FC876483
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876483 vs. ExPASy Swiss-Prot
Match: VAMP7_MOUSE (Vesicle-associated membrane protein 7 OS=Mus musculus GN=Vamp7 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 7.785e-26 Identity = 59/163 (36.20%), Postives = 100/163 (61.35%), Query Frame = 2 Query: 71 SLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENNEKVLDRGEKIELLVDKTE 559 +++++ VARGT ILA++ GNF + Q L K+P+ NNK TY+ + F+Y+ ++ Y + + R +FL VK+ F Y G +A TA+ ++N EF S L +++ ++ + + K+ + +AQV E+KG+M+ N + V RGE++ELL+DKTE Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFSFLNEVKKRFQTTY-GSRAQTALPYAMNSEFSSVLAAQLKHHSEN-KSLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTE 162
BLAST of FC876483 vs. ExPASy Swiss-Prot
Match: VAMP7_CHICK (Vesicle-associated membrane protein 7 OS=Gallus gallus GN=VAMP7 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.017e-25 Identity = 62/165 (37.58%), Postives = 98/165 (59.39%), Query Frame = 2 Query: 71 SLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDHPEE--ISKLAKVKAQVSEVKGVMMENNEKVLDRGEKIELLVDKTE 559 +++++ VARGT ILA++ GNF + Q L K+P+ NNK TY+ + F+Y+ ++ Y + + R FL +K+ F Y G +A TA+ ++N EF S L ++Y H E ++A+ +AQV E+KG+M+ N + V RGEK+ELL+DKTE Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIIYLCITDDDFERSRAFNFLNEIKKRFQTTY-GSRAQTALPYAMNSEFSSVLAAQLKY---HSESKGTDQVAETQAQVDELKGIMVRNIDLVAQRGEKLELLIDKTE 162
BLAST of FC876483 vs. ExPASy Swiss-Prot
Match: VAMP7_RAT (Vesicle-associated membrane protein 7 OS=Rattus norvegicus GN=Vamp7 PE=1 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.328e-25 Identity = 58/163 (35.58%), Postives = 99/163 (60.74%), Query Frame = 2 Query: 71 SLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENNEKVLDRGEKIELLVDKTE 559 +++++ VARGT ILA++ GNF + Q L K+P+ NNK TY+ + F+Y+ ++ Y + + R FL VK+ F Y G +A TA+ ++N EF S L +++ ++ + + ++ + +AQV E+KG+M+ N + V RGE++ELL+DKTE Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFGFLNEVKKRFQTTY-GSRAQTALPYAMNSEFSSVLAAQLKHHSEN-QSLDRVTETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTE 162
BLAST of FC876483 vs. ExPASy Swiss-Prot
Match: VA712_ARATH (Vesicle-associated membrane protein 712 OS=Arabidopsis thaliana GN=VAMP712 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.328e-25 Identity = 62/163 (38.04%), Postives = 105/163 (64.42%), Query Frame = 2 Query: 71 SLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKF-TYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENNEKVLDRGEKIELLVDKT 556 S++Y+ VARGTV+LAE + + N ++IA Q L+K+P + +Y+ D + F+ +G T +A E AGR+IP +FLE + + F + YG +A A ++N EF L + ++Y + P ++++K ++++V+ VM+EN + +LDRGE++ELLVDKT Sbjct: 2 SILYALVARGTVVLAELSTTSTNASTIAKQILEKIPGNGDSHVSYSQDRYVFHVKRTDGLTVLCMADEDAGRRIPFSFLEDIHQRFVRTYGRA-IHSAQAYAMNDEFSRVLNQQIEYYSNDPNA-DTISRIKGEMNQVRDVMIENIDNILDRGERLELLVDKT 162
BLAST of FC876483 vs. ExPASy Swiss-Prot
Match: VAMP7_HUMAN (Vesicle-associated membrane protein 7 OS=Homo sapiens GN=VAMP7 PE=1 SV=3) HSP 1 Score: 114.39 bits (285), Expect = 3.864e-25 Identity = 58/163 (35.58%), Postives = 99/163 (60.74%), Query Frame = 2 Query: 71 SLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENNEKVLDRGEKIELLVDKTE 559 +++++ VARGT ILA++ GNF + Q L K+P+ NNK TY+ + F+Y+ ++ Y + + R FL +K+ F Y G +A TA+ ++N EF S L +++ ++ + + K+ + +AQV E+KG+M+ N + V RGE++ELL+DKTE Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFNFLNEIKKRFQTTY-GSRAQTALPYAMNSEFSSVLAAQLKHHSEN-KGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTE 162
BLAST of FC876483 vs. ExPASy Swiss-Prot
Match: VAMP7_BOVIN (Vesicle-associated membrane protein 7 OS=Bos taurus GN=VAMP7 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 3.864e-25 Identity = 58/163 (35.58%), Postives = 99/163 (60.74%), Query Frame = 2 Query: 71 SLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENNEKVLDRGEKIELLVDKTE 559 +++++ VARGT ILA++ GNF + Q L K+P+ NNK TY+ + F+Y+ ++ Y + + R FL +K+ F Y G +A TA+ ++N EF S L +++ ++ + + K+ + +AQV E+KG+M+ N + V RGE++ELL+DKTE Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFNFLNEIKKRFQTTY-GSRAQTALPYAMNSEFSSVLAAQLKHHSEN-KGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTE 162
BLAST of FC876483 vs. ExPASy Swiss-Prot
Match: VAM7B_DICDI (Vesicle-associated membrane protein 7B OS=Dictyostelium discoideum GN=vamp7B PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 5.046e-25 Identity = 60/163 (36.81%), Postives = 98/163 (60.12%), Query Frame = 2 Query: 74 LIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMEN-NEKVLDRGEKIELLVDKTE 559 +IYS VARG+ +LAE+T GNF +I + L +P + K +Y + + F+YLV + TY +A E GR+IP FL+ VK F Y G K TA+A +N +F L+ M + + + +++ A++ EVK +++ + ++L RGEKIE+LV++T+ Sbjct: 3 IIYSLVARGSSVLAEFTSTNGNFVTITRRILDLIPPNDTKMSYVYEKYIFHYLVSDTLTYLCMADEEFGRRIPFTFLDDVKNRFKSMY-GDKGKTAIAYGMNSDFSRTLENLMDH-YSNTTRVDTMSRTMAEIDEVKNILVSDIAPQLLKRGEKIEMLVERTD 163
BLAST of FC876483 vs. ExPASy Swiss-Prot
Match: VAMP7_PONAB (Vesicle-associated membrane protein 7 OS=Pongo abelii GN=VAMP7 PE=2 SV=3) HSP 1 Score: 113.235 bits (282), Expect = 8.608e-25 Identity = 58/163 (35.58%), Postives = 98/163 (60.12%), Query Frame = 2 Query: 71 SLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENNEKVLDRGEKIELLVDKTE 559 +++++ VARGT ILA++ GNF + Q L K+P+ NNK TY + F+Y+ ++ Y + + R FL +K+ F Y G +A TA+ ++N EF S L +++ ++ + + K+ + +AQV E+KG+M+ N + V RGE++ELL+DKTE Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYPHGNYLFHYICQDRIVYLCITDDDFERSRAFNFLNEIKKRFQTTY-GSRAQTALPYAMNSEFSSVLAAQLKHHSEN-KGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTE 162
BLAST of FC876483 vs. ExPASy Swiss-Prot
Match: VAM7A_DICDI (Vesicle-associated membrane protein 7A OS=Dictyostelium discoideum GN=vamp7A PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 6.384e-20 Identity = 58/167 (34.73%), Postives = 92/167 (55.09%), Query Frame = 2 Query: 59 MGQQSLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENNEKVLDRGEKIELLVDKTE 559 M Q ++Y+ V+ V L E+ GNF +A + + K+P T+ K Y + H F+Y+ EN + + E G QIP FL +++ F + YG + + + + F L+E M+Y +P+ +K+ V QVSE KG + + EK + RGEKIE++VDKTE Sbjct: 1 MSQTDILYACVSYKGVCLVEHKIANGNFIDLARRLITKIPPTSKKI-YTSENHNFHYISENDLAFLCLCHEKLGVQIPSEFLSDIRQQFIRSYGQSFSQNSPTATYDP-FIRVLEERMKY-YSNPKS-NKMNLVMDQVSEAKGALTDAIEKTIHRGEKIEIIVDKTE 163 The following BLAST results are available for this feature:
BLAST of FC876483 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876483 ID=FC876483; Name=FC876483; organism=Citrus clementina; type=EST; length=561bpback to top |