FC876456

Overview
NameFC876456
Unique NameFC876456
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length558
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10364 contig Ccv1_Contig10364:1..558. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876456 vs. ExPASy Swiss-Prot
Match: PDI_ASPOR (Protein disulfide-isomerase OS=Aspergillus oryzae GN=pdiA PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 9.413e-16
Identity = 41/87 (47.13%), Postives = 57/87 (65.52%), Query Frame = 2
Query:   11 VLVEFYAPWCGHCKNLAPTYEKVAAAFALEDDVVVANLDADKYKDLAEKYGVSGFPTLKFFPKGNKDGE-EYGGGRDLEDFVSFINE 268
            VL+EFYAPWCGHCK LAP YE++A+ +    +V +A +DA    D+ +   ++GFPT+K F  G KD   EY G R +ED  +F+ E
Sbjct:  384 VLLEFYAPWCGHCKALAPKYEELASLYKDIPEVTIAKIDATA-NDVPD--SITGFPTIKLFAAGAKDSPVEYEGSRTVEDLANFVKE 467          

HSP 2 Score: 70.8626 bits (172), Expect = 4.835e-12
Identity = 37/84 (44.05%), Postives = 50/84 (59.52%), Query Frame = 2
Query:   11 VLVEFYAPWCGHCKNLAPTYEKVAAAFALEDDVVVANLDADKYKDLAEKYGVSGFPTLKFFPKGNKDGEEYGGGRDLEDFVSFI 262
            VL EF+APWCGHCK LAP YE+ AA    E ++ +  +D  + + L    GV G+PTLK F +G    + Y G R  E  VS++
Sbjct:   49 VLAEFFAPWCGHCKALAPKYEQ-AATELKEKNIPLVKVDCTEEEALCRDQGVEGYPTLKIF-RGLDAVKPYQGARQTEAIVSYM 130          
BLAST of FC876456 vs. ExPASy Swiss-Prot
Match: GSBP_CHICK (Dolichyl-diphosphooligosaccharide--protein glycotransferase OS=Gallus gallus PE=2 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 2.097e-15
Identity = 41/112 (36.61%), Postives = 63/112 (56.25%), Query Frame = 2
Query:   17 VEFYAPWCGHCKNLAPTYEKVAAAFALE-DDVVVANLDADKYKDLAEKYGVSGFPTLKFFPKGN-KDGEEYGGGRDLEDFVSFINEKCGTSRDGKGQLTSTAGIVASLDALV 346
            VEFYAP CGHCK LAP Y K       E  ++  A ++A +  DLA++YGV  +PT+KFF  G+    +EY  GR+ +D V+++ ++ G +        +   +V S +  V
Sbjct:   45 VEFYAPLCGHCKALAPDYAKAGGKLKAEGSEIKAAKVEATEESDLAQQYGVRAYPTIKFFKNGDTASPKEYTAGREADDIVNWLKKRTGPAATTLSDTAAAESLVDSSEITV 156          

HSP 2 Score: 73.559 bits (179), Expect = 7.459e-13
Identity = 36/97 (37.11%), Postives = 57/97 (58.76%), Query Frame = 2
Query:   11 VLVEFYAPWCGHCKNLAPTYEKVAAAFALEDDVVVANLDADKYKDLAEKYGVSGFPTLKFFP-KGNKDGEEYGGGRDLEDFVSFINEKCGTSRDGKG 298
            V +EFYAPWCGHCK LAP ++++  A+  ++++V+A +++   +   E   V  FPTLKFFP    +   +Y G R L+ +  F+       +DG G
Sbjct:  389 VFIEFYAPWCGHCKQLAPMWDRLGEAYKDDENIVIAKMESTANE--VEAIKVHSFPTLKFFPASAERTVIDYNGERTLDGYKKFLE---SGGQDGYG 480          
BLAST of FC876456 vs. ExPASy Swiss-Prot
Match: ERP60_SCHMA (Probable protein disulfide-isomerase ER-60 OS=Schistosoma mansoni PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 3.577e-15
Identity = 42/134 (31.34%), Postives = 68/134 (50.75%), Query Frame = 2
Query:   14 LVEFYAPWCGHCKNLAPTYEKVAAAFA-LEDDVVVANLDADKYKDLAEKYGVSGFPTLKFFPKGNKDGEEYGGGRDLEDFVSFINEKCGTSRDGKGQLTSTAGIVASLDALVKEFVAASGDEKKAVFSKIERGV 412
            LV+FYAPWCGHCK LAP +   A   +   +DV +  +D    + +  ++GVSG+PTLK F  G+ DG EY G R+     +++  + G        ++    +++     V  FV +S D     F  + + +
Sbjct:   38 LVKFYAPWCGHCKKLAPEFTSAAQIISGKTNDVKLVKVDCTTQESICSEFGVSGYPTLKIFRNGDLDG-EYNGPRNANGIANYMISRAGPVSKEVSTVSDVENVLSDDKPTVFAFVKSSSDPLIKTFMALAKSM 170          

HSP 2 Score: 80.8777 bits (198), Expect = 4.672e-15
Identity = 43/100 (43.00%), Postives = 56/100 (56.00%), Query Frame = 2
Query:   11 VLVEFYAPWCGHCKNLAPTYEKVAAAFALEDDVVVANLDADKYKDLAEKYGVSGFPTLKFFPKGNKDGE-EYGGGRDLEDFVSFI-----NEKCGTSRDG 292
            V+V F+A WCGHCKNL P YE+ A+    E ++V+A +DA    D+   Y V GFPT+ F PKG K     Y GGRD  D + ++      E  G  R G
Sbjct:  379 VMVVFHAGWCGHCKNLMPKYEEAASKVKNEPNLVLAAMDATA-NDVPSPYQVRGFPTIYFVPKGKKSSPVSYEGGRDTNDIIKYLAREATEELIGYDRSG 477          
BLAST of FC876456 vs. ExPASy Swiss-Prot
Match: Y5025_DICDI (Putative protein disulfide-isomerase DDB_G0275025 OS=Dictyostelium discoideum GN=DDB_G0275025 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.041e-14
Identity = 41/87 (47.13%), Postives = 54/87 (62.07%), Query Frame = 2
Query:   14 LVEFYAPWCGHCKNLAPTYEKVAAAFALEDDVVVANLDADKYKDLAEKYGVSGFPTLKFF---PKGNKDG--EEYGGGRDLEDFVSF 259
            +VEFYAPWCGHCK+L P YEKV+    L+  V +  ++ D+ K+L  +Y + GFPTLKFF   PK  K G  E+Y G R   +   F
Sbjct:   49 MVEFYAPWCGHCKSLKPEYEKVSN--NLKGLVKIGAINCDEEKELCGQYQIQGFPTLKFFSTNPKTGKKGQPEDYQGARSASEIAKF 133          
BLAST of FC876456 vs. ExPASy Swiss-Prot
Match: PDIA6_CAEEL (Probable protein disulfide-isomerase A6 OS=Caenorhabditis elegans GN=tag-320 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.775e-14
Identity = 38/88 (43.18%), Postives = 57/88 (64.77%), Query Frame = 2
Query:   14 LVEFYAPWCGHCKNLAPTYEKVAAAFALEDDVVVANLDADKYKDLAEKYGVSGFPTLKFFPKGN--KDGEEYGGGRDLEDFVSFINEK 271
            LVEF+APWCGHCK+L P ++  AAA  L+  V +  LDA  +  +A K+ + GFPT+K+F  G+   D ++Y GGR   D V++ + +
Sbjct:  186 LVEFFAPWCGHCKSLEPQWK--AAASELKGKVRLGALDATVHTVVANKFAIRGFPTIKYFAPGSDVSDAQDYDGGRQSSDIVAWASAR 271          

HSP 2 Score: 73.559 bits (179), Expect = 7.459e-13
Identity = 43/106 (40.57%), Postives = 60/106 (56.60%), Query Frame = 2
Query:   14 LVEFYAPWCGHCKNLAPTYEKVAAAFALEDDVVVANLDADKYKDLAEKYGVSGFPTLKFFPKGNKDGEEYGGGRD---LEDFVSFINEKCGTSR-DGKGQLTSTAG 319
            +VEFYAPWCGHCK+L P Y+K  AA AL+    V  +D  +++ +   Y V GFPTLK F    K   +Y G R    + D V    +K  ++R  GK   +S++G
Sbjct:   46 IVEFYAPWCGHCKSLVPEYKK--AASALKGVAKVGAVDMTQHQSVGGPYNVQGFPTLKIFGADKKKPTDYNGQRTAQAIADSVLAEAKKAVSARLGGKSSGSSSSG 149          
BLAST of FC876456 vs. ExPASy Swiss-Prot
Match: TXND5_HUMAN (Thioredoxin domain-containing protein 5 OS=Homo sapiens GN=TXNDC5 PE=1 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.151e-13
Identity = 36/83 (43.37%), Postives = 52/83 (62.65%), Query Frame = 2
Query:   17 VEFYAPWCGHCKNLAPTYEKVA-AAFALEDDVVVANLDADKYKDLAEKYGVSGFPTLKFFPKGNKDGEEYGGGRDLEDFVSFI 262
            ++FYAPWCGHCK LAPT+E+++   F     V +A +D    +++  KY V G+PTL  F +G K   E+ GGRDL+    F+
Sbjct:  343 IKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVRGYPTLLLF-RGGKKVSEHSGGRDLDSLHRFV 424          

HSP 2 Score: 72.4034 bits (176), Expect = 1.662e-12
Identity = 33/92 (35.87%), Postives = 53/92 (57.61%), Query Frame = 2
Query:   17 VEFYAPWCGHCKNLAPTYEKVAAAFALEDDVVVANLDADKYKDLAEKYGVSGFPTLKFFPKGNKDGEEYGGGRDLEDFVSFINEKCGTSRDG 292
            ++F+APWCGHCK LAPT+E++A      + V +  +D  ++ +L     V G+PTL +F  G K  ++Y G RDLE    ++  +   +  G
Sbjct:  210 IKFFAPWCGHCKALAPTWEQLALGLEHSETVKIGKVDCTQHYELCSGNQVRGYPTLLWFRDGKK-VDQYKGKRDLESLREYVESQLQRTETG 300          
BLAST of FC876456 vs. ExPASy Swiss-Prot
Match: PDI_YEAST (Protein disulfide-isomerase OS=Saccharomyces cerevisiae GN=PDI1 PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 1.503e-13
Identity = 36/85 (42.35%), Postives = 53/85 (62.35%), Query Frame = 2
Query:   11 VLVEFYAPWCGHCKNLAPTYEKVAAAFALEDDVVVANLDADKYKDLAEKYGVSGFPTLKFFPKGNKDGE-EYGGGRDLEDFVSFI 262
            VL EF+APWCGHCKN+AP Y K AA   +E ++ +A +D  + +DL  ++ + GFP+LK F   + +   +Y G R  E  V F+
Sbjct:   52 VLAEFFAPWCGHCKNMAPEYVK-AAETLVEKNITLAQIDCTENQDLCMEHNIPGFPSLKIFKNSDVNNSIDYEGPRTAEAIVQFM 135          

HSP 2 Score: 73.9442 bits (180), Expect = 5.711e-13
Identity = 40/97 (41.24%), Postives = 55/97 (56.70%), Query Frame = 2
Query:   11 VLVEFYAPWCGHCKNLAPTYEKVAAAFA-LEDDVVVANLDADKYKDLAEKYGVSGFPTLKFFPKGNK-DGEEYGGGRDLEDFVSFINEKCGTSRDGK 295
            VLV +YAPWCGHCK LAPTY+++A  +A    DV++A L  D  ++      + G+PT+  +P G K +   Y G R L+    FI E      DGK
Sbjct:  397 VLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKL--DHTENDVRGVVIEGYPTIVLYPGGKKSESVVYQGSRSLDSLFDFIKENGHFDVDGK 491          
BLAST of FC876456 vs. ExPASy Swiss-Prot
Match: TMX3_XENLA (Protein disulfide-isomerase TMX3 OS=Xenopus laevis GN=tmx3 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.272e-12
Identity = 38/89 (42.70%), Postives = 48/89 (53.93%), Query Frame = 2
Query:   14 LVEFYAPWCGHCKNLAPTYEKVAAAFALEDDVV-VANLDADKYKDLAEKYGVSGFPTLKFFPKGNKDGEEYGGGRDLEDFVSFINEKCG 277
            LV+FYAPWCGHCK L P + +V          + V  +DA  Y  +A ++GV GFPT+K   KG+     Y G R  ED V F N   G
Sbjct:   45 LVDFYAPWCGHCKKLEPVWNEVGIEIRTSGSPIRVGKIDATVYSSIASEFGVRGFPTIKAL-KGDM-AYNYRGPRTKEDIVEFANRVAG 131          
BLAST of FC876456 vs. ExPASy Swiss-Prot
Match: PDI2_DICDI (Protein disulfide-isomerase 2 OS=Dictyostelium discoideum GN=pdi2 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.272e-12
Identity = 38/88 (43.18%), Postives = 51/88 (57.95%), Query Frame = 2
Query:   11 VLVEFYAPWCGHCKNLAPTYEKVAAAFALEDDVVVANLDADKYKDLAEKYGVSGFPTLKFFPKGNKDGE-EYGGGR-DLEDFVSFINE 268
            VLVEFYAPWCGHCKNLAP Y+K+       + V +  +DAD   D+     + G+PT+  F   +K+    Y G R D  +FV FI +
Sbjct:  397 VLVEFYAPWCGHCKNLAPIYDKLGEYLKDVESVSIVKIDADS-NDVPSDIEIRGYPTIMLFKADDKENPISYEGQRNDHMNFVEFIQD 483          

HSP 2 Score: 71.633 bits (174), Expect = 2.834e-12
Identity = 33/86 (38.37%), Postives = 47/86 (54.65%), Query Frame = 2
Query:   14 LVEFYAPWCGHCKNLAPTYEKVAAAFALEDDVVVANLDADKYKDLAEKYGVSGFPTLKFFPKGNKDGEEYGGGRDLEDFVSFINEK 271
            LV FYAPWCGHCK L P YE+ A   +    + +A +D  +++ L ++  V G+PTL  F  G    E Y G R  +  V  + E+
Sbjct:   62 LVMFYAPWCGHCKTLKPLYEEAAKQLSANKKIAIAKVDCTQHEQLCKQNKVQGYPTLVVFKNGK--AEPYEGDRTTKSIVQTLEEE 145          
BLAST of FC876456 vs. ExPASy Swiss-Prot
Match: BS2_TRYBB (Bloodstream-specific protein 2 OS=Trypanosoma brucei brucei GN=BS2 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.662e-12
Identity = 37/93 (39.78%), Postives = 53/93 (56.99%), Query Frame = 2
Query:    2 GTRVLVEFYAPWCGHCKNLAPTYEKVAAAFALEDDVVVANLDADKYKDLAEKYGVSGFPTLKFFPKGNKDGEEYGGGRDLEDFVSFINEKCGT 280
            G  +L+ F+APWCGHCKN APT++K+A  F    D++VA LDA      +  + V+ FPT+ F P G K    + G R  E+   F+ +   T
Sbjct:  366 GKDMLILFFAPWCGHCKNFAPTFDKIAKEFD-ATDLIVAELDATANYVNSSTFTVTAFPTVFFVPNGGKP-VVFEGERSFENVYEFVRKHVTT 456          
The following BLAST results are available for this feature:
BLAST of FC876456 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 68
Match NameE-valueIdentityDescription
PDI_ASPOR9.413e-1647.13Protein disulfide-isomerase OS=Aspergillus oryzae ... [more]
GSBP_CHICK2.097e-1536.61Dolichyl-diphosphooligosaccharide--protein glycotr... [more]
ERP60_SCHMA3.577e-1531.34Probable protein disulfide-isomerase ER-60 OS=Schi... [more]
Y5025_DICDI1.041e-1447.13Putative protein disulfide-isomerase DDB_G0275025 ... [more]
PDIA6_CAEEL1.775e-1443.18Probable protein disulfide-isomerase A6 OS=Caenorh... [more]
TXND5_HUMAN1.151e-1343.37Thioredoxin domain-containing protein 5 OS=Homo sa... [more]
PDI_YEAST1.503e-1342.35Protein disulfide-isomerase OS=Saccharomyces cerev... [more]
TMX3_XENLA1.272e-1242.70Protein disulfide-isomerase TMX3 OS=Xenopus laevis... [more]
PDI2_DICDI1.272e-1243.18Protein disulfide-isomerase 2 OS=Dictyostelium dis... [more]
BS2_TRYBB1.662e-1239.78Bloodstream-specific protein 2 OS=Trypanosoma bruc... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN2CA03RM1 EHR Citrus clementina cDNA clone KN0AAN2CA03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876456 ID=FC876456; Name=FC876456; organism=Citrus clementina; type=EST; length=558bp
CGGCACGAGGGTTTTGGTTGAATTTTATGCACCATGGTGTGGCCATTGCA
AAAACCTTGCGCCTACATATGAAAAGGTGGCAGCCGCATTTGCATTGGAA
GATGATGTAGTCGTTGCTAATTTGGATGCTGACAAATACAAGGATCTGGC
TGAGAAGTATGGAGTTAGTGGATTTCCTACATTGAAGTTCTTTCCAAAAG
GCAACAAAGATGGTGAGGAATATGGGGGTGGCAGAGATTTGGAAGACTTT
GTTTCTTTCATCAATGAAAAATGTGGCACCAGTCGTGATGGAAAAGGACA
ACTTACTTCAACGGCGGGTATAGTTGCGAGCTTAGATGCCTTGGTGAAGG
AATTTGTTGCTGCTAGCGGTGATGAGAAGAAGGCAGTCTTCTCAAAGATT
GAACGGGGAGTTGAGGTGCTTGAGGGTTCCACTGCCAGGCATGGGAAGAT
TTACTTGAAAGTTGCAAAGAACTATATGGACAAAGGGAGTGATTATGCGA
AAAAGGAAATTGATCGCCTCCAGCGTATGCTTGACAAGTCAATCAGCGCG
GCAAAAGC
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