FC876448
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_CYAP7 (Diaminopimelate epimerase OS=Cyanothece sp. (strain PCC 7424) GN=dapF PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 3.025e-35 Identity = 64/88 (72.73%), Postives = 77/88 (87.50%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELE 589 + F KYHGLGNDFIL+DNR+ +EP ++PE A ++CDR+FGIGADGVIF +PG + TDY MRIFNSDGSEPEMCGNG+RC A+FIAELE Sbjct: 3 IEFTKYHGLGNDFILIDNRHGSEPMVSPEMAVEMCDRHFGIGADGVIFVLPGTSQTDYQMRIFNSDGSEPEMCGNGIRCLAQFIAELE 90
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_CYAP4 (Diaminopimelate epimerase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=dapF PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 8.801e-35 Identity = 67/102 (65.69%), Postives = 77/102 (75.49%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELEN--LNGKQSFTVHT 625 L F KY GLGNDFIL+DNRN P +TPEQA +CDR+FG+GADGVIF +P TDYTMRIFNSDGSEPEMCGNG+RC ARF A+LE L + +HT Sbjct: 3 LQFTKYQGLGNDFILIDNRNEATPLLTPEQAVDICDRHFGVGADGVIFLLPATGETDYTMRIFNSDGSEPEMCGNGIRCLARFAADLEGHALTATPRYRIHT 104
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_MICAN (Diaminopimelate epimerase OS=Microcystis aeruginosa (strain NIES-843) GN=dapF PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 1.961e-34 Identity = 69/99 (69.70%), Postives = 80/99 (80.81%), Query Frame = 2 Query: 332 FVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNG-KQSFTVHT 625 F KY GLGNDFIL+DNR+S EP IT E A +CDR+FGIGADGVIFA+PG TDYTMRIFNSDGSEPEMCGNG+RC A+FIA LE N +++ +HT Sbjct: 5 FTKYQGLGNDFILIDNRHSPEPLITAEMAVAMCDRHFGIGADGVIFALPGQAETDYTMRIFNSDGSEPEMCGNGIRCLAQFIARLEANNAIGRTYRIHT 103
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_CYAP8 (Diaminopimelate epimerase OS=Cyanothece sp. (strain PCC 8801) GN=dapF PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 1.961e-34 Identity = 65/88 (73.86%), Postives = 75/88 (85.23%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELE 589 + F KY GLGNDFIL+DNR+S P ++PEQA K+CDR+FGIGADGVIF +PG TDYTMRIFNSDGSEP+MCGNG+RC ARFIA LE Sbjct: 3 IEFSKYQGLGNDFILIDNRSSHTPLVSPEQAIKMCDRHFGIGADGVIFVLPGTANTDYTMRIFNSDGSEPQMCGNGIRCLARFIAHLE 90
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_ACAM1 (Diaminopimelate epimerase OS=Acaryochloris marina (strain MBIC 11017) GN=dapF PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 5.704e-34 Identity = 65/102 (63.73%), Postives = 80/102 (78.43%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELEN--LNGKQSFTVHT 625 + F KY GLGNDFIL+DNR+ +P +TP+QA ++CDRNFGIG DGVIFA+P TDYTMRI+NSDGSEPEMCGNG+RC ARF+A LE L ++ +HT Sbjct: 3 VEFTKYQGLGNDFILIDNRHQAQPCLTPDQAVQMCDRNFGIGGDGVIFALPPEGDTDYTMRIYNSDGSEPEMCGNGIRCLARFLAHLEGKPLQTDITYRIHT 104
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_SYNJA (Diaminopimelate epimerase OS=Synechococcus sp. (strain JA-3-3Ab) GN=dapF PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 4.520e-31 Identity = 60/100 (60.00%), Postives = 76/100 (76.00%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHT 625 L F KY GLGNDFILVDNR+ +P +TPE+A LC+R FG+GADGVIF +PG G D++MR+FNSDGSE EMCGNG+RC ARF+ +L ++ +HT Sbjct: 5 LSFHKYQGLGNDFILVDNRHQPQPCLTPEEAVALCNRRFGVGADGVIFLLPGQEGADFSMRLFNSDGSEAEMCGNGIRCLARFLQDLGIPGQDGAYQIHT 104
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_SYNJB (Diaminopimelate epimerase OS=Synechococcus sp. GN=dapF PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 2.930e-30 Identity = 59/100 (59.00%), Postives = 76/100 (76.00%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHT 625 L F KY GLGNDFILVDNR ++P ++PE+A LC+R FG+GADGVIF +PG G D++MR+FNSDGSE EMCGNG+RC ARF+ +L ++ +HT Sbjct: 5 LSFHKYQGLGNDFILVDNRWQSQPCLSPEEAVALCNRRFGVGADGVIFLLPGQEGADFSMRLFNSDGSEAEMCGNGIRCLARFLQDLGIPGRDGAYQIHT 104
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_THEEB (Diaminopimelate epimerase OS=Thermosynechococcus elongatus (strain BP-1) GN=dapF PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.152e-26 Identity = 53/88 (60.23%), Postives = 68/88 (77.27%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELE 589 L F KY GLGNDF+L+DNR+ E +TPEQA+ CDR+FG+GADGVIF + G +DY MR++N+DGS +MCGNG+RC A+FI LE Sbjct: 3 LSFQKYQGLGNDFLLIDNRHQEELLLTPEQAQFWCDRHFGVGADGVIFLLRGTGESDYRMRMYNADGSVAQMCGNGIRCLAKFIFALE 90
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_MOOTA (Diaminopimelate epimerase OS=Moorella thermoacetica (strain ATCC 39073) GN=dapF PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.318e-22 Identity = 50/94 (53.19%), Postives = 62/94 (65.96%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQ 607 +HFVK HGLGNDF+LV+ P P A ++C R FGIGADG+I +P MRIFN DGSEPEMCGNG+RCFAR++ E G++ Sbjct: 1 MHFVKMHGLGNDFVLVNAMTEKVPGDLPGLARRVCHRRFGIGADGLILVLPSEQAR-LRMRIFNPDGSEPEMCGNGIRCFARYVYETGLAEGEE 93
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_PROMM (Diaminopimelate epimerase OS=Prochlorococcus marinus (strain MIT 9313) GN=dapF PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.936e-22 Identity = 53/104 (50.96%), Postives = 69/104 (66.35%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNS--TEPRITPEQA--EKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHT 625 L F KY GLGNDF+L+D R T+ I P+ A K+CDR+FGIGADG+I A+P D M+IFN+DGS EMCGNG+RC RF+A++E Q + + T Sbjct: 5 LQFSKYQGLGNDFLLIDGREDQLTQQVINPDPAWVRKICDRHFGIGADGLILALPPRADGDLRMQIFNADGSLAEMCGNGIRCLTRFLADIEGDLCVQRWNIET 108 The following BLAST results are available for this feature:
BLAST of FC876448 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 318
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876448 ID=FC876448; Name=FC876448; organism=Citrus clementina; type=EST; length=625bpback to top |