FC876452

Overview
NameFC876452
Unique NameFC876452
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length624
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876452 vs. ExPASy Swiss-Prot
Match: C71D6_SOLCH (Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71D6 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.844e-17
Identity = 49/144 (34.03%), Postives = 77/144 (53.47%), Query Frame = 1
Query:  160 PPGPKPWPIVGNLPHL-GPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGT--EPVNLAQRL 582
            PPGP   P +G++ HL G  PH+ +  LA+ +GPLM+L+LG              + LK HD  F++RP       I Y+  DI F PYG  W+ +RKI    + S K++  +  +R +E+  L  ++ S+ +  E VN  +R+
Sbjct:   32 PPGPWKLPFIGSMHHLAGGRPHRVLRDLAKKYGPLMHLQLGEVSAVVVTSPDMAKEVLKTHDIAFASRPKLLAMDIICYDRCDIAFSPYGEYWKQMRKICVTEVLSAKSVRSFSSIRCDEVVRLIDSIQSSSSSGELVNFKERV 175          
BLAST of FC876452 vs. ExPASy Swiss-Prot
Match: C71BH_ARATH (Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=CYP71B17 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.844e-17
Identity = 48/157 (30.57%), Postives = 79/157 (50.32%), Query Frame = 1
Query:  160 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTE--PVNLAQRLNLCVVNALGRVMLG 624
            PP P   P++GNL  +G +PH+S   LA   G +M L LGF             + L+ HD +  +RP   G++ I+  ++D+ F PYG  W+  R+     LF  K L  + ++++ E   L + L+ +  +  PV+L++ L     + L RV  G
Sbjct:   31 PPSPPKLPVIGNLHQVGELPHRSFRRLAERTGHVMLLHLGFVPVTVISSREAAEEVLRTHDLDCCSRPNLVGSRLISRGFKDLNFTPYGEEWKERRRFLVGELFCSKKLQSFIYIKEVECNFLVKKLSESAVDQSPVDLSKTLFWLAASILFRVAFG 187          
BLAST of FC876452 vs. ExPASy Swiss-Prot
Match: C98A1_SORBI (Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.715e-17
Identity = 44/161 (27.33%), Postives = 82/161 (50.93%), Query Frame = 1
Query:  160 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVN------LAQRLNLCVVNALGRVMLG 624
            PPGP+PWP++GNL  + P+  +     A  +GP++ +  G              + LK +D   ++RP N   +  + N QD+++  YGP +  +RK+ ++ LF+ K L+  R +R++E+  +  ++  A T P N      +   L++   N + R+  G
Sbjct:   32 PPGPRPWPVLGNLRQIKPIRCRCFQEWAERYGPVISVWFGSGLTVVVSTSELAKEVLKENDQQLADRPRNRSTQRFSRNGQDLIWADYGPHYIKVRKLCNLELFTPKRLEALRPIREDEVTAMVESVYRAATAPGNEGKPMVVRNHLSMVAFNNITRLAFG 192          
BLAST of FC876452 vs. ExPASy Swiss-Prot
Match: C71BE_ARATH (Cytochrome P450 71B14 OS=Arabidopsis thaliana GN=CYP71B14 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 4.851e-17
Identity = 46/143 (32.17%), Postives = 74/143 (51.75%), Query Frame = 1
Query:  160 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGT--EPVNLAQRL 582
            PPGP   PI+GNL  LG  P +S+  L+  +G LM L+ G                LK  D+   +RP  +    + YN+ D+ F PY   WR +RK++ + L++ K +  +++VRQEE+A     +    +  + VN+ Q+L
Sbjct:   30 PPGPPRLPIIGNLHQLGSKPQRSLFKLSEKYGSLMSLKFGNVSAVVASTPETVKDVLKTFDAECCSRPYMTYPARVTYNFNDLAFSPYSKYWREVRKMTVIELYTAKRVKSFQNVRQEEVASFVDFIKQHASLEKTVNMKQKL 172          
BLAST of FC876452 vs. ExPASy Swiss-Prot
Match: C7D95_MENSP (Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 8.275e-17
Identity = 47/156 (30.13%), Postives = 83/156 (53.21%), Query Frame = 1
Query:  160 PPGPKPWPIVGNLPHL-GPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVNLAQRLNLCVVNALGRVMLG 624
            PPGP   P+VG+L  L G +P  ++A +A+ +GP+ +++LG              + +K+ D   ++R  + G + + Y+  DI+F PY   WR +RKI    L S + +  +  +RQ+EM+ L R L S+  E V++ +R+     + + R   G
Sbjct:   35 PPGPPKLPLVGHLHLLWGKLPQHAMADMAKKYGPVTHVQLGEVFSVVLSSREATKEAMKLLDPACADRFESIGTRIMWYDNDDIIFSPYSDHWRQMRKICVSELLSARNVRSFGFIRQDEMSRLLRHLQSSAGETVDMTERIATLTCSIICRAAFG 190          
BLAST of FC876452 vs. ExPASy Swiss-Prot
Match: C7D95_MENGR (Cytochrome P450 71D95 OS=Mentha gracilis GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 8.275e-17
Identity = 47/156 (30.13%), Postives = 83/156 (53.21%), Query Frame = 1
Query:  160 PPGPKPWPIVGNLPHL-GPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVNLAQRLNLCVVNALGRVMLG 624
            PPGP   P+VG+L  L G +P  ++A +A+ +GP+ +++LG              + +K+ D   ++R  + G + + Y+  DI+F PY   WR +RKI    L S + +  +  +RQ+EM+ L R L S+  E V++ +R+     + + R   G
Sbjct:   35 PPGPPKLPLVGHLHLLWGKLPQHAMADMAKKYGPVTHVQLGEVFSVVLSSREATKEAMKLLDPACADRFESIGTRIMWYDNDDIIFSPYSDHWRQMRKICVSELLSARNVRSFGFIRQDEMSRLLRHLQSSAGETVDMTERIATLTCSIICRAAFG 190          
BLAST of FC876452 vs. ExPASy Swiss-Prot
Match: C71BU_ARATH (Cytochrome P450 71B31 OS=Arabidopsis thaliana GN=CYP71B31 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 8.275e-17
Identity = 44/129 (34.11%), Postives = 66/129 (51.16%), Query Frame = 1
Query:  160 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALAS 546
            PPGP   P++GNL  LG + H S+  L+  HGP+M +R G              + LK HD    NRP         + Y+DI F  YG  WR ++K   + LFS K    +R++R+EE  +L + +++
Sbjct:   29 PPGPTGLPLIGNLHQLGRLLHSSLHKLSLEHGPVMLVRWGVVPMAVFSSNEAAKEVLKTHDLETCNRPKLVANGLFTHGYKDIGFTQYGEEWREMKKFVGLELFSPKKHKSFRYIREEEGDLLVKKISN 157          
BLAST of FC876452 vs. ExPASy Swiss-Prot
Match: C71BQ_ARATH (Cytochrome P450 71B26 OS=Arabidopsis thaliana GN=CYP71B26 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 8.275e-17
Identity = 45/140 (32.14%), Postives = 77/140 (55.00%), Query Frame = 1
Query:  163 PGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGT--EPVNLAQ 576
            P P  +PI+GNL  LG + HQS+  L++ +GP+M L+LG              Q L+ +D +  +RP  +G + ++YN  D+   PY   W+ LRK+ S  LFS   +   + ++ EE+  +  ++A + +   PVNL++
Sbjct:   33 PSPPGFPIIGNLHQLGELQHQSLWKLSKKYGPVMLLKLGKVPTLILSSSETAKQALRDYDLHCCSRPSLAGGRELSYNNLDMSSSPYNEYWKELRKLCSQELFSANKIQSIQPIKDEEVKKVIDSIAESSSLKNPVNLSK 172          
BLAST of FC876452 vs. ExPASy Swiss-Prot
Match: C71DF_MENPI (Cytochrome P450 71D15 OS=Mentha piperita GN=CYP71D15 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.081e-16
Identity = 45/156 (28.85%), Postives = 83/156 (53.21%), Query Frame = 1
Query:  160 PPGPKPWPIVGNLPHL-GPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVNLAQRLNLCVVNALGRVMLG 624
            PPGP   P++G+L  L G +P  ++A +A+ +GP+ +++LG              + +K+ D   +NR  + G + + Y+ +DI+F PY   WR +RKI    L S + +  +  +RQ+E++ L R L S+    V++ +R+     + + R   G
Sbjct:   36 PPGPPKLPLIGHLHLLWGKLPQHALASVAKEYGPVAHVQLGEVFSVVLSSREATKEAMKLVDPACANRFESIGTRIMWYDNEDIIFSPYSEHWRQMRKICVSELLSSRNVRSFGFIRQDEVSRLLRHLRSSAGAAVDMTERIETLTCSIICRAAFG 191          
BLAST of FC876452 vs. ExPASy Swiss-Prot
Match: C71AK_ARATH (Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=CYP71A20 PE=2 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.081e-16
Identity = 51/159 (32.08%), Postives = 74/159 (46.54%), Query Frame = 1
Query:  160 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEE----MAVLTRALASAGTEPVNLAQRLNLCVVNALGRVMLG 624
            PP P   P++GNL  L    H+S+  L+  +GPLM L  G                +K HD   +NRP       I    +D+ F PYG  WR ++ I   +L + K +  Y  +R+EE    +  L +A  S+   PVNL+Q L     + + RV LG
Sbjct:   33 PPSPWRLPVIGNLHQLSLHTHRSLRSLSLRYGPLMLLHFGRTPVLIVSSADVAHDVMKTHDLVCANRPKTKVVDKILSGGRDVAFAPYGEYWRQMKSICIQNLLNNKMVRSYEKIREEEIKRMIEKLEKASCSSSPSPVNLSQILMTLTNDIICRVALG 191          
The following BLAST results are available for this feature:
BLAST of FC876452 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 119
Match NameE-valueIdentityDescription
C71D6_SOLCH2.844e-1734.03Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71... [more]
C71BH_ARATH2.844e-1730.57Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=C... [more]
C98A1_SORBI3.715e-1727.33Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1... [more]
C71BE_ARATH4.851e-1732.17Cytochrome P450 71B14 OS=Arabidopsis thaliana GN=C... [more]
C7D95_MENSP8.275e-1730.13Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D9... [more]
C7D95_MENGR8.275e-1730.13Cytochrome P450 71D95 OS=Mentha gracilis GN=CYP71D... [more]
C71BU_ARATH8.275e-1734.11Cytochrome P450 71B31 OS=Arabidopsis thaliana GN=C... [more]
C71BQ_ARATH8.275e-1732.14Cytochrome P450 71B26 OS=Arabidopsis thaliana GN=C... [more]
C71DF_MENPI1.081e-1628.85Cytochrome P450 71D15 OS=Mentha piperita GN=CYP71D... [more]
C71AK_ARATH1.081e-1632.08Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionC32004H11EF DevOvary1 Citrus clementina cDNA clone C32004H11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876452 ID=FC876452; Name=FC876452; organism=Citrus clementina; type=EST; length=624bp
GGACTACTCGTACCATTTCTACGCTTTCTCTGGGAAACGAAACAAAGAGC
AATGTCTACTTTACCACTACTGATACTGTACACATCACTTTTGGCAATTG
TCATTTCTTTCCTTTTTAGCCTCCTCCGGAACAGACGCAGACACTCCTCC
CACCGTCTGCCTCCCGGTCCGAAACCCTGGCCAATAGTCGGAAACCTCCC
TCACTTGGGCCCTATGCCCCACCAATCCATAGCGGGTCTGGCCCGAACCC
ACGGCCCCCTCATGTACCTCCGGTTAGGCTTCGTTGACGTCGTCGTGGCC
GCTTCCGCTTCCGTGGCGGCCCAATTCCTGAAGATCCATGATTCCAACTT
CTCCAACCGCCCTCCCAACTCCGGCGCCAAGCACATCGCTTACAACTATC
AGGACATCGTTTTCCGGCCGTACGGCCCCCGCTGGCGGATGCTGAGGAAG
ATCAGCTCCGTTCATCTTTTCTCCGGCAAGGCCTTGGATGACTACAGGCA
CGTTCGCCAGGAAGAGATGGCGGTGCTCACGCGCGCGTTGGCGAGTGCAG
GAACGGAGCCGGTGAACTTAGCTCAACGGTTGAACTTGTGCGTTGTGAAT
GCCCTAGGGCGGGTGATGCTAGGC
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