FC876447
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876447 vs. ExPASy Swiss-Prot
Match: DBP8_ASPNC (ATP-dependent RNA helicase dbp8 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=dbp8 PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.782e-24 Identity = 50/112 (44.64%), Postives = 79/112 (70.54%), Query Frame = 3 Query: 279 DSTVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHRLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDL 614 D+ +FA L +A W + + + +R+PT +Q CIP+IL G+D +G ++TGSGKT AF++P+L + AEDP+G+ LV+TPTRELA Q+ EQ KA+ + ++ ++ GG D+ Sbjct: 89 DAQNSFASLNVAPWLIGSLTTMAVRKPTAIQKACIPEILNGRDCIGGSRTGSGKTIAFSVPMLQKWAEDPFGIFGLVLTPTRELALQIYEQIKAISAPQSMKPLLITGGTDM 200
BLAST of FC876447 vs. ExPASy Swiss-Prot
Match: DBP8_EMENI (ATP-dependent RNA helicase dbp8 OS=Emericella nidulans GN=dbp8 PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.039e-24 Identity = 49/108 (45.37%), Postives = 78/108 (72.22%), Query Frame = 3 Query: 291 TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHRLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDL 614 +F L +A W V + + +R+PT +Q CIP+IL+G+D +G ++TGSGKT AF++PIL + AEDP+G+ A+++TPTRELA Q+ EQ KA+ + ++ ++ GG D+ Sbjct: 96 SFKALNVAPWLVGSLTTMAVRKPTAIQRACIPEILKGRDCIGGSRTGSGKTIAFSVPILQKWAEDPFGIFAVILTPTRELALQIFEQIKAISAPQSMKPVLITGGTDM 203
BLAST of FC876447 vs. ExPASy Swiss-Prot
Match: RRP3_VANPO (ATP-dependent rRNA helicase RRP3 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=RRP3 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 3.969e-24 Identity = 53/109 (48.62%), Postives = 74/109 (67.89%), Query Frame = 3 Query: 291 TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHRLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLL 617 +F+ L L ++ CK L +PTP+Q IP L+G D++GLAQTGSGKTAAFA+PIL+RL D A ++ PTRELA Q+ E F +LGS + +R +VGGM+++ Sbjct: 87 SFSDLDLVPELIEACKNLNFAKPTPIQARSIPPALQGHDIIGLAQTGSGKTAAFAIPILNRLWHDQQPYYACILAPTRELAQQIKETFDSLGSLMGVRSACIVGGMNMM 195
BLAST of FC876447 vs. ExPASy Swiss-Prot
Match: RRP3_ASHGO (ATP-dependent rRNA helicase RRP3 OS=Ashbya gossypii GN=RRP3 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 3.969e-24 Identity = 60/157 (38.22%), Postives = 87/157 (55.41%), Query Frame = 3 Query: 147 LFAKPKSKTRSKXXXXXXXXXXSKNAKTAQLEKFTNPDPNSTTTDSTVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHRLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLL 617 L K K K ++ A TA + + + + +F L L ++ C L +PTP+Q+ IP L+GKD++GLAQTGSGKTAAFA+PIL+RL D A ++ PTRELA Q+ E F +LGS + +R +VGGM+++ Sbjct: 19 LAEKIKQKALENRKQSREESQATEEANTASETEAAVIEETAEPEEGFSSFRELDLVPELIEACDNLNFTKPTPIQSKAIPPALQGKDIIGLAQTGSGKTAAFAIPILNRLWHDQQPYYACILAPTRELAQQIKETFDSLGSLMGVRTTCIVGGMNMM 175
BLAST of FC876447 vs. ExPASy Swiss-Prot
Match: DBP8_NEOFI (ATP-dependent RNA helicase dbp8 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=dbp8 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 3.969e-24 Identity = 49/108 (45.37%), Postives = 78/108 (72.22%), Query Frame = 3 Query: 291 TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHRLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDL 614 +FA L +A W V + + +R+PT +Q CIP+IL+G+D +G ++TGSGKT AF++P+L + AEDP+G+ +V+TPTRELA Q+ EQ KA+ + ++ ++ GG D+ Sbjct: 97 SFAALNVAPWLVGSLTTMAVRKPTAIQKACIPEILKGRDCIGGSRTGSGKTIAFSVPMLQKWAEDPFGIFGVVLTPTRELALQIFEQIKAISAPQSMKPVLITGGTDM 204
BLAST of FC876447 vs. ExPASy Swiss-Prot
Match: DBP8_ASPFU (ATP-dependent RNA helicase dbp8 OS=Aspergillus fumigatus GN=dbp8 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 3.969e-24 Identity = 49/108 (45.37%), Postives = 78/108 (72.22%), Query Frame = 3 Query: 291 TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHRLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDL 614 +FA L +A W V + + +R+PT +Q CIP+IL+G+D +G ++TGSGKT AF++P+L + AEDP+G+ +V+TPTRELA Q+ EQ KA+ + ++ ++ GG D+ Sbjct: 97 SFAALNVAPWLVGSLTTMAVRKPTAIQKACIPEILKGRDCIGGSRTGSGKTIAFSVPMLQKWAEDPFGIFGVVLTPTRELALQIFEQIKAISAPQSMKPVLITGGTDM 204
BLAST of FC876447 vs. ExPASy Swiss-Prot
Match: DBP8_PHANO (ATP-dependent RNA helicase DBP8 OS=Phaeosphaeria nodorum GN=DBP8 PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 5.184e-24 Identity = 55/130 (42.31%), Postives = 84/130 (64.62%), Query Frame = 3 Query: 222 AKTAQLEKFTNPDPNSTTTDSTVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHRLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMD 611 A + K + P+ N V+FA + +A W V + + ++RPT +Q CIP+IL+G+D +G ++TG+GKT AF++PIL + AEDP G+ L+ITPTRELA Q+ EQ KA+ + ++ +V GG D Sbjct: 58 ASRVAVSKASVPEENGK---EKVSFASIDVAPWLVASLASMEIKRPTGIQKACIPEILKGRDCIGGSRTGTGKTVAFSVPILQKWAEDPSGIFGLIITPTRELAIQIYEQVKAISAPQSMKPILVTGGSD 184
BLAST of FC876447 vs. ExPASy Swiss-Prot
Match: DBP8_ASPCL (ATP-dependent RNA helicase dbp8 OS=Aspergillus clavatus GN=dbp8 PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 5.184e-24 Identity = 50/108 (46.30%), Postives = 76/108 (70.37%), Query Frame = 3 Query: 291 TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHRLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDL 614 +F+ L +A W V + L +R+PT +Q CIP+IL GKD +G ++TGSGKT AF++P+L + AEDP G+ L++TPTRELA Q+ EQ KA+ + ++ ++ GG D+ Sbjct: 94 SFSALNVAPWLVGSLTTLAVRKPTAIQKACIPEILNGKDCIGGSRTGSGKTIAFSVPMLQKWAEDPLGIFGLILTPTRELALQIFEQIKAISAPQSMKPVLITGGTDM 201
BLAST of FC876447 vs. ExPASy Swiss-Prot
Match: RRP3_PICST (ATP-dependent rRNA helicase RRP3 OS=Pichia stipitis GN=RRP3 PE=3 SV=3) HSP 1 Score: 110.538 bits (275), Expect = 6.771e-24 Identity = 62/141 (43.97%), Postives = 86/141 (60.99%), Query Frame = 3 Query: 225 KTAQLEKFTNPDPNSTTT-------DSTV---TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHRLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLL 617 K QLE+ + P+ + + D V TF+ L L ++ +++ +PTP+Q+ IP LEGKD++GLAQTGSGKTAAFA+PIL L E LV+ P RELAYQ+ E F ALGS + +R +VGGMD++ Sbjct: 40 KKQQLEEESKPESSQKSKNIVEVNPDDEVKFSTFSELKLVPELLEAIQQMKFSKPTPIQSEAIPHALEGKDIIGLAQTGSGKTAAFAIPILQSLWEAQTPYFGLVLAPARELAYQIKETFDALGSTMGVRTVCLVGGMDMM 180
BLAST of FC876447 vs. ExPASy Swiss-Prot
Match: DBP8_NEUCR (ATP-dependent RNA helicase dbp-8 OS=Neurospora crassa GN=dbp-8 PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.155e-23 Identity = 57/137 (41.61%), Postives = 86/137 (62.77%), Query Frame = 3 Query: 225 KTAQLEKFTN----PDPNSTTT---DSTVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHRLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDL 614 KT + E+ T P+P ST + D+ TF L + W VQ+ + ++RPT +Q CIP+IL+G+D +G ++TGSGKT AFA+PIL + A +P + +++TPTRELA Q+ EQ AL L+ ++ GG D+ Sbjct: 167 KTEKTEEATPALPVPEPASTVSVPIDANTTFDALNVRPWLVQSLANMAIKRPTGIQKGCIPEILKGRDCIGGSRTGSGKTVAFAVPILQQWAANPSAIFGVILTPTRELALQIMEQVIALSQPHVLKAVLITGGADM 303 The following BLAST results are available for this feature:
BLAST of FC876447 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876447 ID=FC876447; Name=FC876447; organism=Citrus clementina; type=EST; length=617bpback to top |