FC876448
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_RICRS (Diaminopimelate epimerase OS=Rickettsia rickettsii (strain Sheila Smith) GN=dapF PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.367e-11 Identity = 39/98 (39.80%), Postives = 58/98 (59.18%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTV 619 ++FVK HGLGNDF++V+ R+ + + A+ + +R+ GIG D F + + Y M I+N DGS ++CGN RC A+ I L+ GKQ TV Sbjct: 5 INFVKMHGLGNDFVIVNKRDLSSSYDLSQLAKNMAERHTGIGCDQ--FILYEEHNDFYEMIIYNIDGSSAKLCGNATRCLAKLI-YLD--TGKQDITV 97
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_RICRO (Diaminopimelate epimerase OS=Rickettsia rickettsii (strain Iowa) GN=dapF PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.367e-11 Identity = 39/98 (39.80%), Postives = 58/98 (59.18%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTV 619 ++FVK HGLGNDF++V+ R+ + + A+ + +R+ GIG D F + + Y M I+N DGS ++CGN RC A+ I L+ GKQ TV Sbjct: 5 INFVKMHGLGNDFVIVNKRDLSSSYDLSQLAKNMAERHTGIGCDQ--FILYEEHNDFYEMIIYNIDGSSAKLCGNATRCLAKLI-YLD--TGKQDITV 97
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_LISMH (Diaminopimelate epimerase OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=dapF PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.367e-11 Identity = 40/92 (43.48%), Postives = 51/92 (55.43%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQ----AEKLCDRNFGIG-ADGVIFAMPGVN-GTDYTMRIFNSDGSEPEMCGNGVRCFARFIAE 583 +HF K HG NDF LVD + + EQ A KLCDR +G ADG+++ G MR+ NSDGS MCGNG+R AR++ E Sbjct: 4 IHFTKVHGSQNDFFLVDEEENLITEWSDEQRADFAIKLCDRKHSLGGADGILYVTKSSEVGPIGQMRVVNSDGSIASMCGNGLRTVARYLLE 95
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_RICPU (Diaminopimelate epimerase OS=Rickettsia peacockii (strain Rustic) GN=dapF PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.786e-11 Identity = 39/98 (39.80%), Postives = 58/98 (59.18%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTV 619 ++FVK HGLGNDF++V+ R+ + + A+ + +R+ GIG D F + + Y M I+N DGS ++CGN RC A+ I L+ GKQ TV Sbjct: 5 INFVKMHGLGNDFVIVNKRDLSSSYDLSQLAKNMAERHTGIGCDQ--FIIYEEHNDFYEMIIYNIDGSSAKLCGNATRCLAKLI-YLD--TGKQDITV 97
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_RICCN (Diaminopimelate epimerase OS=Rickettsia conorii GN=dapF PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.786e-11 Identity = 39/98 (39.80%), Postives = 58/98 (59.18%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTV 619 ++FVK HGLGNDF++V+ R+ + + A+ + +R+ GIG D F + + Y M I+N DGS ++CGN RC A+ I L+ GKQ TV Sbjct: 5 INFVKMHGLGNDFVIVNKRDLSSSYDLSQLAKNMAERHTGIGCDQ--FIIYEEHNDFYEMIIYNIDGSSAKLCGNATRCLAKLI-YLD--TGKQDITV 97
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_RICAE (Diaminopimelate epimerase OS=Rickettsia africae (strain ESF-5) GN=dapF PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.786e-11 Identity = 39/98 (39.80%), Postives = 58/98 (59.18%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTV 619 ++FVK HGLGNDF++V+ R+ + + A+ + +R+ GIG D F + + Y M I+N DGS ++CGN RC A+ I L+ GKQ TV Sbjct: 5 INFVKMHGLGNDFVIVNKRDLSSSYDLSQLAKNMAERHTGIGCDQ--FIIYEEHNDFYEMIIYNIDGSSAKLCGNATRCLAKLI-YLD--TGKQDITV 97
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_RICTY (Diaminopimelate epimerase OS=Rickettsia typhi GN=dapF PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.332e-11 Identity = 36/84 (42.86%), Postives = 49/84 (58.33%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFI 577 ++FVK HGLGNDF++V R+ + A+ + DR+ GIG D I N YTM I+N DGS ++CGN RC A+ I Sbjct: 5 INFVKMHGLGNDFVIVHKRDLATVCNLSQLAKNMADRHTGIGCDQCIIYEEYNN--VYTMIIYNIDGSNAKLCGNATRCLAKLI 86
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_COREF (Diaminopimelate epimerase OS=Corynebacterium efficiens GN=dapF PE=3 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 2.332e-11 Identity = 42/107 (39.25%), Postives = 59/107 (55.14%), Query Frame = 2 Query: 332 FVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAM---------PGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHT 625 F K H NDFI++ + + T +T ++ +LCDR G+GADGV+ + PGV+ + M N+DGS EMCGNGVR FA ++A L FT+ T Sbjct: 7 FAKGHATENDFIIIHDPDGTID-LTADEVTRLCDRRAGLGADGVLRVVRAGELGVQTPGVDPGWWFMDYRNADGSLAEMCGNGVRVFAHWLA-AHQLVDTTDFTIGT 111
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_RICFE (Diaminopimelate epimerase OS=Rickettsia felis GN=dapF PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.046e-11 Identity = 34/84 (40.48%), Postives = 51/84 (60.71%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFI 577 ++FVK HGLGNDF++V+ R+ + + A+ + DR+ GIG D F + + Y M I+N DGS ++CGN RC A+ I Sbjct: 5 INFVKMHGLGNDFVVVNKRDLSSSYDLSQLAKNMADRHTGIGCDQ--FIIYEEHDDFYEMIIYNIDGSSAKLCGNATRCLAKLI 86
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_RICAH (Diaminopimelate epimerase OS=Rickettsia akari (strain Hartford) GN=dapF PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.046e-11 Identity = 34/84 (40.48%), Postives = 50/84 (59.52%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFI 577 ++FVK HGLGNDF++V+ R+ + A+ + DR+ GIG D F + + Y M I+N DGS ++CGN RC A+ I Sbjct: 5 INFVKMHGLGNDFVIVNKRDLLSSYDLSQLAKNMADRHTGIGCDQ--FIIYEEHNDFYEMIIYNIDGSSAKLCGNATRCLAKLI 86 The following BLAST results are available for this feature:
BLAST of FC876448 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 318
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876448 ID=FC876448; Name=FC876448; organism=Citrus clementina; type=EST; length=625bpback to top |