FC876490

Overview
NameFC876490
Unique NameFC876490
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length704
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876490 vs. ExPASy Swiss-Prot
Match: BEV1B_BETVE (Major pollen allergen Bet v 1-B OS=Betula verrucosa GN=BETV1B PE=1 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 7.409e-31
Identity = 71/160 (44.38%), Postives = 100/160 (62.50%), Query Frame = -3
Query:  154 MGVLTLNVEDTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHWVDALDKENKIYNYPAIEGEGDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPNA 633
            MGV     E TS +P  +LFK F+L+ DTL+PKV PQ + +VE I G+GGPG+IKK  F EG+ +KY K  VD +D  N  Y+Y  I  EG A   T++ +  E K+V TPDGGS   +  K++ K   E+K E +K   EK + + +A+E+Y LA+ +A
Sbjct:    1 MGVFNYETETTSVIPAARLFKAFILEGDTLIPKVAPQAISSVENIEGNGGPGTIKKITFPEGSPFKYVKERVDEVDHANFKYSYSMI--EGGALGDTLEKICNEIKIVATPDGGSILKISNKYHTKGDHEMKAEHMKAIKEKGEALLRAVESYLLAHSDA 158          
BLAST of FC876490 vs. ExPASy Swiss-Prot
Match: BEV1C_BETVE (Major pollen allergen Bet v 1-C OS=Betula verrucosa GN=BETV1C PE=1 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 9.677e-31
Identity = 71/160 (44.38%), Postives = 100/160 (62.50%), Query Frame = -3
Query:  154 MGVLTLNVEDTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHWVDALDKENKIYNYPAIEGEGDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPNA 633
            MGV     E TS +P  +LFK F+L+ DTL+PKV PQ + +VE I G+GGPG+IKK  F EG+ +KY K  VD +D  N  Y+Y  I  EG A   T++ +  E K+V TPDGGS   +  K++ K   E+K E +K   EK + + +A+E+Y LA+ +A
Sbjct:    1 MGVFNYESETTSVIPAARLFKAFILEGDTLIPKVAPQAISSVENIEGNGGPGTIKKITFPEGSPFKYVKERVDEVDHANFKYSYSMI--EGGALGDTLEKICNEIKIVATPDGGSILKISNKYHTKGDQEMKAEHMKAIKEKGEALLRAVESYLLAHSDA 158          
BLAST of FC876490 vs. ExPASy Swiss-Prot
Match: BEV1K_BETVE (Major pollen allergen Bet v 1-K OS=Betula verrucosa GN=BETV1K PE=1 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 1.264e-30
Identity = 71/160 (44.38%), Postives = 100/160 (62.50%), Query Frame = -3
Query:  154 MGVLTLNVEDTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHWVDALDKENKIYNYPAIEGEGDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPNA 633
            MGV     E TS +P  +LFK F+L+ DTL+PKV PQ + +VE I G+GGPG+IKK  F EG+ +KY K  VD +D  N  Y+Y  I  EG A   T++ +  E K+V TPDGGS   +  K++ K   E+K E +K   EK + + +A+E+Y LA+ +A
Sbjct:    1 MGVFNYESETTSVIPAARLFKAFILEGDTLIPKVAPQAISSVENIEGNGGPGTIKKITFPEGSPFKYVKERVDEVDHANFKYSYSMI--EGGALGDTLEKICNEIKIVATPDGGSILKISNKYHTKGDHEMKAEHMKAIKEKGEALLRAVESYLLAHSDA 158          
BLAST of FC876490 vs. ExPASy Swiss-Prot
Match: ABR18_PEA (ABA-responsive protein ABR18 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.651e-30
Identity = 68/159 (42.77%), Postives = 102/159 (64.15%), Query Frame = -3
Query:  157 MGVLTLNVEDTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHWVDALDKENKIYNYPAIEGEGDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPN 633
            MGV T   + TST+PP KLFK  V   D ++PKV+  + K VE++ G+GGPG++KK  FVEG    Y  H V+A+D     YNY  + G G ++I  ++ +S+E+K+   P+GGS   +++K++ K  A+  E++V+ G  K   +FKA+EAY LANPN
Sbjct:    1 MGVFTYENDTTSTVPPAKLFKAVVHDADLIVPKVVDSI-KTVEILEGNGGPGTVKKLTFVEGGQTLYVLHKVEAIDDAKFEYNYSIVGGVGISDI--VEKISFEAKLFEGPNGGSVGKMIVKYHTKGDAKPIEKEVEEGKAKGDALFKAIEAYVLANPN 156          
BLAST of FC876490 vs. ExPASy Swiss-Prot
Match: BEV1F_BETVE (Major pollen allergen Bet v 1-F/I OS=Betula verrucosa GN=BETV1F PE=1 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 2.816e-30
Identity = 71/162 (43.83%), Postives = 100/162 (61.73%), Query Frame = -3
Query:  154 MGVLTLNVEDTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHWVDALDKENKIYNYPAIEG--EGDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPNA 633
            MGV    +E TS +P  +LFK F+L  D L PKV PQ + +VE I G+GGPG+IKK +F EG  +KY K  VD +D  N  Y+Y  IEG   GD    T++ +S E K+V TP+GGS   +  K++ K   E+K EQ+K   E  + + +A+E+Y LA+ +A
Sbjct:    1 MGVFNYEIEATSVIPAARLFKAFILDGDNLFPKVAPQAISSVENIEGNGGPGTIKKISFPEGFPFKYVKDRVDEVDHTNFKYSYSVIEGGPVGD----TLEKISNEIKIVATPNGGSILKINNKYHTKGDHEVKAEQIKASKEMGETLLRAVESYLLAHSDA 158          
BLAST of FC876490 vs. ExPASy Swiss-Prot
Match: MPAG1_ALNGL (Major pollen allergen Aln g 1 OS=Alnus glutinosa PE=1 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 4.803e-30
Identity = 74/162 (45.68%), Postives = 98/162 (60.49%), Query Frame = -3
Query:  154 MGVLTLNVEDTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHWVDALDKENKIYNYPAIEG--EGDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPNA 633
            MGV     E  S +P  +LFK F+L  D LLPKV P+ V +VE I G+GGPG+IKK  F EG+ +KY K  VD +D+ N  Y++  IEG   GDA    ++ V  E K+V  PDGGS   +  KF+ K   EI  EQ+K   EK  G+ KA+E+Y LA+ +A
Sbjct:    1 MGVFNYEAETPSVIPAARLFKAFILDGDKLLPKVAPEAVSSVENIEGNGGPGTIKKITFPEGSPFKYVKERVDEVDRVNFKYSFSVIEGGAVGDA----LEKVCNEIKIVAAPDGGSILKISNKFHTKGDHEINAEQIKIEKEKAVGLLKAVESYLLAHSDA 158          
BLAST of FC876490 vs. ExPASy Swiss-Prot
Match: BEV1J_BETVE (Major pollen allergen Bet v 1-J OS=Betula verrucosa GN=BETV1J PE=1 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 6.272e-30
Identity = 71/162 (43.83%), Postives = 99/162 (61.11%), Query Frame = -3
Query:  154 MGVLTLNVEDTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHWVDALDKENKIYNYPAIEG--EGDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPNA 633
            MGV     E TS +P  +LFK F+L  D L PKV PQ + +VE I G+GGPG+IKK +F EG  +KY K  VD +D  N  Y+Y  IEG   GD    T++ +S E K+V TP+GGS   +  K++ K   E+K EQ+K   E  + + +A+E+Y LA+ +A
Sbjct:    1 MGVFNYETEATSVIPAARLFKAFILDGDNLFPKVAPQAISSVENIEGNGGPGTIKKISFPEGFPFKYVKDRVDEVDHTNFKYSYSVIEGGPVGD----TLEKISNEIKIVATPNGGSILKINNKYHTKGDHEVKAEQIKASKEMGETLLRAVESYLLAHSDA 158          
BLAST of FC876490 vs. ExPASy Swiss-Prot
Match: BEV1E_BETVE (Major pollen allergen Bet v 1-E OS=Betula verrucosa GN=BETV1E PE=1 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 6.272e-30
Identity = 71/162 (43.83%), Postives = 99/162 (61.11%), Query Frame = -3
Query:  154 MGVLTLNVEDTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHWVDALDKENKIYNYPAIEG--EGDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPNA 633
            MGV     E TS +P  +LFK F+L  D L PKV PQ + +VE I G+GGPG+IKK +F EG  +KY K  VD +D  N  Y+Y  IEG   GD    T++ +S E K+V TP+GGS   +  K++ K   E+K EQ+K   E  + + +A+E+Y LA+ +A
Sbjct:    1 MGVFNYETEATSVIPAARLFKAFILDGDNLFPKVAPQAISSVENIEGNGGPGTIKKISFPEGIPFKYVKGRVDEVDHTNFKYSYSVIEGGPVGD----TLEKISNEIKIVATPNGGSILKINNKYHTKGDHEVKAEQIKASKEMGETLLRAVESYLLAHSDA 158          
BLAST of FC876490 vs. ExPASy Swiss-Prot
Match: BEV1M_BETVE (Major pollen allergen Bet v 1-M/N OS=Betula verrucosa GN=BETV1M PE=1 SV=2)

HSP 1 Score: 130.568 bits (327), Expect = 8.192e-30
Identity = 70/160 (43.75%), Postives = 98/160 (61.25%), Query Frame = -3
Query:  154 MGVLTLNVEDTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHWVDALDKENKIYNYPAIEGEGDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPNA 633
            MGV     E TS +P  +LFK F+L  D L+PKV PQ + +VE I G+GGPG+IKK  F EG+ +KY K  VD +D  N  Y+Y  I  EG A   T++ +  E K+V TPDGGS   +  K++ K   E+K E +K   EK + + +A+E+Y LA+ +A
Sbjct:    1 MGVFNYESETTSVIPAARLFKAFILDGDNLIPKVAPQAISSVENIEGNGGPGTIKKITFPEGSPFKYVKERVDEVDHANFKYSYSMI--EGGALGDTLEKICNEIKIVATPDGGSILKISNKYHTKGDHEMKAEHMKAIKEKGEALLRAVESYLLAHSDA 158          
BLAST of FC876490 vs. ExPASy Swiss-Prot
Match: MPAC2_CARBE (Major pollen allergen Car b 1 isoform 2 OS=Carpinus betulus PE=1 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 1.183e-28
Identity = 68/159 (42.77%), Postives = 96/159 (60.38%), Query Frame = -3
Query:  163 MGVLTLNVEDTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHWVDALDKENKIYNYPAIEGE--GDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALAN 633
            MGV     E TS +P  +LFK F+L  + L+PKV PQ V +VE + G+GGPG+IKK  F EG+  KY K  V+ +D  N  YNY  IEG+  GD     ++ VS+E K+V  P GGS   +  KF+ K   E+  E++KG  E  + + +A+E+Y LA+
Sbjct:    1 MGVFNYEAETTSVIPAARLFKAFILDGNKLIPKVSPQAVSSVENVEGNGGPGTIKKITFSEGSPVKYVKERVEEIDHTNFKYNYTVIEGDVLGD----KLEKVSHELKIVAAPGGGSIVKISSKFHAKGYHEVNAEEMKGAKEMAEKLLRAVESYLLAH 155          
The following BLAST results are available for this feature:
BLAST of FC876490 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
BEV1B_BETVE7.409e-3144.38Major pollen allergen Bet v 1-B OS=Betula verrucos... [more]
BEV1C_BETVE9.677e-3144.38Major pollen allergen Bet v 1-C OS=Betula verrucos... [more]
BEV1K_BETVE1.264e-3044.38Major pollen allergen Bet v 1-K OS=Betula verrucos... [more]
ABR18_PEA1.651e-3042.77ABA-responsive protein ABR18 OS=Pisum sativum PE=2... [more]
BEV1F_BETVE2.816e-3043.83Major pollen allergen Bet v 1-F/I OS=Betula verruc... [more]
MPAG1_ALNGL4.803e-3045.68Major pollen allergen Aln g 1 OS=Alnus glutinosa P... [more]
BEV1J_BETVE6.272e-3043.83Major pollen allergen Bet v 1-J OS=Betula verrucos... [more]
BEV1E_BETVE6.272e-3043.83Major pollen allergen Bet v 1-E OS=Betula verrucos... [more]
BEV1M_BETVE8.192e-3043.75Major pollen allergen Bet v 1-M/N OS=Betula verruc... [more]
MPAC2_CARBE1.183e-2842.77Major pollen allergen Car b 1 isoform 2 OS=Carpinu... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN2CD05RM1 EHR Citrus clementina cDNA clone KN0AAN2CD05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876490 ID=FC876490; Name=FC876490; organism=Citrus clementina; type=EST; length=704bp
TTTTTTTTTTTTATTTAACCAAAAGCCAATTATATAAATTGGCATATTTG
AAAACAAAGAGACACGACATACGGAAGCCATAAACATGATTATTCATAAT
GTTGCAACAAAGGCGACGCAAGTGCGGTGAAGTGTTGACGTAAAAGCTTA
TACGGCATTGGGGTTTGCCAAGGCATAGGCTTCCAAAGCCTTAAAAATTC
CCTTCTCCTTTTCCAAGCCTCCCTTAACCTGCTCTTCCTTAATCTCGGCA
CCTGGTTTGGGATAAAACTTGATAACAACGGTGCTCTTGCTTCCTCCGTC
AGGGGTGCCCACAACCTTACTCTCATAAGAAACATGATCAATAGTAGGGA
TGTTAGCATCACCCTCACCTTCAATTGCCGGGTAATTGTATATCTTGTTC
TCTTTGTCCAAGGCATCAACCCAATGCTTAAAGTACTTCCAATCAGCACC
TTCAACAAAGTTAAACTTCTTGATGCTTCCAGGGCCTCCATCCCCTGAAA
TCAATTCAACGTTCTTTACAACCTGAGGCAGGACTTTGGGCAGAAGGGTG
TCGAACTGAAGGACAAAAAGTTTGAACAACTTTTCAGGGGGGAGAGTGCT
TGTATCCTCTACATTCAACGTGAGAACACCCATGATTGTCTAAGAGTTAA
ACAAAGAAAGAAGATGAAAACTACCGATCAACTAAAATTGGGAAATTTTG
GGGG
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