FC876448
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_GEOSW (Diaminopimelate epimerase OS=Geobacillus sp. (strain WCH70) GN=dapF PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.755e-12 Identity = 43/99 (43.43%), Postives = 56/99 (56.57%), Query Frame = 2 Query: 332 FVKYHGLGNDFILVDNRNSTEPR-ITPEQAEKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHT 625 F K HGLGN +I V+ T P + A K+ + N GIGADG+I P MRIFNSDGSE + CGNG+RC A++ E + +SF + T Sbjct: 6 FTKMHGLGNSYIYVNMFEETIPESLLSSLAVKVSNVNTGIGADGMILICPS-EVAPVKMRIFNSDGSEGKNCGNGLRCVAKYAYE-HGMVKDRSFFIET 102
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_BACTN (Diaminopimelate epimerase OS=Bacteroides thetaiotaomicron GN=dapF PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.755e-12 Identity = 42/101 (41.58%), Postives = 60/101 (59.41%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQ-AEKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHT 625 + F K HG GND+I VD + P PE+ A + + GIG+DG+I + + D++MRIFN+DGSE MCGNG RC +++ E L K+ T+ T Sbjct: 5 IKFTKMHGAGNDYIYVDT--TRYPIAAPEKKAIEWSKFHTGIGSDGLIL-IGSSDKADFSMRIFNADGSEAMMCGNGSRCVGKYVYEY-GLTAKKEITLDT 101
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_BACHK (Diaminopimelate epimerase OS=Bacillus thuringiensis subsp. konkukian GN=dapF PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.598e-12 Identity = 45/102 (44.12%), Postives = 58/102 (56.86%), Query Frame = 2 Query: 332 FVKYHGLGNDFILVDNRNSTEPRITPEQ----AEKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHT 625 F K HGLGN +I V N E +I E AEK+ + N GIGADG+I P + MR+FN+DGSE + CGNG+RC A++ E L FT+ T Sbjct: 6 FTKMHGLGNSYIYV---NMFEEQIPEEDLALVAEKVSNINTGIGADGMILICPS-DVAPVKMRMFNNDGSEGKSCGNGLRCVAKYAYE-HKLVEDTVFTIET 102
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_BACCZ (Diaminopimelate epimerase OS=Bacillus cereus (strain ZK / E33L) GN=dapF PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.598e-12 Identity = 45/102 (44.12%), Postives = 58/102 (56.86%), Query Frame = 2 Query: 332 FVKYHGLGNDFILVDNRNSTEPRITPEQ----AEKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHT 625 F K HGLGN +I V N E +I E AEK+ + N GIGADG+I P + MR+FN+DGSE + CGNG+RC A++ E L FT+ T Sbjct: 6 FTKMHGLGNSYIYV---NMFEEQIPEEDLALVAEKVSNINTGIGADGMILICPS-DVAPVKMRMFNNDGSEGKSCGNGLRCVAKYAYE-HKLVEDTVFTIET 102
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_BACC7 (Diaminopimelate epimerase OS=Bacillus cereus (strain AH187) GN=dapF PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.598e-12 Identity = 45/102 (44.12%), Postives = 58/102 (56.86%), Query Frame = 2 Query: 332 FVKYHGLGNDFILVDNRNSTEPRITPEQ----AEKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHT 625 F K HGLGN +I V N E +I E AEK+ + N GIGADG+I P + MR+FN+DGSE + CGNG+RC A++ E L FT+ T Sbjct: 6 FTKMHGLGNSYIYV---NMFEEQIPEEDLALVAEKVSNINTGIGADGMILICPS-DVAPVKMRMFNNDGSEGKSCGNGLRCVAKYAYE-HKLVEDTVFTIET 102
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_BACC3 (Diaminopimelate epimerase OS=Bacillus cereus (strain 03BB102) GN=dapF PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.598e-12 Identity = 45/102 (44.12%), Postives = 58/102 (56.86%), Query Frame = 2 Query: 332 FVKYHGLGNDFILVDNRNSTEPRITPEQ----AEKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHT 625 F K HGLGN +I V N E +I E AEK+ + N GIGADG+I P + MR+FN+DGSE + CGNG+RC A++ E L FT+ T Sbjct: 6 FTKMHGLGNSYIYV---NMFEEQIPEEDLALVAEKVSNINTGIGADGMILICPS-DVAPVKMRMFNNDGSEGKSCGNGLRCVAKYAYE-HKLVEDTVFTIET 102
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_BACC1 (Diaminopimelate epimerase OS=Bacillus cereus (strain ATCC 10987) GN=dapF PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.598e-12 Identity = 45/102 (44.12%), Postives = 58/102 (56.86%), Query Frame = 2 Query: 332 FVKYHGLGNDFILVDNRNSTEPRITPEQ----AEKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHT 625 F K HGLGN +I V N E +I E AEK+ + N GIGADG+I P + MR+FN+DGSE + CGNG+RC A++ E L FT+ T Sbjct: 6 FTKMHGLGNSYIYV---NMFEEQIPEEDLALVAEKVSNINTGIGADGMILICPS-DVAPVKMRMFNNDGSEGKSCGNGLRCVAKYAYE-HKLVEDTVFTIET 102
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_BACC0 (Diaminopimelate epimerase OS=Bacillus cereus (strain AH820) GN=dapF PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.598e-12 Identity = 45/102 (44.12%), Postives = 58/102 (56.86%), Query Frame = 2 Query: 332 FVKYHGLGNDFILVDNRNSTEPRITPEQ----AEKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHT 625 F K HGLGN +I V N E +I E AEK+ + N GIGADG+I P + MR+FN+DGSE + CGNG+RC A++ E L FT+ T Sbjct: 6 FTKMHGLGNSYIYV---NMFEEQIPEEDLALVAEKVSNINTGIGADGMILICPS-DVAPVKMRMFNNDGSEGKSCGNGLRCVAKYAYE-HKLVEDTVFTIET 102
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_BACAN (Diaminopimelate epimerase OS=Bacillus anthracis GN=dapF PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.598e-12 Identity = 45/102 (44.12%), Postives = 58/102 (56.86%), Query Frame = 2 Query: 332 FVKYHGLGNDFILVDNRNSTEPRITPEQ----AEKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHT 625 F K HGLGN +I V N E +I E AEK+ + N GIGADG+I P + MR+FN+DGSE + CGNG+RC A++ E L FT+ T Sbjct: 6 FTKMHGLGNSYIYV---NMFEEQIPEEDLALVAEKVSNINTGIGADGMILICPS-DVAPVKMRMFNNDGSEGKSCGNGLRCVAKYAYE-HKLVEDTVFTIET 102
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_BACAH (Diaminopimelate epimerase OS=Bacillus thuringiensis (strain Al Hakam) GN=dapF PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.598e-12 Identity = 45/102 (44.12%), Postives = 58/102 (56.86%), Query Frame = 2 Query: 332 FVKYHGLGNDFILVDNRNSTEPRITPEQ----AEKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHT 625 F K HGLGN +I V N E +I E AEK+ + N GIGADG+I P + MR+FN+DGSE + CGNG+RC A++ E L FT+ T Sbjct: 6 FTKMHGLGNSYIYV---NMFEEQIPEEDLALVAEKVSNINTGIGADGMILICPS-DVAPVKMRMFNNDGSEGKSCGNGLRCVAKYAYE-HKLVEDTVFTIET 102 The following BLAST results are available for this feature:
BLAST of FC876448 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 318
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876448 ID=FC876448; Name=FC876448; organism=Citrus clementina; type=EST; length=625bpback to top |