FC876468
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876468 vs. ExPASy Swiss-Prot
Match: ERF1_ORYSJ (Ethylene-responsive transcription factor 1 OS=Oryza sativa subsp. japonica GN=EREBP1 PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.564e-13 Identity = 31/58 (53.45%), Postives = 41/58 (70.69%), Query Frame = 2 Query: 260 YKGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPIAAARAYDTAVFYLRGPSARLNFPE 433 ++GIR R WGKW AEIR+P K R+WLG++ + AARAYD +RG A++NFPE Sbjct: 120 FRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNSAEEAARAYDAEARRIRGKKAKVNFPE 177
BLAST of FC876468 vs. ExPASy Swiss-Prot
Match: EF107_ARATH (Ethylene-responsive transcription factor ERF107 OS=Arabidopsis thaliana GN=ERF107 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.564e-13 Identity = 36/58 (62.07%), Postives = 44/58 (75.86%), Query Frame = 2 Query: 260 YKGIRMRKWGKWVAEIREPNKR-SRIWLGSYTTPIAAARAYDTAVFYLRGPSARLNFP 430 Y+G+R R WGK+ AEIR+P K+ SRIWLG++ + I AARAYD A F LRG A LNFP Sbjct: 107 YRGVRRRPWGKFAAEIRDPAKKGSRIWLGTFESDIDAARAYDYAAFKLRGRKAVLNFP 164
BLAST of FC876468 vs. ExPASy Swiss-Prot
Match: EF106_ARATH (Ethylene-responsive transcription factor ERF106 OS=Arabidopsis thaliana GN=ERF106 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.564e-13 Identity = 35/58 (60.34%), Postives = 44/58 (75.86%), Query Frame = 2 Query: 260 YKGIRMRKWGKWVAEIREPNKR-SRIWLGSYTTPIAAARAYDTAVFYLRGPSARLNFP 430 Y+G+R R WGK+ AEIR+P K+ SRIWLG++ + + AARAYD A F LRG A LNFP Sbjct: 110 YRGVRRRPWGKFAAEIRDPAKKGSRIWLGTFESDVDAARAYDCAAFKLRGRKAVLNFP 167
BLAST of FC876468 vs. ExPASy Swiss-Prot
Match: CRF4_ARATH (Ethylene-responsive transcription factor CRF4 OS=Arabidopsis thaliana GN=CRF4 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.564e-13 Identity = 32/56 (57.14%), Postives = 38/56 (67.86%), Query Frame = 2 Query: 260 YKGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPIAAARAYDTAVFYLRGPSARLNF 427 Y+G+R R WGKW AEIR+P +R RIWLG++ T AA YD A LRGP A NF Sbjct: 117 YRGVRQRPWGKWAAEIRDPEQRRRIWLGTFATAEEAAIVYDNAAIKLRGPDALTNF 172
BLAST of FC876468 vs. ExPASy Swiss-Prot
Match: PTI6_SOLLC (Pathogenesis-related genes transcriptional activator PTI6 OS=Solanum lycopersicum GN=PTI6 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.573e-13 Identity = 30/57 (52.63%), Postives = 39/57 (68.42%), Query Frame = 2 Query: 260 YKGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPIAAARAYDTAVFYLRGPSARLNFP 430 ++G+R R WG+W AEIR+P + R+WLG+Y TP AA YD A L+GP A NFP Sbjct: 98 FRGVRQRPWGRWAAEIRDPTRGKRVWLGTYDTPEEAAVVYDKAAVKLKGPDAVTNFP 154
BLAST of FC876468 vs. ExPASy Swiss-Prot
Match: CRF6_ARATH (Ethylene-responsive transcription factor CRF6 OS=Arabidopsis thaliana GN=CRF6 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.573e-13 Identity = 37/73 (50.68%), Postives = 48/73 (65.75%), Query Frame = 2 Query: 260 YKGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPIAAARAYDTAVFYLRGPSARLNF--PELIFQEDDLRDVSA 472 Y+G+R R WGK+ AEIR+P+ R+RIWLG++ T AA AYD A +L+GP A NF P DL+ VSA Sbjct: 105 YRGVRQRPWGKFAAEIRDPSSRTRIWLGTFVTAEEAAIAYDRAAIHLKGPKALTNFLTPPTPTPVIDLQTVSA 177
BLAST of FC876468 vs. ExPASy Swiss-Prot
Match: ERF81_ARATH (Ethylene-responsive transcription factor 12 OS=Arabidopsis thaliana GN=ERF12 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.120e-12 Identity = 31/57 (54.39%), Postives = 43/57 (75.44%), Query Frame = 2 Query: 260 YKGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPIAAARAYDTAVFYLRGPSARLNFP 430 Y+G+R R WG++ AEIR+P K++R+WLG++ TP AA AYD A +LRG A+ NFP Sbjct: 12 YRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARFLRGIKAKTNFP 68
BLAST of FC876468 vs. ExPASy Swiss-Prot
Match: DRE2G_ARATH (Dehydration-responsive element-binding protein 2G OS=Arabidopsis thaliana GN=DREB2G PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.120e-12 Identity = 31/55 (56.36%), Postives = 41/55 (74.55%), Query Frame = 2 Query: 260 YKGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPIAAARAYDTAVFYLRGPSARLN 424 ++G+R R WGKWVAEIREPN+ +R+WLG++ T + AA AYD A L G A+LN Sbjct: 34 FRGVRQRTWGKWVAEIREPNRGTRLWLGTFNTSVEAAMAYDEAAKKLYGHEAKLN 88
BLAST of FC876468 vs. ExPASy Swiss-Prot
Match: ERF80_ARATH (Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana GN=ERF9 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.462e-12 Identity = 30/57 (52.63%), Postives = 42/57 (73.68%), Query Frame = 2 Query: 260 YKGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPIAAARAYDTAVFYLRGPSARLNFP 430 ++G+R R WG++ AEIR+P K++R+WLG++ T AARAYDTA RG A+ NFP Sbjct: 33 FRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFRGSKAKTNFP 89
BLAST of FC876468 vs. ExPASy Swiss-Prot
Match: ERF27_ARATH (Ethylene-responsive transcription factor ERF027 OS=Arabidopsis thaliana GN=ERF027 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.462e-12 Identity = 41/83 (49.40%), Postives = 47/83 (56.63%), Query Frame = 2 Query: 260 YKGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPIAAARAYDTAVFYLRGPSARLNFPELIFQEDDLRDVSAASIRKKATEVGA 508 Y+GIR R GKWV+EIREP K +RIWLG+Y AA AYD A L+G A LNFP + SAA IR A A Sbjct: 19 YRGIRCRS-GKWVSEIREPRKTTRIWLGTYPMAEMAAAAYDVAAMALKGREAVLNFPGSVGSYPVPESTSAADIRAAAAAAAA 100 The following BLAST results are available for this feature:
BLAST of FC876468 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 121
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876468 ID=FC876468; Name=FC876468; organism=Citrus clementina; type=EST; length=683bpback to top |