FC876448
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_LARHH (Diaminopimelate epimerase OS=Laribacter hongkongensis (strain HLHK9) GN=dapF PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 4.388e-18 Identity = 49/101 (48.51%), Postives = 61/101 (60.40%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMPGVN-GTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHT 625 L F K GLGNDF ++D T R+TPEQ KL DR FGIG D ++ P + G D++ RIFN DG E E CGNG RCFARF+ + L ++ V T Sbjct: 3 LKFTKMQGLGNDFAVLDGVRQTI-RLTPEQIRKLGDRRFGIGFDQLLLVEPPQDAGNDFSYRIFNCDGGEVEQCGNGARCFARFVFD-HGLTDRREIRVET 101
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_DESAP (Diaminopimelate epimerase OS=Desulforudis audaxviator (strain MP104C) GN=dapF PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 5.731e-18 Identity = 44/100 (44.00%), Postives = 58/100 (58.00%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHT 625 + F K HGLGNDF++V+ + P A ++CDR G+GADG++ +P D MR+FN DGSEPEMCGN +RC A + A L K V T Sbjct: 1 MEFTKMHGLGNDFVIVNGFGQSLPDDPGALARRVCDRRLGVGADGLVLLLPSA-AADLRMRVFNPDGSEPEMCGNAIRCVALY-ARRRGLVAKTQLEVET 98
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_SHESW (Diaminopimelate epimerase OS=Shewanella sp. (strain W3-18-1) GN=dapF PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 7.485e-18 Identity = 48/101 (47.52%), Postives = 60/101 (59.41%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMPGVN-GTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHT 625 + F K HGLGNDF++VD +PEQ +L DRNFGIG D ++ P + D+ RIFN+DGSE E CGNG RCFARF+ + L K V T Sbjct: 2 IQFTKMHGLGNDFMVVDGVTQNV-FFSPEQIRRLADRNFGIGFDQLLLVEPPYDPDLDFHYRIFNADGSEVEQCGNGARCFARFVRN-KGLTNKNKIRVST 100
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_SHEPC (Diaminopimelate epimerase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=dapF PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 7.485e-18 Identity = 48/101 (47.52%), Postives = 60/101 (59.41%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMPGVN-GTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHT 625 + F K HGLGNDF++VD +PEQ +L DRNFGIG D ++ P + D+ RIFN+DGSE E CGNG RCFARF+ + L K V T Sbjct: 2 IQFTKMHGLGNDFMVVDGVTQNV-FFSPEQIRRLADRNFGIGFDQLLLVEPPYDPDLDFHYRIFNADGSEVEQCGNGARCFARFVRN-KGLTNKNKIRVST 100
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_SHEDO (Diaminopimelate epimerase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=dapF PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 7.485e-18 Identity = 47/101 (46.53%), Postives = 61/101 (60.40%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMPGVN-GTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHT 625 +HF K HGLGNDF++VD +PEQ +L +RNFG+G D ++ P + D+ RIFN+DGSE E CGNG RCFARF+ + L K V T Sbjct: 2 IHFTKMHGLGNDFMVVDGVTQNV-FFSPEQIRRLANRNFGVGFDQLLLVEPPYDPDLDFHYRIFNADGSEVEQCGNGARCFARFVRN-KGLTQKNKIRVST 100
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_ACIBY (Diaminopimelate epimerase OS=Acinetobacter baumannii (strain AYE) GN=dapF PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 7.485e-18 Identity = 49/101 (48.51%), Postives = 63/101 (62.38%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMP-GVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHT 625 L F K HGLGNDF++VD S + ++L DR+FG+G D ++ P V D+ RIFN+DGSE E CGNGVRCFARF+ E +L K + TV T Sbjct: 3 LEFTKMHGLGNDFMVVD-LISQRAYLDTATIQRLADRHFGVGFDQLLIVEPPDVPEADFKYRIFNADGSEVEQCGNGVRCFARFVHE-RHLTNKTNITVQT 101
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_ACIBT (Diaminopimelate epimerase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=dapF PE=3 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 7.485e-18 Identity = 49/101 (48.51%), Postives = 63/101 (62.38%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMP-GVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHT 625 L F K HGLGNDF++VD S + ++L DR+FG+G D ++ P V D+ RIFN+DGSE E CGNGVRCFARF+ E +L K + TV T Sbjct: 3 LEFTKMHGLGNDFMVVD-LISQRAYLDTATIQRLADRHFGVGFDQLLIVEPPDVPEADFKYRIFNADGSEVEQCGNGVRCFARFVHE-RHLTNKTNITVQT 101
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_ACIBS (Diaminopimelate epimerase OS=Acinetobacter baumannii (strain SDF) GN=dapF PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 7.485e-18 Identity = 49/101 (48.51%), Postives = 63/101 (62.38%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMP-GVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHT 625 L F K HGLGNDF++VD S + ++L DR+FG+G D ++ P V D+ RIFN+DGSE E CGNGVRCFARF+ E +L K + TV T Sbjct: 3 LEFTKMHGLGNDFMVVD-LISQRAYLDTATIQRLADRHFGVGFDQLLIVEPPDVPEADFKYRIFNADGSEVEQCGNGVRCFARFVHE-RHLTNKTNITVQT 101
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_ACIBC (Diaminopimelate epimerase OS=Acinetobacter baumannii (strain ACICU) GN=dapF PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 7.485e-18 Identity = 49/101 (48.51%), Postives = 63/101 (62.38%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMP-GVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHT 625 L F K HGLGNDF++VD S + ++L DR+FG+G D ++ P V D+ RIFN+DGSE E CGNGVRCFARF+ E +L K + TV T Sbjct: 3 LEFTKMHGLGNDFMVVD-LISQRAYLDTATIQRLADRHFGVGFDQLLIVEPPDVPEADFKYRIFNADGSEVEQCGNGVRCFARFVHE-RHLTNKTNITVQT 101
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_ACIB5 (Diaminopimelate epimerase OS=Acinetobacter baumannii (strain AB0057) GN=dapF PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 7.485e-18 Identity = 49/101 (48.51%), Postives = 63/101 (62.38%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMP-GVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHT 625 L F K HGLGNDF++VD S + ++L DR+FG+G D ++ P V D+ RIFN+DGSE E CGNGVRCFARF+ E +L K + TV T Sbjct: 3 LEFTKMHGLGNDFMVVD-LISQRAYLDTATIQRLADRHFGVGFDQLLIVEPPDVPEADFKYRIFNADGSEVEQCGNGVRCFARFVHE-RHLTNKTNITVQT 101 The following BLAST results are available for this feature:
BLAST of FC876448 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 318
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876448 ID=FC876448; Name=FC876448; organism=Citrus clementina; type=EST; length=625bpback to top |