FC876452

Overview
NameFC876452
Unique NameFC876452
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length624
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10302 contig Ccv1_Contig10302:3..626. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876452 vs. ExPASy Swiss-Prot
Match: C71BN_ARATH (Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=CYP71B23 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 4.378e-26
Identity = 59/157 (37.58%), Postives = 91/157 (57.96%), Query Frame = 1
Query:  160 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTE--PVNLAQRLNLCVVNALGRVMLG 624
            PPGP   PI+GNL +L  +PH+ +  L + HGP+M L+LG+             + LK HD +  +RP    +K I+YN++DI F PYG  WR LRK++ + LFS K  + +R++R+EE  +L + L+ A  +  PVNL + L     + + R+  G
Sbjct:   32 PPGPPKLPIIGNLHYLNGLPHKCLLNLWKIHGPVMQLQLGYVPLVVISSNQAAEEVLKTHDLDCCSRPETIASKTISYNFKDIGFAPYGEEWRALRKLAVIELFSLKKFNSFRYIREEENDLLVKKLSEASEKQSPVNLKKALFTLSASIVCRLAFG 188          
BLAST of FC876452 vs. ExPASy Swiss-Prot
Match: C71BY_ARATH (Cytochrome P450 71B37 OS=Arabidopsis thaliana GN=CYP71B37 PE=2 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 1.192e-23
Identity = 56/157 (35.67%), Postives = 88/157 (56.05%), Query Frame = 1
Query:  160 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTE--PVNLAQRLNLCVVNALGRVMLG 624
            PP P  +PI+GNL  LG +PHQS+  L++ +GP+M L+ G              Q LKIHD N  +RP  +G + ++YNY DIVF P+   W+ LR++    LFS K +   + +R+EE+  L  + + +  +  PVNL+++L    V  + +   G
Sbjct:   32 PPSPPGFPIIGNLHQLGELPHQSLWSLSKKYGPVMLLKFGSIPTVVVSSSETAKQALKIHDLNCCSRPSLAGPRALSYNYLDIVFSPFNDYWKELRRMCVQELFSPKQVHLIQPIREEEVKKLMNSFSESAAQKTPVNLSEKLASLTVGVICKAAFG 188          
BLAST of FC876452 vs. ExPASy Swiss-Prot
Match: C71B1_THLAR (Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.192e-23
Identity = 55/143 (38.46%), Postives = 83/143 (58.04%), Query Frame = 1
Query:  160 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTR--ALASAGTEPVNLAQRL 582
            PPGP   PI+GNL  LG  PH+++  L++T+GPLM L+LG                LK +D    +RP  +    I YN +D+VF PY   WR +RK++ V L++ K +  +RH+R+EE+A   R    A++  E VNL+Q++
Sbjct:   30 PPGPPRLPIIGNLHQLGEKPHRAMVELSKTYGPLMSLKLGSVTTVVATSVETVRDVLKTYDLECCSRPYMTYPARITYNLKDLVFSPYDKYWRQVRKLTVVELYTAKRVQSFRHIREEEVASFVRFNKQAASSEETVNLSQKI 172          
BLAST of FC876452 vs. ExPASy Swiss-Prot
Match: C71A1_PERAE (Cytochrome P450 71A1 OS=Persea americana GN=CYP71A1 PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.192e-23
Identity = 58/157 (36.94%), Postives = 86/157 (54.78%), Query Frame = 1
Query:  160 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGT--EPVNLAQRLNLCVVNALGRVMLG 624
            PP P   PI+GNL  LG +PH+S+  LA   GPL+ L LG              + LK HD  F++RP  + A+ I Y+  D+ F PYG  WR +RKI  + L S K ++ YR +R+EE+ ++   ++ + +  E VNL++ L L     + RV  G
Sbjct:   32 PPSPPNLPIIGNLHQLGNLPHRSLRSLANELGPLILLHLGHIPTLIVSTAEIAEEILKTHDLIFASRPSTTAARRIFYDCTDVAFSPYGEYWRQVRKICVLELLSIKRVNSYRSIREEEVGLMMERISQSCSTGEAVNLSELLLLLSSGTITRVAFG 188          
BLAST of FC876452 vs. ExPASy Swiss-Prot
Match: C71B9_ARATH (Cytochrome P450 71B9 OS=Arabidopsis thaliana GN=CYP71B9 PE=2 SV=3)

HSP 1 Score: 108.612 bits (270), Expect = 2.656e-23
Identity = 54/142 (38.03%), Postives = 85/142 (59.86%), Query Frame = 1
Query:  160 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTE--PVNLAQR 579
            PP P  +PI+GNL  LG +PHQS+  L++T+GP+M L+LG              Q LKI+D +  +RP  +GAK ++YNY DI F P+   W+ LR+I    LFS K +   + +++EE+  L  +   + ++  PVNL+++
Sbjct:   32 PPSPPGFPIIGNLHQLGELPHQSLWSLSKTYGPVMLLKLGSVPTVVVSSSETAKQVLKINDLHCCSRPSLAGAKELSYNYLDIAFSPFDDYWKELRRICVQELFSAKRVHSIQPIKEEEVRKLIVSATESASQKSPVNLSEK 173          
BLAST of FC876452 vs. ExPASy Swiss-Prot
Match: C71AP_ARATH (Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=CYP71A25 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.656e-23
Identity = 52/155 (33.55%), Postives = 84/155 (54.19%), Query Frame = 1
Query:  160 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVNLAQRLNLCVVNALGRVMLG 624
            PP P   P++GNL  LG   H+S+  L+R +GPLM L LG              + LK HD  F+NRP +  ++ + YN +D+   PYG  WR ++ +  +HL S K +  +R VR+EE+ ++   +  + + P N+++ L     + + RV LG
Sbjct:   31 PPSPPGLPLIGNLHQLGRHTHRSLCDLSRRYGPLMLLHLGRVPVLIVSSADMAQEILKTHDQAFANRPRSKLSQKLLYNNRDVASAPYGEYWRQMKSVCVIHLLSNKMVRSFRDVREEEITLMMAKIRKSSSLPFNVSKVLECLTNDVICRVALG 185          
BLAST of FC876452 vs. ExPASy Swiss-Prot
Match: C71BV_ARATH (Cytochrome P450 71B34 OS=Arabidopsis thaliana GN=CYP71B34 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.009e-22
Identity = 55/153 (35.95%), Postives = 87/153 (56.86%), Query Frame = 1
Query:  160 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTE--PVNLAQRLNLCVVNALGR 612
            PP P   PI+GNL  LG +PHQS+  L++ +GP+M L+LG              Q LKIHD +  +RP  +GA+ ++YNY DI F PY   W+ +RK++   LFS K +   + ++ EE+  L  +++ +  +  P+NL + L    V+ + R
Sbjct:   32 PPSPPGCPIIGNLHQLGELPHQSLWKLSKKYGPVMLLKLGRVPTVIVSSSETAKQALKIHDLHCCSRPGFAGARELSYNYLDIAFSPYDDYWKEVRKLAVQELFSSKQVHSIQPIKDEEVKKLIDSISESAAQKTPINLNKTLLALTVSVVCR 184          
BLAST of FC876452 vs. ExPASy Swiss-Prot
Match: C71AG_ARATH (Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=CYP71A16 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.722e-22
Identity = 55/157 (35.03%), Postives = 84/157 (53.50%), Query Frame = 1
Query:  160 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRAL--ASAGTEPVNLAQRLNLCVVNALGRVMLG 624
            PP P   P++GNL  L   PH++++ L+  HGPLM LR G                +K HD  F+NRP    A  I+   +D+VF PYG  WR ++ + ++HL S K +      R+EE+ +L   L  AS  +  VNL++ +   V + +G+V+LG
Sbjct:   33 PPSPWRLPVIGNLHQLSLHPHRALSSLSARHGPLMLLRFGRVPVLIVSSADVAHDVMKTHDLKFANRPITKSAHKISNGGRDLVFAPYGEYWRNVKSLCTIHLLSNKMVQSSEKRREEEITLLMETLEEASLSSSSVNLSKLITNMVSDIMGKVVLG 189          
BLAST of FC876452 vs. ExPASy Swiss-Prot
Match: C71BS_ARATH (Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=CYP71B28 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.248e-22
Identity = 56/157 (35.67%), Postives = 85/157 (54.14%), Query Frame = 1
Query:  160 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEP--VNLAQRLNLCVVNALGRVMLG 624
            PPGPK  PI+GNL     +  ++   L+  +GP+++LR GF             + LK HD    +RP   G + I+YN++DI F PYG  WR +RK+S V LFS K L  +R++R+EE  +  + L+   +    VNL + L   V + + R+  G
Sbjct:   29 PPGPKKLPIIGNLHQRRELHPRNSRNLSEKYGPIVFLRYGFVPVVVISSKEAAEEVLKTHDLECCSRPETVGTRAISYNFKDIGFAPYGEDWRTMRKLSVVELFSSKKLQSFRYIREEENDLCVKKLSDLASRRSLVNLEKTLFTLVGSIVCRIGFG 185          
BLAST of FC876452 vs. ExPASy Swiss-Prot
Match: C71BK_ARATH (Cytochrome P450 71B20 OS=Arabidopsis thaliana GN=CYP71B20 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.936e-22
Identity = 52/157 (33.12%), Postives = 84/157 (53.50%), Query Frame = 1
Query:  160 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGT--EPVNLAQRLNLCVVNALGRVMLG 624
            PP P  +P++GNL  +G +PH+S+  LA  +GP+M L  GF             + L+ HD +  +RP   G + ++ N++D+ F PYG  W+  RK +   LF  K +  +RH+R+EE   L + L+ +     PV+L++ L     +   RV LG
Sbjct:   31 PPSPPKFPVIGNLHQIGELPHRSLQHLAERYGPVMLLHFGFVPVTVVSSREAAEEVLRTHDLDCCSRPKLVGTRLLSRNFKDVCFTPYGNEWKARRKFALRELFCLKKVQSFRHIREEECNFLVKQLSESAVNRSPVDLSKSLFWLTASIFFRVALG 187          
The following BLAST results are available for this feature:
BLAST of FC876452 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 119
Match NameE-valueIdentityDescription
C71BN_ARATH4.378e-2637.58Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=C... [more]
C71BY_ARATH1.192e-2335.67Cytochrome P450 71B37 OS=Arabidopsis thaliana GN=C... [more]
C71B1_THLAR1.192e-2338.46Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1... [more]
C71A1_PERAE1.192e-2336.94Cytochrome P450 71A1 OS=Persea americana GN=CYP71A... [more]
C71B9_ARATH2.656e-2338.03Cytochrome P450 71B9 OS=Arabidopsis thaliana GN=CY... [more]
C71AP_ARATH2.656e-2333.55Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=C... [more]
C71BV_ARATH1.009e-2235.95Cytochrome P450 71B34 OS=Arabidopsis thaliana GN=C... [more]
C71AG_ARATH1.722e-2235.03Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=C... [more]
C71BS_ARATH2.248e-2235.67Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=C... [more]
C71BK_ARATH2.936e-2233.12Cytochrome P450 71B20 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionC32004H11EF DevOvary1 Citrus clementina cDNA clone C32004H11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876452 ID=FC876452; Name=FC876452; organism=Citrus clementina; type=EST; length=624bp
GGACTACTCGTACCATTTCTACGCTTTCTCTGGGAAACGAAACAAAGAGC
AATGTCTACTTTACCACTACTGATACTGTACACATCACTTTTGGCAATTG
TCATTTCTTTCCTTTTTAGCCTCCTCCGGAACAGACGCAGACACTCCTCC
CACCGTCTGCCTCCCGGTCCGAAACCCTGGCCAATAGTCGGAAACCTCCC
TCACTTGGGCCCTATGCCCCACCAATCCATAGCGGGTCTGGCCCGAACCC
ACGGCCCCCTCATGTACCTCCGGTTAGGCTTCGTTGACGTCGTCGTGGCC
GCTTCCGCTTCCGTGGCGGCCCAATTCCTGAAGATCCATGATTCCAACTT
CTCCAACCGCCCTCCCAACTCCGGCGCCAAGCACATCGCTTACAACTATC
AGGACATCGTTTTCCGGCCGTACGGCCCCCGCTGGCGGATGCTGAGGAAG
ATCAGCTCCGTTCATCTTTTCTCCGGCAAGGCCTTGGATGACTACAGGCA
CGTTCGCCAGGAAGAGATGGCGGTGCTCACGCGCGCGTTGGCGAGTGCAG
GAACGGAGCCGGTGAACTTAGCTCAACGGTTGAACTTGTGCGTTGTGAAT
GCCCTAGGGCGGGTGATGCTAGGC
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