FC876448
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_BURVG (Diaminopimelate epimerase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=dapF PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 5.183e-19 Identity = 47/99 (47.47%), Postives = 61/99 (61.62%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADG-VIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTV 619 L F K HG GNDF+++D + T P +T Q L DR+FGIGAD ++ P V+G D+ RIFN DG E E CGNG RCF +F+ + L K+S V Sbjct: 3 LSFTKMHGAGNDFVVLDGYSHTLPPLTDVQVRALADRHFGIGADQLLVVEKPTVDGADFKYRIFNCDGGEVEHCGNGARCFVKFVTD-RGLTDKRSVRV 100
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_LEPBA (Diaminopimelate epimerase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=dapF PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 6.770e-19 Identity = 46/100 (46.00%), Postives = 65/100 (65.00%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHT 625 ++F K G+GND++ +D + R++PEQ +KL DRNFGIG DGVIF + N ++ M ++NSDGS EMCGNGVRC +F+ + L Q T+ T Sbjct: 3 INFTKMEGIGNDYVYID-ATKNDIRLSPEQIQKLSDRNFGIGGDGVIF-IRNSNSGEFQMDMYNSDGSSSEMCGNGVRCVGKFVYD-HGLTKNQKPTIET 99
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_BURPS (Diaminopimelate epimerase OS=Burkholderia pseudomallei GN=dapF PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 6.770e-19 Identity = 47/99 (47.47%), Postives = 59/99 (59.60%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFA-MPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTV 619 L F K HG GNDF+++D P +T Q L DR+FGIGAD ++ P V+G D+ RIFN DG E E CGNG RCF +F+ + L GK S V Sbjct: 3 LSFTKMHGAGNDFVVLDGYTRALPPLTGAQVRALADRHFGIGADQLLLVEKPTVDGADFKYRIFNCDGGEVEHCGNGARCFVKFVRD-HGLTGKASVRV 100
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_BURP6 (Diaminopimelate epimerase OS=Burkholderia pseudomallei (strain 668) GN=dapF PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 6.770e-19 Identity = 47/99 (47.47%), Postives = 59/99 (59.60%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFA-MPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTV 619 L F K HG GNDF+++D P +T Q L DR+FGIGAD ++ P V+G D+ RIFN DG E E CGNG RCF +F+ + L GK S V Sbjct: 3 LSFTKMHGAGNDFVVLDGYTRALPPLTGAQVRALADRHFGIGADQLLLVEKPTVDGADFKYRIFNCDGGEVEHCGNGARCFVKFVRD-HGLTGKASVRV 100
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_BURP0 (Diaminopimelate epimerase OS=Burkholderia pseudomallei (strain 1106a) GN=dapF PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 6.770e-19 Identity = 47/99 (47.47%), Postives = 59/99 (59.60%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFA-MPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTV 619 L F K HG GNDF+++D P +T Q L DR+FGIGAD ++ P V+G D+ RIFN DG E E CGNG RCF +F+ + L GK S V Sbjct: 3 LSFTKMHGAGNDFVVLDGYTRALPPLTGAQVRALADRHFGIGADQLLLVEKPTVDGADFKYRIFNCDGGEVEHCGNGARCFVKFVRD-HGLTGKASVRV 100
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_BURMS (Diaminopimelate epimerase OS=Burkholderia mallei (strain SAVP1) GN=dapF PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 6.770e-19 Identity = 47/99 (47.47%), Postives = 59/99 (59.60%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFA-MPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTV 619 L F K HG GNDF+++D P +T Q L DR+FGIGAD ++ P V+G D+ RIFN DG E E CGNG RCF +F+ + L GK S V Sbjct: 3 LSFTKMHGAGNDFVVLDGYTRALPPLTGAQVRALADRHFGIGADQLLLVEKPTVDGADFKYRIFNCDGGEVEHCGNGARCFVKFVRD-HGLTGKASVRV 100
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_BURMA (Diaminopimelate epimerase OS=Burkholderia mallei GN=dapF PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 6.770e-19 Identity = 47/99 (47.47%), Postives = 59/99 (59.60%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFA-MPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTV 619 L F K HG GNDF+++D P +T Q L DR+FGIGAD ++ P V+G D+ RIFN DG E E CGNG RCF +F+ + L GK S V Sbjct: 3 LSFTKMHGAGNDFVVLDGYTRALPPLTGAQVRALADRHFGIGADQLLLVEKPTVDGADFKYRIFNCDGGEVEHCGNGARCFVKFVRD-HGLTGKASVRV 100
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_BURM9 (Diaminopimelate epimerase OS=Burkholderia mallei (strain NCTC 10229) GN=dapF PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 6.770e-19 Identity = 47/99 (47.47%), Postives = 59/99 (59.60%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFA-MPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTV 619 L F K HG GNDF+++D P +T Q L DR+FGIGAD ++ P V+G D+ RIFN DG E E CGNG RCF +F+ + L GK S V Sbjct: 3 LSFTKMHGAGNDFVVLDGYTRALPPLTGAQVRALADRHFGIGADQLLLVEKPTVDGADFKYRIFNCDGGEVEHCGNGARCFVKFVRD-HGLTGKASVRV 100
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_BURM7 (Diaminopimelate epimerase OS=Burkholderia mallei (strain NCTC 10247) GN=dapF PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 6.770e-19 Identity = 47/99 (47.47%), Postives = 59/99 (59.60%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFA-MPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTV 619 L F K HG GNDF+++D P +T Q L DR+FGIGAD ++ P V+G D+ RIFN DG E E CGNG RCF +F+ + L GK S V Sbjct: 3 LSFTKMHGAGNDFVVLDGYTRALPPLTGAQVRALADRHFGIGADQLLLVEKPTVDGADFKYRIFNCDGGEVEHCGNGARCFVKFVRD-HGLTGKASVRV 100
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_SACD2 (Diaminopimelate epimerase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=dapF PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 8.841e-19 Identity = 50/101 (49.50%), Postives = 61/101 (60.40%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFA-MPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHT 625 L F K HGLGNDF+++D S ITPE+A +L DR+FG+G D V+ P D+ RIFN DGSE E CGNG RCFA F+ + L K TV T Sbjct: 3 LRFTKMHGLGNDFVMID-AISQRVTITPERARQLADRHFGVGCDQVLVVETPDSPDADFKYRIFNHDGSEVENCGNGARCFAVFVRQ-RGLTAKSVITVET 101 The following BLAST results are available for this feature:
BLAST of FC876448 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 318
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876448 ID=FC876448; Name=FC876448; organism=Citrus clementina; type=EST; length=625bpback to top |