FC876452

Overview
NameFC876452
Unique NameFC876452
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length624
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10302 contig Ccv1_Contig10302:3..626. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876452 vs. ExPASy Swiss-Prot
Match: C71AD_ARATH (Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=CYP71A13 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.360e-18
Identity = 48/157 (30.57%), Postives = 78/157 (49.68%), Query Frame = 1
Query:  160 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRAL--ASAGTEPVNLAQRLNLCVVNALGRVMLG 624
            PP P   P++GNL  L   PH+S+  L+  +GPLM L  G              + LK HD  F+NRP +     +    +D+VF PYG  WR ++ +  ++L + K ++ +  VR++E+  +   L  AS+ +   NL++       +   RV LG
Sbjct:   34 PPSPWRLPVIGNLHQLSLHPHRSLRSLSLRYGPLMLLHFGRVPILVVSSGEAAQEVLKTHDHKFANRPRSKAVHGLMNGGRDVVFAPYGEYWRQMKSVCILNLLTNKMVESFEKVREDEVNAMIEKLEKASSSSSSENLSELFITLPSDVTSRVALG 190          
BLAST of FC876452 vs. ExPASy Swiss-Prot
Match: C93A2_SOYBN (Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 5.731e-18
Identity = 47/131 (35.88%), Postives = 68/131 (51.91%), Query Frame = 1
Query:  160 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAG 552
            PP PK  PI+G+L  + P+PHQ    L+  HGP+M L LG              +FLK H+ NFSNRP     +++A  +   VF PYGP  + ++K+    L  G+ LD +  VRQ+E     + +   G
Sbjct:   30 PPSPKGLPIIGHLHLVSPIPHQDFYKLSLRHGPIMQLFLGSVPCVVASTAEAAKEFLKTHEINFSNRP----GQNVAVQFLTYVFGPYGPSVKFIKKLCMSELLGGRMLDQFLPVRQQETKKFIKRVLQKG 156          
BLAST of FC876452 vs. ExPASy Swiss-Prot
Match: C71AI_ARATH (Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=CYP71A18 PE=2 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 5.731e-18
Identity = 49/157 (31.21%), Postives = 76/157 (48.41%), Query Frame = 1
Query:  160 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRAL--ASAGTEPVNLAQRLNLCVVNALGRVMLG 624
            PP P   P++GNL  L   PH+S+  L+  +GPLM L  G              + LK HD  F+NRP +     +    +D+VF PYG  WR ++ +  ++L + K +  +  VR+EE+  +   L  AS  +   NL++       +   RV LG
Sbjct:   34 PPSPWRIPVIGNLHQLSLHPHRSLHSLSLRYGPLMLLHFGRVPILVVSSSEAAHEILKTHDLKFANRPKSKAVHGLMNGGRDVVFGPYGEYWRQMKSVCILNLLTNKMVASFEKVREEEVNAMMEKLEKASCSSSAENLSELFVTLTSDVTSRVSLG 190          
BLAST of FC876452 vs. ExPASy Swiss-Prot
Match: C71AE_ARATH (Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=CYP71A14 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 5.731e-18
Identity = 49/157 (31.21%), Postives = 79/157 (50.32%), Query Frame = 1
Query:  160 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRAL--ASAGTEPVNLAQRLNLCVVNALGRVMLG 624
            PP P   P++GNL  L   PH+S+  L+  +GPLM L  G                +K HD   +NRP     + I    +++VF PYG  WR ++ +  V+L + K +  +  VR+EE++ +   +  AS+ + P+NL++ L     +   RV LG
Sbjct:   34 PPSPWRVPVIGNLHQLSLHPHRSLRSLSHRYGPLMLLHFGRVPVLVVSSSDVAHDLMKTHDLKVANRPQLKVVEKIFNGGREMVFSPYGEYWRQIKSVCIVNLLNKKKVQSFEKVREEEISEMMERVEKASSDSSPLNLSELLLTLTSDVTSRVSLG 190          
BLAST of FC876452 vs. ExPASy Swiss-Prot
Match: C83A1_ARATH (Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CYP83A1 PE=1 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 7.485e-18
Identity = 44/120 (36.67%), Postives = 68/120 (56.67%), Query Frame = 1
Query:  160 PPGPKPWPIVGNLPHLGPM-PHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEE 516
            PPGP P P++GNL  L  + P +  AG A+ +GP++  R+G              + LK  D NF++RPP+ G + I+Y  +D+    Y P +R +RK+   HLFS   +  ++HVR+EE
Sbjct:   31 PPGPSPLPVIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPHRGHEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEE 150          
BLAST of FC876452 vs. ExPASy Swiss-Prot
Match: C71DI_MENSP (Cytochrome P450 71D18 OS=Mentha spicata GN=CYP71D18 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 7.485e-18
Identity = 48/149 (32.21%), Postives = 81/149 (54.36%), Query Frame = 1
Query:  160 PPGPKPWPIVGNLPHL-GPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVNLAQRLN--LCVV 597
            PP P   P++G+L  L G +P      +A+ +GP+ +++LG              Q +K+ D NF++R    G++ + Y+  DI+F PY   WR +R+I    L S K +  + ++RQEE+  L R L S+G  PV++ + ++   CVV
Sbjct:   35 PPSPPKLPVIGHLHFLWGGLPQHVFRSIAQKYGPVAHVQLGEVYSVVLSSAEAAKQAMKVLDPNFADRFDGIGSRTMWYDKDDIIFSPYNDHWRQMRRICVTELLSPKNVRSFGYIRQEEIERLIRLLGSSGGAPVDVTEEVSKMSCVV 183          
BLAST of FC876452 vs. ExPASy Swiss-Prot
Match: C71DI_MENGR (Cytochrome P450 71D18 OS=Mentha gracilis GN=CYP71D18 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 7.485e-18
Identity = 48/149 (32.21%), Postives = 81/149 (54.36%), Query Frame = 1
Query:  160 PPGPKPWPIVGNLPHL-GPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVNLAQRLN--LCVV 597
            PP P   P++G+L  L G +P      +A+ +GP+ +++LG              Q +K+ D NF++R    G++ + Y+  DI+F PY   WR +R+I    L S K +  + ++RQEE+  L R L S+G  PV++ + ++   CVV
Sbjct:   35 PPSPPKLPVIGHLHFLWGGLPQHVFRSIAQKYGPVAHVQLGEVYSVVLSSAEAAKQAMKVLDPNFADRFDGIGSRTMWYDKDDIIFSPYNDHWRQMRRICVTELLSPKNVRSFGYIRQEEIERLIRLLGSSGGAPVDVTEEVSKMSCVV 183          
BLAST of FC876452 vs. ExPASy Swiss-Prot
Match: C71BG_ARATH (Cytochrome P450 71B16 OS=Arabidopsis thaliana GN=CYP71B16 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 9.775e-18
Identity = 50/157 (31.85%), Postives = 78/157 (49.68%), Query Frame = 1
Query:  160 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRAL--ASAGTEPVNLAQRLNLCVVNALGRVMLG 624
            PP P  +P++GNL  +G +PH+S   LA   G +M L  GF             + L+ HD     RP   G++ I+  ++DI F PYG  WR  RK     LF  K +  + ++ +EE  +L + L  ++ G  PV+L++ L     + L R+  G
Sbjct:   31 PPSPPTFPVIGNLHQVGELPHRSFQRLAERTGHVMLLHFGFVPVTVISSREAAEEVLRTHDLKCCTRPKLVGSRLISRGFKDISFTPYGEEWRERRKFLVRELFCFKKVQYFGYIVEEECNLLVKKLTESAVGRPPVDLSKSLFWLAASILFRIAFG 187          
BLAST of FC876452 vs. ExPASy Swiss-Prot
Match: C99A1_SORBI (Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bicolor GN=CYP99A1 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.277e-17
Identity = 57/156 (36.54%), Postives = 80/156 (51.28%), Query Frame = 1
Query:  160 PPGPKPWPIVGNLPHLGP-MPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEE-MAVLTRALASAGTEPVNLAQRLNLCVVNALGRVML 621
            PPGP   P++GNL HL    PH ++  LA  HGP+MYLRLG              + L+  D+ F++RP    A  I Y   D+ F PYG  WRMLRK+    L +   +     VR  E ++++ + + +AG       QR    VVN LGR++L
Sbjct:   28 PPGPWRLPLIGNLLHLATSQPHVALRDLAMKHGPVMYLRLGQVDAVVISSPAAAQEVLRDKDTTFASRPSLLVADIILYGSMDMSFAPYGGNWRMLRKLCMSELLNTHKVRQLAAVRDSETLSLVRKVVYAAGAGGGGRGQRGEAPVVN-LGRLVL 182          
BLAST of FC876452 vs. ExPASy Swiss-Prot
Match: C71AC_ARATH (Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=CYP71A12 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.667e-17
Identity = 47/157 (29.94%), Postives = 78/157 (49.68%), Query Frame = 1
Query:  160 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRAL--ASAGTEPVNLAQRLNLCVVNALGRVMLG 624
            PP P   P++GNL  L   PH+S+  L+  +GPLM L  G              + LK HD  F+NRP +     +    +D+VF PYG  WR ++ +  ++L + K +  +  +R+EE+  + + L  AS+ +   NL++       +   R+ LG
Sbjct:   34 PPSPWRLPLIGNLHQLSLHPHRSLHSLSLRYGPLMLLHFGRVPILVVSSGEAAQEVLKTHDLKFANRPRSKAVHGLMNGGRDVVFGPYGEYWRQMKSVCILNLLTNKMVASFEKIREEELNEMIKKLEKASSSSSSENLSELFVTLPSDVTSRIALG 190          
The following BLAST results are available for this feature:
BLAST of FC876452 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 119
Match NameE-valueIdentityDescription
C71AD_ARATH3.360e-1830.57Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=C... [more]
C93A2_SOYBN5.731e-1835.88Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=... [more]
C71AI_ARATH5.731e-1831.21Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=C... [more]
C71AE_ARATH5.731e-1831.21Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=C... [more]
C83A1_ARATH7.485e-1836.67Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CY... [more]
C71DI_MENSP7.485e-1832.21Cytochrome P450 71D18 OS=Mentha spicata GN=CYP71D1... [more]
C71DI_MENGR7.485e-1832.21Cytochrome P450 71D18 OS=Mentha gracilis GN=CYP71D... [more]
C71BG_ARATH9.775e-1831.85Cytochrome P450 71B16 OS=Arabidopsis thaliana GN=C... [more]
C99A1_SORBI1.277e-1736.54Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bico... [more]
C71AC_ARATH1.667e-1729.94Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionC32004H11EF DevOvary1 Citrus clementina cDNA clone C32004H11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876452 ID=FC876452; Name=FC876452; organism=Citrus clementina; type=EST; length=624bp
GGACTACTCGTACCATTTCTACGCTTTCTCTGGGAAACGAAACAAAGAGC
AATGTCTACTTTACCACTACTGATACTGTACACATCACTTTTGGCAATTG
TCATTTCTTTCCTTTTTAGCCTCCTCCGGAACAGACGCAGACACTCCTCC
CACCGTCTGCCTCCCGGTCCGAAACCCTGGCCAATAGTCGGAAACCTCCC
TCACTTGGGCCCTATGCCCCACCAATCCATAGCGGGTCTGGCCCGAACCC
ACGGCCCCCTCATGTACCTCCGGTTAGGCTTCGTTGACGTCGTCGTGGCC
GCTTCCGCTTCCGTGGCGGCCCAATTCCTGAAGATCCATGATTCCAACTT
CTCCAACCGCCCTCCCAACTCCGGCGCCAAGCACATCGCTTACAACTATC
AGGACATCGTTTTCCGGCCGTACGGCCCCCGCTGGCGGATGCTGAGGAAG
ATCAGCTCCGTTCATCTTTTCTCCGGCAAGGCCTTGGATGACTACAGGCA
CGTTCGCCAGGAAGAGATGGCGGTGCTCACGCGCGCGTTGGCGAGTGCAG
GAACGGAGCCGGTGAACTTAGCTCAACGGTTGAACTTGTGCGTTGTGAAT
GCCCTAGGGCGGGTGATGCTAGGC
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