FC876468
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876468 vs. ExPASy Swiss-Prot
Match: DRE2H_ARATH (Putative dehydration-responsive element-binding protein 2H OS=Arabidopsis thaliana GN=DREB2H PE=5 SV=3) HSP 1 Score: 72.0182 bits (175), Expect = 3.258e-12 Identity = 32/59 (54.24%), Postives = 42/59 (71.19%), Query Frame = 2 Query: 260 YKGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPIAAARAYDTAVFYLRGPSARLNFPEL 436 Y G+R R WGKWVAEIREP + +++WLG++++ AA AYD A + G SARLN P L Sbjct: 67 YTGVRQRTWGKWVAEIREPGRGAKLWLGTFSSSYEAALAYDEASKAIYGQSARLNLPLL 125
BLAST of FC876468 vs. ExPASy Swiss-Prot
Match: ERF03_ARATH (Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana GN=ERF003 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.255e-12 Identity = 31/57 (54.39%), Postives = 40/57 (70.18%), Query Frame = 2 Query: 260 YKGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPIAAARAYDTAVFYLRGPSARLNFP 430 ++G+R R WG WV+EIR P ++RIWLG++ T AARAYD A + GP AR NFP Sbjct: 8 FRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFP 64
BLAST of FC876468 vs. ExPASy Swiss-Prot
Match: DRE1F_ARATH (Dehydration-responsive element-binding protein 1F OS=Arabidopsis thaliana GN=DREB1F PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.257e-12 Identity = 34/58 (58.62%), Postives = 40/58 (68.97%), Query Frame = 2 Query: 260 YKGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPIAAARAYDTAVFYLRGPSARLNFPE 433 Y+GIR R KWV E+REP + RIWLG+Y T AARA+D AV LRG SA LNF + Sbjct: 30 YRGIRRRNGDKWVCEVREPTHQRRIWLGTYPTADMAARAHDVAVLALRGRSACLNFAD 87
BLAST of FC876468 vs. ExPASy Swiss-Prot
Match: ERF2_TOBAC (Ethylene-responsive transcription factor 2 OS=Nicotiana tabacum GN=ERF2 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.479e-12 Identity = 33/61 (54.10%), Postives = 42/61 (68.85%), Query Frame = 2 Query: 260 YKGIRMRKWGKWVAEIREPNKR-SRIWLGSYTTPIAAARAYDTAVFYLRGPSARLNFPELI 439 Y+G+R R WGK+ AEIR+P K +R+WLG+Y T AA AYD A + +RG A LNFP I Sbjct: 99 YRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEEAALAYDKAAYRMRGSKALLNFPHRI 159
BLAST of FC876468 vs. ExPASy Swiss-Prot
Match: ERF2_NICSY (Ethylene-responsive transcription factor 2 OS=Nicotiana sylvestris GN=ERF2 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.479e-12 Identity = 33/61 (54.10%), Postives = 42/61 (68.85%), Query Frame = 2 Query: 260 YKGIRMRKWGKWVAEIREPNKR-SRIWLGSYTTPIAAARAYDTAVFYLRGPSARLNFPELI 439 Y+G+R R WGK+ AEIR+P K +R+WLG+Y T AA AYD A + +RG A LNFP I Sbjct: 103 YRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEEAALAYDKAAYRMRGSKALLNFPHRI 163
BLAST of FC876468 vs. ExPASy Swiss-Prot
Match: ERF1_TOBAC (Ethylene-responsive transcription factor 1 OS=Nicotiana tabacum GN=ERF1 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.479e-12 Identity = 33/61 (54.10%), Postives = 42/61 (68.85%), Query Frame = 2 Query: 260 YKGIRMRKWGKWVAEIREPNKR-SRIWLGSYTTPIAAARAYDTAVFYLRGPSARLNFPELI 439 Y+G+R R WGK+ AEIR+P K +R+WLG+Y T AA AYD A + +RG A LNFP I Sbjct: 105 YRGVRRRPWGKFAAEIRDPAKNGARVWLGTYETDEEAAIAYDKAAYRMRGSKAHLNFPHRI 165
BLAST of FC876468 vs. ExPASy Swiss-Prot
Match: DRE1E_ARATH (Dehydration-responsive element-binding protein 1E OS=Arabidopsis thaliana GN=DREB1E PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.479e-12 Identity = 36/80 (45.00%), Postives = 48/80 (60.00%), Query Frame = 2 Query: 260 YKGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPIAAARAYDTAVFYLRGPSARLNFPELIFQEDDLRDVSAASIRKKATE 499 Y+G+R R KWV E+REP + R+WLG+Y T AARA+D AV LRG SA LNF + ++ +IR+ A E Sbjct: 30 YRGVRRRDGDKWVCEVREPIHQRRVWLGTYPTADMAARAHDVAVLALRGRSACLNFSDSAWRLPVPASTDPDTIRRTAAE 109
BLAST of FC876468 vs. ExPASy Swiss-Prot
Match: EF100_ARATH (Ethylene-responsive transcription factor 1A OS=Arabidopsis thaliana GN=ERF1A PE=1 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 1.617e-11 Identity = 39/86 (45.35%), Postives = 52/86 (60.47%), Query Frame = 2 Query: 260 YKGIRMRKWGKWVAEIREPNKR-SRIWLGSYTTPIAAARAYDTAVFYLRGPSARLNFPELI--FQEDDLRDVSAASIRKKATEVGA 508 Y+G+R R WGK+ AEIR+P K +R+WLG++ T AA AYD A F +RG A LNFP + + D +R S S + E GA Sbjct: 148 YRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNFPLRVNSGEPDPVRIKSKRSSFSSSNENGA 233
BLAST of FC876468 vs. ExPASy Swiss-Prot
Match: ERF98_ARATH (Ethylene-responsive transcription factor ERF098 OS=Arabidopsis thaliana GN=ERF098 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.112e-11 Identity = 33/66 (50.00%), Postives = 45/66 (68.18%), Query Frame = 2 Query: 260 YKGIRMRKWGKWVAEIREPNKR-SRIWLGSYTTPIAAARAYDTAVFYLRGPSARLNFPELIFQEDD 454 ++G+R R WGK+ AEIR+P++ +R+WLG++ T AARAYD A F LRG A LNFP + D Sbjct: 20 FRGVRRRPWGKFAAEIRDPSRNGARLWLGTFETAEEAARAYDRAAFNLRGHLAILNFPNEYYPRMD 85
BLAST of FC876468 vs. ExPASy Swiss-Prot
Match: DRE1G_ORYSJ (Dehydration-responsive element-binding protein 1G OS=Oryza sativa subsp. japonica GN=DREB1G PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.758e-11 Identity = 40/103 (38.83%), Postives = 55/103 (53.40%), Query Frame = 2 Query: 260 YKGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPIAAARAYDTAVFYLRGPSARLNF---------PELIFQEDDLRDV---SAASIRKKATEVGAKVDALQAA 532 +KG+R R G+WV E+REP+ + RIWLG++ T AARA+D A LRG +A LNF P + DD+R +A + R E A + AA Sbjct: 55 FKGVRRRNPGRWVCEVREPHGKQRIWLGTFETAEMAARAHDVAALALRGRAACLNFADSPRRLRVPPIGASHDDIRRAAAEAAEAFRPPPDESNAATEVAAAA 157 The following BLAST results are available for this feature:
BLAST of FC876468 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 121
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876468 ID=FC876468; Name=FC876468; organism=Citrus clementina; type=EST; length=683bpback to top |