FC876452

Overview
NameFC876452
Unique NameFC876452
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length624
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876452 vs. ExPASy Swiss-Prot
Match: C7D94_MENGR (Cytochrome P450 71D94 OS=Mentha gracilis GN=CYP71D94 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.492e-13
Identity = 41/141 (29.08%), Postives = 73/141 (51.77%), Query Frame = 1
Query:  169 PKPWPIVGNLPHL--GPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVNLAQRLN 585
            P   P++G+L  L  G  P   +  +AR +GP+ +++LG              Q +K+ D NF++R  + G++ + Y+  DI+F PY   W  +RKI    L S K +  +  +RQEE+  L R +  +   PV++ + ++
Sbjct:   35 PPKLPVIGHLHLLWGGLPPQHLLRSIAREYGPVAHVQLGEVYSVVLSSAEAAKQAMKVLDPNFADRFDSVGSRIMWYDNDDIIFSPYNDHWHQMRKICVSELLSPKNVRSFGFIRQEEIERLIRVMKQSEGAPVDVTEEVS 175          
BLAST of FC876452 vs. ExPASy Swiss-Prot
Match: C71C2_MAIZE (Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.492e-13
Identity = 52/161 (32.30%), Postives = 78/161 (48.45%), Query Frame = 1
Query:  160 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGP--LMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGT----EPVNLAQRLNLCVVNALGRVMLG 624
            PPG  P  I+G+L  +G   H SI  L   HG   L+ LR+G                L+  D  F++RPP   A+ I Y   D+ F PYG   R  RK+ + H+ S K +  +RH RQEE+ ++   + +A T      V+L+  L+    + + R +LG
Sbjct:   62 PPGKLP--IIGHLHLIGAETHISIRDLDAKHGRNGLLLLRIGAVPTLFVSSPSAADAVLRTQDHIFASRPPWMAAEIIRYGPSDVAFVPYGEYGRQGRKLLTTHMLSTKKVQSFRHGRQEEVRLVMDKIRAAATAAPPAAVDLSDLLSGYTNDVVSRAVLG 220          
BLAST of FC876452 vs. ExPASy Swiss-Prot
Match: TCMO_HELTU (Trans-cinnamate 4-monooxygenase OS=Helianthus tuberosus GN=CYP73A1 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.254e-13
Identity = 47/157 (29.94%), Postives = 75/157 (47.77%), Query Frame = 1
Query:  160 PPGPKPWPIVGNLPHLGP-MPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVL---TRALASAGTEPVNLAQRLNLCVVNALGRVM 618
            PPGP P PI GN   +G  + H+++  LA+  G ++ LR+G              + L      F +R  N          QD+VF  YG  WR +R+I +V  F+ K +  YR+  + E A +    +   +A TE + + +RL L + N + R+M
Sbjct:   34 PPGPIPVPIFGNWLQVGDDLNHRNLTDLAKRFGEILLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRYGWEAEAAAVVDDVKKNPAAATEGIVIRRRLQLMMYNNMFRIM 190          
BLAST of FC876452 vs. ExPASy Swiss-Prot
Match: TCMO_POPKI (Trans-cinnamate 4-monooxygenase OS=Populus kitakamiensis GN=CYP73A16 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.250e-13
Identity = 47/157 (29.94%), Postives = 73/157 (46.50%), Query Frame = 1
Query:  160 PPGPKPWPIVGNLPHLGP-MPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRAL---ASAGTEPVNLAQRLNLCVVNALGRVM 618
            PPGP P P+ GN   +G  + H+++  LA+  G +  LR+G              + L      F +R  N          QD+VF  YG  WR +R+I +V  F+ K +  YR+  +EE A +   +     A T  + L +RL L + N + R+M
Sbjct:   34 PPGPLPVPVFGNWLQVGDDLNHRNLTDLAKKFGDIFLLRMGQRNLVVVSSPDLSKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRYGWEEEAAQVVEDVKKNPEAATNGIVLRRRLQLMMYNNMYRIM 190          
BLAST of FC876452 vs. ExPASy Swiss-Prot
Match: C81E1_GLYEC (Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata GN=CYP81E1 PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 5.551e-13
Identity = 47/158 (29.75%), Postives = 73/158 (46.20%), Query Frame = 1
Query:  160 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALA---SAGTEPVNLAQRLNLCVVNALGRVMLG 624
            PPGP   PI+GNL HL    H++  GL+  +G +  L  G              Q    +D   +NRP     K+I YNY  +    YG  WR LR+I+++ + S   ++ +  +R++E   L   LA   S     + L+ RL     N + R++ G
Sbjct:   33 PPGPPSLPIIGNLHHLKRPLHRTFKGLSEKYGHVFSLWFGSRLVVVVSSASEFQQCFTKNDVVLANRPRFLSGKYIFYNYTTLGSTSYGEHWRNLRRITALDVLSNHRINSFSGIRRDETQRLITRLADDSSTNFAEMELSSRLYDMTFNNIMRMISG 190          
BLAST of FC876452 vs. ExPASy Swiss-Prot
Match: C76A2_SOLME (Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76A2 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.551e-13
Identity = 39/119 (32.77%), Postives = 63/119 (52.94%), Query Frame = 1
Query:  160 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRP-PNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQE 513
            PPGP   PI GN+  LG  P++ +A L + +GP+++L+LG              +  K HD +F+NR  P+    H +Y    +   PYGP WR  R+I ++ +F  K + +   VR++
Sbjct:   36 PPGPPGLPIFGNMFELGTEPYKKMAVLRQKYGPVLWLKLGSTYTMVVQTAQASEELFKNHDISFANRVIPDVNQAH-SYYQGSLAIAPYGPFWRFQRRICTIEMFVHKKISETEPVRRK 153          
BLAST of FC876452 vs. ExPASy Swiss-Prot
Match: C71A8_MENPI (Cytochrome P450 71A8 OS=Mentha piperita GN=CYP71A8 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.551e-13
Identity = 48/155 (30.97%), Postives = 72/155 (46.45%), Query Frame = 1
Query:  160 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVNLAQRLNLCVVNALGRVMLG 624
            PP P+  PI+GNL  LG +PH ++  +AR HGP+M L LG                   H+++ S      G++  A   Q  V   YG  WR L+ I  V L S K +  +R VR+EE  +L + +  +    VNL+        + + R  +G
Sbjct:   50 PPSPRKLPILGNLLQLGSLPHHNLRSMARKHGPIMLLHLGSVRPVSSRRRPRGN-----HENSRSRLRRPRGSRSAALQLQGRV-GGYGEYWRQLKTICVVQLLSNKRVQSFRSVREEETELLMKKIGDSSGN-VNLSHMFTQLTNDVVCRSAIG 197          
BLAST of FC876452 vs. ExPASy Swiss-Prot
Match: TCMO_ZINEL (Trans-cinnamate 4-monooxygenase OS=Zinnia elegans GN=CYP73A12 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.237e-12
Identity = 48/157 (30.57%), Postives = 72/157 (45.86%), Query Frame = 1
Query:  160 PPGPKPWPIVGNLPHLGP-MPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVL---TRALASAGTEPVNLAQRLNLCVVNALGRVM 618
            PPGP P PI GN   +G  + H+++  LA+  G +  LR+G              + L      F +R  N          QD+VF  YG  WR +R+I +V  F+ K +  YR   + E A +    +    A TE V + +RL L + N + R+M
Sbjct:   34 PPGPVPVPIFGNWLQVGDDLNHRNLTDLAKKFGEIFLLRMGQRNLVVVSSPNLAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRTGWEAEAAAVVDDVKKNPKAATEGVVIRKRLQLMMYNNMFRIM 190          
BLAST of FC876452 vs. ExPASy Swiss-Prot
Match: C81F1_ARATH (Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CYP81F1 PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.237e-12
Identity = 42/127 (33.07%), Postives = 66/127 (51.97%), Query Frame = 1
Query:  160 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQ-FLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEE-MAVLTR 534
            PPGP   P VG+L  + P  H+ +   +  +GP+  LR G              + F   +D   S+RP    AK++AYN+  +   PYG  WR LR+I S  + S   L +++H+R++E + +LTR
Sbjct:   29 PPGPPSRPFVGHLHLMKPPIHRLLQRYSNQYGPIFSLRFGSRRVVVITSPSLAQESFTGQNDIVLSSRPLQLTAKYVAYNHTTVGTAPYGDHWRNLRRICSQEILSSHRLINFQHIRKDEILRMLTR 155          
BLAST of FC876452 vs. ExPASy Swiss-Prot
Match: C71C1_MAIZE (Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.237e-12
Identity = 43/132 (32.58%), Postives = 62/132 (46.97%), Query Frame = 1
Query:  160 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGP--LMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASA 549
            P  P   PI+G+L  +G  PH S   L   +G   LM +++G                L+ HD   ++RP N  A  I YN  D+ F PYG  WR  RK+ + HL S K +   R  R+EE+ ++   +  A
Sbjct:   57 PTPPGKLPIIGHLHLIGSHPHVSFRDLHAKYGHNGLMLVQVGAVPTIVVSTPQAAEAVLRTHDHVLASRPRNPVADIIRYNSTDVAFAPYGVYWRTARKVVNTHLLSAKMVFSKRREREEEVRLVVARIRDA 188          
The following BLAST results are available for this feature:
BLAST of FC876452 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 119
Match NameE-valueIdentityDescription
C7D94_MENGR2.492e-1329.08Cytochrome P450 71D94 OS=Mentha gracilis GN=CYP71D... [more]
C71C2_MAIZE2.492e-1332.30Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 S... [more]
TCMO_HELTU3.254e-1329.94Trans-cinnamate 4-monooxygenase OS=Helianthus tube... [more]
TCMO_POPKI4.250e-1329.94Trans-cinnamate 4-monooxygenase OS=Populus kitakam... [more]
C81E1_GLYEC5.551e-1329.75Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata ... [more]
C76A2_SOLME5.551e-1332.77Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76... [more]
C71A8_MENPI5.551e-1330.97Cytochrome P450 71A8 OS=Mentha piperita GN=CYP71A8... [more]
TCMO_ZINEL1.237e-1230.57Trans-cinnamate 4-monooxygenase OS=Zinnia elegans ... [more]
C81F1_ARATH1.237e-1233.07Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CY... [more]
C71C1_MAIZE1.237e-1232.58Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionC32004H11EF DevOvary1 Citrus clementina cDNA clone C32004H11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876452 ID=FC876452; Name=FC876452; organism=Citrus clementina; type=EST; length=624bp
GGACTACTCGTACCATTTCTACGCTTTCTCTGGGAAACGAAACAAAGAGC
AATGTCTACTTTACCACTACTGATACTGTACACATCACTTTTGGCAATTG
TCATTTCTTTCCTTTTTAGCCTCCTCCGGAACAGACGCAGACACTCCTCC
CACCGTCTGCCTCCCGGTCCGAAACCCTGGCCAATAGTCGGAAACCTCCC
TCACTTGGGCCCTATGCCCCACCAATCCATAGCGGGTCTGGCCCGAACCC
ACGGCCCCCTCATGTACCTCCGGTTAGGCTTCGTTGACGTCGTCGTGGCC
GCTTCCGCTTCCGTGGCGGCCCAATTCCTGAAGATCCATGATTCCAACTT
CTCCAACCGCCCTCCCAACTCCGGCGCCAAGCACATCGCTTACAACTATC
AGGACATCGTTTTCCGGCCGTACGGCCCCCGCTGGCGGATGCTGAGGAAG
ATCAGCTCCGTTCATCTTTTCTCCGGCAAGGCCTTGGATGACTACAGGCA
CGTTCGCCAGGAAGAGATGGCGGTGCTCACGCGCGCGTTGGCGAGTGCAG
GAACGGAGCCGGTGAACTTAGCTCAACGGTTGAACTTGTGCGTTGTGAAT
GCCCTAGGGCGGGTGATGCTAGGC
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