FC876448
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_PELTS (Diaminopimelate epimerase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=dapF PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 7.233e-21 Identity = 47/87 (54.02%), Postives = 61/87 (70.11%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDN-RNSTEPRITPEQAEKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAE 583 +HF K HGLGNDFILVD + P P A K+CDR+FG+GADG++ +P + D +MRIFN DGSE EMCGN +RC A+++ E Sbjct: 1 MHFTKAHGLGNDFILVDCFKEKVNPEDFPGLAVKMCDRHFGVGADGLVLLLPSPSA-DVSMRIFNPDGSEAEMCGNAIRCVAKYLYE 86
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_DESHD (Diaminopimelate epimerase OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=dapF PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 7.233e-21 Identity = 47/86 (54.65%), Postives = 58/86 (67.44%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRIT--PEQAEKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFI 577 + VK HGLGNDF+ +D+ + PE A KLC R FG+G DG+I +P + D MRI NSDGSEPEMCGNG+RCFAR+I Sbjct: 1 MEIVKMHGLGNDFVFIDHFQGAPAELPDYPELARKLCHRQFGVGGDGLIMVLPS-DKADARMRILNSDGSEPEMCGNGIRCFARYI 85
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_DESAH (Diaminopimelate epimerase OS=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) GN=dapF PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.611e-20 Identity = 50/102 (49.02%), Postives = 66/102 (64.71%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQ--AEKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHT 625 L+F K GLGNDF+++D+RN + P A+KLC R FG+G DG+I + D +IFN DGSEPEMCGNG+RCFA+ + E + + KQ FTV T Sbjct: 3 LNFTKMEGLGNDFVMLDDRNGAIVQTVPYPVLAKKLCSRRFGVGGDGIIIIIDSETA-DVGFKIFNPDGSEPEMCGNGMRCFAKLVFE-QGIVTKQRFTVET 102
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_NATTJ (Diaminopimelate epimerase OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=dapF PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.748e-20 Identity = 49/97 (50.52%), Postives = 65/97 (67.01%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMPGVNGT---DYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQ 607 + F K HGLGNDFIL+ + R P+ A++LCDR FGIGADG++ N DY MRI+NSDGSE EMCGN +RC A+++A+ E +GK+ Sbjct: 1 MKFEKMHGLGNDFILMKDFQ----RNYPDLAKRLCDRRFGIGADGLVIYSSCKNSNINADYQMRIYNSDGSEAEMCGNAIRCLAKYLAKTEETDGKR 93
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_CARHZ (Diaminopimelate epimerase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=dapF PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.748e-20 Identity = 49/97 (50.52%), Postives = 65/97 (67.01%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVD---NRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQ 607 + F+K HGLGNDF++VD N+N ++ + A+K+CDR FGIGADG++ +P D+ MRI NSDGSE EMCGN +RC AR+ E N KQ Sbjct: 1 MEFLKMHGLGNDFVVVDEIKNQNLVNKNLS-DLAKKICDRRFGIGADGLVLLLPSEKA-DFKMRIINSDGSEAEMCGNAIRCVARYYVEKYNPAKKQ 95
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_THETN (Diaminopimelate epimerase OS=Thermoanaerobacter tengcongensis GN=dapF PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 3.590e-20 Identity = 52/100 (52.00%), Postives = 67/100 (67.00%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHT 625 + F K HGLGNDFI+++ + E E A KLCDR+FGIGADG++ P + D MRIFN+DGSE EMCGNG RCFA+++ E + + KQ TV T Sbjct: 1 MRFTKMHGLGNDFIVIE---AVEGVDYSELAVKLCDRHFGIGADGLLVVEPS-HIADIKMRIFNADGSEAEMCGNGSRCFAKYVYE-KGIVSKQKMTVET 95
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_ELUMP (Diaminopimelate epimerase OS=Elusimicrobium minutum (strain Pei191) GN=dapF PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 7.997e-20 Identity = 51/98 (52.04%), Postives = 65/98 (66.33%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQA--EKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSF 613 + FVKY GLGNDFIL+D + +I A +KLCDR+FGIGADG+I P + DY +RI NSDG+EPEMCGNG+RC RF+ + K +F Sbjct: 1 MEFVKYQGLGNDFILID---CVKIKIDGLNALGKKLCDRHFGIGADGLIAVFPSASA-DYKIRIINSDGTEPEMCGNGIRCAMRFVFDYIKPQRKLTF 94
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_CELJU (Diaminopimelate epimerase OS=Cellvibrio japonicus (strain Ueda107) GN=dapF PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 7.997e-20 Identity = 50/101 (49.50%), Postives = 64/101 (63.37%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFA-MPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHT 625 + F K HGLGNDF+++D + T R+TPE+ KL DR+FG+G D V+ +P D+ RIFN DGSE E CGNG RCFA F+ E L GK+ V T Sbjct: 3 IRFSKMHGLGNDFVVIDGISQTV-RLTPEKIRKLADRHFGVGCDQVLLVEIPEQPNVDFRYRIFNCDGSEVENCGNGARCFAVFVRE-RRLTGKRVIRVET 101
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_LEPIN (Diaminopimelate epimerase OS=Leptospira interrogans GN=dapF PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.781e-19 Identity = 44/84 (52.38%), Postives = 61/84 (72.62%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFI 577 L F K G+GND++ +D+ + + R+TPEQ +K+ DRNFGIG+DGVIF G D+ M ++NSDGS EMCGNG+RC A++I Sbjct: 4 LKFTKMEGIGNDYVYIDSTRN-DIRLTPEQIQKISDRNFGIGSDGVIFIRNSKQG-DFMMDMYNSDGSSSEMCGNGIRCVAKYI 85
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_LEPIC (Diaminopimelate epimerase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=dapF PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.781e-19 Identity = 44/84 (52.38%), Postives = 61/84 (72.62%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFI 577 L F K G+GND++ +D+ + + R+TPEQ +K+ DRNFGIG+DGVIF G D+ M ++NSDGS EMCGNG+RC A++I Sbjct: 4 LKFTKMEGIGNDYVYIDSTRN-DIRLTPEQIQKISDRNFGIGSDGVIFIRNSKQG-DFMMDMYNSDGSSSEMCGNGIRCVAKYI 85 The following BLAST results are available for this feature:
BLAST of FC876448 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 318
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876448 ID=FC876448; Name=FC876448; organism=Citrus clementina; type=EST; length=625bpback to top |