.755e-17 Identity = 45/110 (40.91%), Postives = 67/110 (60.91%), Query Frame = 3 Query: 291 TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHRLA--EDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDL 614 +F GL++ + K G R+PTP+Q IP IL+ +D++G+A+TGSGKTAAF LP++ +L G A++++P+RELA Q FK G LR ++ GG L Sbjct: 138 SFPSFGLSKIVLNNIKRKGFRQPTPIQRKTIPLILQSRDIVGMARTGSGKTAAFILPMVEKLKSHSGKIGARAVILSPSRELAMQTFNVFKDFARGTELRSVLLTGGDSL 247
BLAST of FC876447 vs. ExPASy Swiss-Prot
Match: DBP10_YEAS7 (ATP-dependent RNA helicase DBP10 OS=Saccharomyces cerevisiae (strain YJM789) GN=DBP10 PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.755e-17 Identity = 45/110 (40.91%), Postives = 67/110 (60.91%), Query Frame = 3 Query: 291 TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHRLA--EDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDL 614 +F GL++ + K G R+PTP+Q IP IL+ +D++G+A+TGSGKTAAF LP++ +L G A++++P+RELA Q FK G LR ++ GG L Sbjct: 138 SFPSFGLSKIVLNNIKRKGFRQPTPIQRKTIPLILQSRDIVGMARTGSGKTAAFILPMVEKLKSHSGKIGARAVILSPSRELAMQTFNVFKDFARGTELRSVLLTGGDSL 247
BLAST of FC876447 vs. ExPASy Swiss-Prot
Match: DBP10_PICST (ATP-dependent RNA helicase DBP10 OS=Pichia stipitis GN=DBP10 PE=3 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 2.755e-17 Identity = 45/110 (40.91%), Postives = 68/110 (61.82%), Query Frame = 3 Query: 291 TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHRLA--EDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDL 614 +F GL++ + + G R+PTP+Q IP I+ +DV+G+A+TGSGKTAAF LP++ +L G+ A++++P+RELA Q +Q K G LR V+ GG L Sbjct: 100 SFQSFGLSKLVLTNIAKKGYRQPTPIQRKTIPLIMANRDVVGMARTGSGKTAAFTLPVIEKLKGHSARVGIRAIILSPSRELALQTYKQVKEFSKGSDLRAIVLTGGDSL 209
BLAST of FC876447 vs. ExPASy Swiss-Prot
Match: DRS1_CRYNE (ATP-dependent RNA helicase DRS1 OS=Cryptococcus neoformans GN=DRS1 PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.599e-17 Identity = 59/140 (42.14%), Postives = 78/140 (55.71%), Query Frame = 3 Query: 222 AKTAQLEKFTNPDPNSTTTDSTV--TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHRLAEDPYG-----VLALVITPTRELAYQLAEQFKALG--SGLHLRCEVVVGGMDL 614 A+ A+ + F + DP TTTD T+ +F + L+ ++ L PTP+Q IP L G+D+LG A TGSGKTAAF +PIL RL G LV+ PTRELA Q KAL GL +R ++VGG+ L Sbjct: 200 AEIARKDAFFSSDP--TTTDPTLPSSFTAMNLSRPLLRALTSLQFTAPTPIQARAIPLALLGRDILGSAVTGSGKTAAFMVPILERLCYRDRGKGGAACRVLVLCPTRELAVQCEAVGKALAEKGGLDVRFALLVGGLSL 337
BLAST of FC876447 vs. ExPASy Swiss-Prot
Match: CSHA_BACLD (DEAD-box ATP-dependent RNA helicase cshA OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=cshA PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.599e-17 Identity = 43/110 (39.09%), Postives = 64/110 (58.18%), Query Frame = 3 Query: 285 TVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHRLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDL 614 T+TF L+ + K +G TP+Q IP L KDV+G AQTG+GKTAAF +P++ ++ + + A+VI PTRELA Q++E+ +G R + GG D+ Sbjct: 2 TITFQDFQLSSDLTKAIKRMGFEEATPIQAQTIPLGLANKDVIGQAQTGTGKTAAFGIPLVEKINPESPNIQAIVIAPTRELAIQVSEELYKIGQDKRARVLPIYGGQDI 111
BLAST of FC876447 vs. ExPASy Swiss-Prot
Match: PRP5_NEUCR (Pre-mRNA-processing ATP-dependent RNA helicase prp-5 OS=Neurospora crassa GN=prp-5 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 4.700e-17 Identity = 46/105 (43.81%), Postives = 63/105 (60.00%), Query Frame = 3 Query: 306 GLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPIL-HRLAEDPY----GVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGG 605 GL + T + LG +PTP+Q +P I+ G+DV+G+A+TGSGKT AFALP+L H +DP G +AL++TPTREL Q+ + L LR GG Sbjct: 567 GLTRPILDTIESLGFEKPTPIQMQALPVIMSGRDVIGVAKTGSGKTMAFALPMLRHVKDQDPVTGDDGAIALIMTPTRELCTQIYSDLQPFAKALKLRVVAAYGG 671 The following BLAST results are available for this feature:
BLAST of FC876447 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876447 ID=FC876447; Name=FC876447; organism=Citrus clementina; type=EST; length=617bpback to top |