FC876495
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876495 vs. ExPASy Swiss-Prot
Match: VAMP7_CHICK (Vesicle-associated membrane protein 7 OS=Gallus gallus GN=VAMP7 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.461e-12 Identity = 39/101 (38.61%), Postives = 62/101 (61.39%), Query Frame = -2 Query: 447 FQGKAATAVANSLNKEFGSKLKEHMQYCVDHPEE--ISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTKMRRKMWIQNM 743 + +A TA+ ++N EF S L ++Y H E ++A+ +AQV E+KG+M+ NI+ V RGEK+ELL+DKTENL + F+ + R M ++N+ Sbjct: 90 YGSRAQTALPYAMNSEFSSVLAAQLKY---HSESKGTDQVAETQAQVDELKGIMVRNIDLVAQRGEKLELLIDKTENLVDSSVTFKTTSRNLARAMCMKNL 187
BLAST of FC876495 vs. ExPASy Swiss-Prot
Match: VA712_ARATH (Vesicle-associated membrane protein 712 OS=Arabidopsis thaliana GN=VAMP712 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.908e-12 Identity = 36/117 (30.77%), Postives = 63/117 (53.85%), Query Frame = -2 Query: 375 TAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTKMRRKMWIQNMXXXXXXXXXXXXXXXXXXLSVCHG 725 +A A ++N EF L + ++Y + P ++++K ++++V+ VM+ENI+ +LDRGE++ELLVDKT N++ FR+Q + +W +N CHG Sbjct: 97 SAQAYAMNDEFSRVLNQQIEYYSNDPNA-DTISRIKGEMNQVRDVMIENIDNILDRGERLELLVDKTANMQGNTFRFRKQTRRFNNTVWWRNCKLTLLLILVLLVIIYIGVAFACHG 212
BLAST of FC876495 vs. ExPASy Swiss-Prot
Match: VAMP7_RAT (Vesicle-associated membrane protein 7 OS=Rattus norvegicus GN=Vamp7 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.251e-12 Identity = 34/99 (34.34%), Postives = 63/99 (63.64%), Query Frame = -2 Query: 447 FQGKAATAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTKMRRKMWIQNM 743 + +A TA+ ++N EF S L +++ ++ + + ++ + +AQV E+KG+M+ NI+ V RGE++ELL+DKTENL + F+ + R M ++N+ Sbjct: 90 YGSRAQTALPYAMNSEFSSVLAAQLKHHSEN-QSLDRVTETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCVKNV 187
BLAST of FC876495 vs. ExPASy Swiss-Prot
Match: VAMP7_MOUSE (Vesicle-associated membrane protein 7 OS=Mus musculus GN=Vamp7 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.551e-12 Identity = 35/99 (35.35%), Postives = 63/99 (63.64%), Query Frame = -2 Query: 447 FQGKAATAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTKMRRKMWIQNM 743 + +A TA+ ++N EF S L +++ ++ + + K+ + +AQV E+KG+M+ NI+ V RGE++ELL+DKTENL + F+ + R M ++N+ Sbjct: 90 YGSRAQTALPYAMNSEFSSVLAAQLKHHSEN-KSLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCMKNI 187
BLAST of FC876495 vs. ExPASy Swiss-Prot
Match: VAMP7_PONAB (Vesicle-associated membrane protein 7 OS=Pongo abelii GN=VAMP7 PE=2 SV=3) HSP 1 Score: 71.2478 bits (173), Expect = 7.250e-12 Identity = 35/99 (35.35%), Postives = 63/99 (63.64%), Query Frame = -2 Query: 447 FQGKAATAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTKMRRKMWIQNM 743 + +A TA+ ++N EF S L +++ ++ + + K+ + +AQV E+KG+M+ NI+ V RGE++ELL+DKTENL + F+ + R M ++N+ Sbjct: 90 YGSRAQTALPYAMNSEFSSVLAAQLKHHSEN-KGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCMKNL 187
BLAST of FC876495 vs. ExPASy Swiss-Prot
Match: VAMP7_HUMAN (Vesicle-associated membrane protein 7 OS=Homo sapiens GN=VAMP7 PE=1 SV=3) HSP 1 Score: 71.2478 bits (173), Expect = 7.250e-12 Identity = 35/99 (35.35%), Postives = 63/99 (63.64%), Query Frame = -2 Query: 447 FQGKAATAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTKMRRKMWIQNM 743 + +A TA+ ++N EF S L +++ ++ + + K+ + +AQV E+KG+M+ NI+ V RGE++ELL+DKTENL + F+ + R M ++N+ Sbjct: 90 YGSRAQTALPYAMNSEFSSVLAAQLKHHSEN-KGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCMKNL 187
BLAST of FC876495 vs. ExPASy Swiss-Prot
Match: VAMP7_BOVIN (Vesicle-associated membrane protein 7 OS=Bos taurus GN=VAMP7 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.250e-12 Identity = 35/99 (35.35%), Postives = 63/99 (63.64%), Query Frame = -2 Query: 447 FQGKAATAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTKMRRKMWIQNM 743 + +A TA+ ++N EF S L +++ ++ + + K+ + +AQV E+KG+M+ NI+ V RGE++ELL+DKTENL + F+ + R M ++N+ Sbjct: 90 YGSRAQTALPYAMNSEFSSVLAAQLKHHSEN-KGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCMKNL 187
BLAST of FC876495 vs. ExPASy Swiss-Prot
Match: VAM7A_DICDI (Vesicle-associated membrane protein 7A OS=Dictyostelium discoideum GN=vamp7A PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 8.016e-11 Identity = 35/78 (44.87%), Postives = 53/78 (67.95%), Query Frame = -2 Query: 450 LKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTKMRRKMWIQN 683 L+E M+Y +P+ +K+ V QVSE KG + + IEK + RGEKIE++VDKTE L+S++ F+ ++RK+W QN Sbjct: 112 LEERMKY-YSNPKS-NKMNLVMDQVSEAKGALTDAIEKTIHRGEKIEIIVDKTERLQSESFVFKSNSVALKRKLWWQN 187 The following BLAST results are available for this feature:
BLAST of FC876495 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876495 ID=FC876495; Name=FC876495; organism=Citrus clementina; type=EST; length=798bpback to top |