FC876448
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_XANAC (Diaminopimelate epimerase OS=Xanthomonas axonopodis pv. citri GN=dapF PE=3 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 9.468e-13 Identity = 40/98 (40.82%), Postives = 53/98 (54.08%), Query Frame = 2 Query: 317 SGFLHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVI-FAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQ 607 SG L F K HG GNDF+++D R+ T P A +L DR+FGIG D ++ P G I+NSDGS CGNG RC A ++ G++ Sbjct: 7 SGRLRFTKMHGAGNDFVVLDLRDGTPPP-DAALAAQLADRHFGIGCDQILTIEAPRSEGAAAAYGIWNSDGSAARQCGNGARCVAAWLVRDGTAQGER 103
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_RHOCS (Diaminopimelate epimerase OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=dapF PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.237e-12 Identity = 40/99 (40.40%), Postives = 55/99 (55.56%), Query Frame = 2 Query: 332 FVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMPGVN-GTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHT 625 F+K HGLGNDF+++D R P +T A + DR+ G+G D ++ P + D MRI N DGSE CGN RC A +A+ +G+ TV T Sbjct: 5 FLKMHGLGNDFVVLDARRDPLP-LTTAAARAIADRHTGVGCDQIVLLEPPRHPAADLFMRILNPDGSESGACGNATRCVASLVAD---GSGRAEVTVET 99
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_XANC5 (Diaminopimelate epimerase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=dapF PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.615e-12 Identity = 39/98 (39.80%), Postives = 53/98 (54.08%), Query Frame = 2 Query: 317 SGFLHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVI-FAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQ 607 SG L F K HG GNDF+++D R+ T P A +L DR+FG+G D ++ P G I+NSDGS CGNG RC A ++ G++ Sbjct: 7 SGRLRFTKMHGAGNDFVVLDLRDGTPPP-DAALAAQLADRHFGVGCDQILTIEAPRSEGAVAAYGIWNSDGSAARQCGNGARCVAAWLVRDGTAQGER 103
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_GEOTN (Diaminopimelate epimerase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=dapF PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.615e-12 Identity = 43/99 (43.43%), Postives = 55/99 (55.56%), Query Frame = 2 Query: 332 FVKYHGLGNDFILVDNRNSTEPRIT-PEQAEKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHT 625 F K HGLGN +I VD T P P A + D + GIG+DG+I P MRIFNSDGSE + CGNG+RC A++ E + +SF + T Sbjct: 6 FTKMHGLGNSYIYVDLFRETLPEEDLPAIARSVADVHTGIGSDGLILICPSEQAP-VKMRIFNSDGSEGKNCGNGLRCVAKYAYE-HGIVRDRSFLIET 102
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_BAUCH (Diaminopimelate epimerase OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=dapF PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.615e-12 Identity = 39/101 (38.61%), Postives = 58/101 (57.43%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMPGVNGT-DYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHT 625 + F K HGLGNDF++VD ++P + L +R+ G+G D ++F P + D+ RIFN+DGSE CGNG RC A F+ ++ L K+ + T Sbjct: 1 MQFSKMHGLGNDFMVVDVVTQNV-YLSPTKIRFLANRHSGVGFDQLLFVEPPYDPEIDFHYRIFNADGSEVTQCGNGARCLAHFV-RMKKLTNKREIYIST 99
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_XANOM (Diaminopimelate epimerase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=dapF PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.109e-12 Identity = 38/88 (43.18%), Postives = 50/88 (56.82%), Query Frame = 2 Query: 317 SGFLHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVI-FAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFI 577 SG L F K HG GNDF+++D R+ T P A +L DR+FG+G D ++ P G I+NSDGS CGNG RC A ++ Sbjct: 7 SGRLRFTKMHGAGNDFVVLDLRDGTPPP-DAALAAQLADRHFGVGCDQILTIEAPRSEGAVAAYGIWNSDGSAARQCGNGARCVAAWL 93
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_GEOKA (Diaminopimelate epimerase OS=Geobacillus kaustophilus GN=dapF PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.109e-12 Identity = 42/99 (42.42%), Postives = 55/99 (55.56%), Query Frame = 2 Query: 332 FVKYHGLGNDFILVDNRNSTEPRIT-PEQAEKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHT 625 F K HGLGN +I VD T P P A + D + GIG+DG+I P MRIFNSDGSE + CGNG+RC A++ E + ++F + T Sbjct: 6 FTKMHGLGNSYIYVDLFRETLPEEELPAIARSVADVHTGIGSDGLILICPSEKAP-VKMRIFNSDGSEGKNCGNGLRCVAKYAYE-HGIVSDRTFLIET 102
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_BACCR (Diaminopimelate epimerase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=dapF PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.109e-12 Identity = 45/102 (44.12%), Postives = 59/102 (57.84%), Query Frame = 2 Query: 332 FVKYHGLGNDFILVDNRNSTEPRITPEQ----AEKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHT 625 F K HGLGN +I V N E +I E AEK+ + N GIGADG+I P + MR+FN+DGSE + CGNG+RC A++ E L + FT+ T Sbjct: 6 FTKMHGLGNSYIYV---NMFEEQIPEEDLALVAEKVSNINTGIGADGMILICPS-DVAPVKMRMFNNDGSEGKSCGNGLRCVAKYAYE-HKLVEETVFTIET 102
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_BACC4 (Diaminopimelate epimerase OS=Bacillus cereus (strain B4264) GN=dapF PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.109e-12 Identity = 45/102 (44.12%), Postives = 59/102 (57.84%), Query Frame = 2 Query: 332 FVKYHGLGNDFILVDNRNSTEPRITPEQ----AEKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHT 625 F K HGLGN +I V N E +I E AEK+ + N GIGADG+I P + MR+FN+DGSE + CGNG+RC A++ E L + FT+ T Sbjct: 6 FTKMHGLGNSYIYV---NMFEEQIPEEDLALVAEKVSNINTGIGADGMILICPS-DVAPVKMRMFNNDGSEGKSCGNGLRCVAKYAYE-HKLVEETVFTIET 102
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_BACC2 (Diaminopimelate epimerase OS=Bacillus cereus (strain G9842) GN=dapF PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.109e-12 Identity = 45/102 (44.12%), Postives = 59/102 (57.84%), Query Frame = 2 Query: 332 FVKYHGLGNDFILVDNRNSTEPRITPEQ----AEKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHT 625 F K HGLGN +I V N E +I E AEK+ + N GIGADG+I P + MR+FN+DGSE + CGNG+RC A++ E L + FT+ T Sbjct: 6 FTKMHGLGNSYIYV---NMFEEQIPEEDLVLVAEKVSNINTGIGADGMILICPS-DVAPVKMRMFNNDGSEGKSCGNGLRCVAKYAYE-HKLVEETVFTIET 102 The following BLAST results are available for this feature:
BLAST of FC876448 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 318
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876448 ID=FC876448; Name=FC876448; organism=Citrus clementina; type=EST; length=625bpback to top |