FC876448
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_COXB2 (Diaminopimelate epimerase OS=Coxiella burnetii (strain CbuG_Q212) GN=dapF PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.726e-14 Identity = 41/101 (40.59%), Postives = 60/101 (59.41%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMPGVNGT-DYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHT 625 ++F K G GNDF+++D T ++T Q +K+ +R FG+G D ++ P N + D+ RIFN+DGSE CGNG RC ARFI L+ ++ V T Sbjct: 3 VNFTKMQGSGNDFVVID-ATKTPFQLTTSQIQKMANRRFGVGFDQLLVIEPPKNNSVDFHFRIFNADGSEVGQCGNGARCIARFI-RAHQLSDREELRVST 101
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_COXB1 (Diaminopimelate epimerase OS=Coxiella burnetii (strain CbuK_Q154) GN=dapF PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.726e-14 Identity = 41/101 (40.59%), Postives = 60/101 (59.41%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMPGVNGT-DYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHT 625 ++F K G GNDF+++D T ++T Q +K+ +R FG+G D ++ P N + D+ RIFN+DGSE CGNG RC ARFI L+ ++ V T Sbjct: 3 VNFTKMQGSGNDFVVID-ATKTPFQLTTSQIQKMANRRFGVGFDQLLVIEPPKNNSVDFHFRIFNADGSEVGQCGNGARCIARFI-RAHQLSDREELRVST 101
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_VARPS (Diaminopimelate epimerase OS=Variovorax paradoxus (strain S110) GN=dapF PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.943e-14 Identity = 42/104 (40.38%), Postives = 56/104 (53.85%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMP----GVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHT 625 + F K G GNDF+++D T +T Q L DR+FG+GAD ++ P G D+ I N+DG E E CGNG RCF RF+ E +L K + V T Sbjct: 3 IRFTKMQGAGNDFVVLDETRGTLG-LTAAQYRFLADRHFGVGADQILTVRPPSKGAAEGVDFQYVIHNADGGEVEQCGNGARCFMRFVRE-HHLTDKDTVRVET 104
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_NEIMA (Diaminopimelate epimerase OS=Neisseria meningitidis serogroup A GN=dapF PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.943e-14 Identity = 45/103 (43.69%), Postives = 58/103 (56.31%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAE--KLCDRNFGIGADGV-IFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHT 625 L F K HGLGNDF+++D + TPE A DR G+G D + + G D+ RIFN+DGSE CGNG RCFARF+A+ + L K+ V T Sbjct: 4 LKFTKMHGLGNDFMVID---AVSQDFTPEDAPIAAWADRFRGVGFDQLLVVGRSETEGVDFRYRIFNADGSEVGQCGNGARCFARFVAD-KGLTDKKEICVET 102
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_LEGPA (Diaminopimelate epimerase OS=Legionella pneumophila (strain Paris) GN=dapF PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.943e-14 Identity = 44/101 (43.56%), Postives = 58/101 (57.43%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADG-VIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHT 625 + F K HGLGNDFI++D N + ++T +Q +KL +R+ GIG D ++ G D+ RIFN+DG E CGNG RC A F A L K TV T Sbjct: 3 IKFTKMHGLGNDFIVLDGVNQSI-QLTVKQIQKLANRHTGIGFDQCLLIESSQTEGIDFNYRIFNADGQEVGQCGNGARCIALF-ARYYGLTAKNKLTVAT 101
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_BRAHW (Diaminopimelate epimerase OS=Brachyspira hyodysenteriae (strain ATCC 49526 / WA1) GN=dapF PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.943e-14 Identity = 42/87 (48.28%), Postives = 54/87 (62.07%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEK----LCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARF 574 L F K HG GND+I + N + + T E A K L R++ IGADG+I MP + D MR+FN DGSE EMCGNG+RC A++ Sbjct: 3 LSFTKMHGTGNDYIYI---NCFKEKFTVEDAIKYSPILSHRHYSIGADGIILIMPS-DKADVQMRMFNYDGSESEMCGNGIRCVAKY 85
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_SPHAL (Diaminopimelate epimerase OS=Sphingopyxis alaskensis GN=dapF PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 3.844e-14 Identity = 43/93 (46.24%), Postives = 54/93 (58.06%), Query Frame = 2 Query: 332 FVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFI---AELENLNG 601 F K HGLGNDF+++D R + +TP +A + DR GIG D +I P + D MRIFN+DG E E CGN RC A I A +E L G Sbjct: 5 FTKMHGLGNDFVVIDARVAPV-EMTPARAHAIADRRHGIGCDQLILLEPSTSA-DVKMRIFNADGGEVEACGNATRCVATLIGKPAVIETLAG 95
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_EUBR3 (Diaminopimelate epimerase OS=Eubacterium rectale (strain ATCC 33656 / VPI 0990) GN=dapF PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.020e-14 Identity = 42/102 (41.18%), Postives = 61/102 (59.80%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKL--CDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHT 625 + F K HG GND++ V N E ++ + DR+FGIG+DG+I P + D+ MRI+N+DGSE EMCGNG+RC A+++ + L K +V T Sbjct: 1 MKFTKMHGCGNDYVYV---NLFEEKLDDPARVSIYVSDRHFGIGSDGLITIGPS-DKADFRMRIYNADGSEAEMCGNGIRCVAKYVYD-HKLTDKTEISVET 97
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_DIAST (Diaminopimelate epimerase OS=Diaphorobacter sp. (strain TPSY) GN=dapF PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.020e-14 Identity = 41/103 (39.81%), Postives = 60/103 (58.25%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRI--TPEQAEKLCDRNFGIGADGVIFAMPGVN-GTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHT 625 + F K G GNDF+++D T+ R+ TP Q L DR+FG+GAD ++ P G D+ I N+DG + E CGNG RCFAR++ + + L + + V T Sbjct: 3 IRFTKMQGAGNDFVVLDE---TQGRLGLTPAQYRFLADRHFGVGADQILTVRPSPGAGIDFEYVIHNADGGQVEQCGNGARCFARYVRD-KGLTAQDTIRVQT 101
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_RALME (Diaminopimelate epimerase OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=dapF PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 8.564e-14 Identity = 42/99 (42.42%), Postives = 57/99 (57.58%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMPGV-NGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTV 619 L F K HG GNDFI++D + + +T Q L +R+FGIGAD ++ + D+ RI N+DG E E CGNG RCF RF+ + + KQS V Sbjct: 3 LQFTKMHGAGNDFIVLDGIHQ-KLDLTDAQWRALANRHFGIGADQILIVEKSSRDDVDFRYRIVNADGGEVEHCGNGARCFVRFVTD-RGMTDKQSVRV 99 The following BLAST results are available for this feature:
BLAST of FC876448 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 318
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876448 ID=FC876448; Name=FC876448; organism=Citrus clementina; type=EST; length=625bpback to top |