FC876496
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876496 vs. ExPASy Swiss-Prot
Match: VAM7B_DICDI (Vesicle-associated membrane protein 7B OS=Dictyostelium discoideum GN=vamp7B PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.239e-32 Identity = 73/201 (36.32%), Postives = 124/201 (61.69%), Query Frame = 2 Query: 74 LIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENI-EKVLDRGEKIELLVDKTENLRSQAQDFRQQGTKMRRKMWIQNMKIKLIVLGIIIAL 673 +IYS VARG+ +LAE+T GNF +I + L +P + K +Y + + F+YLV + TY +A E GR+IP FL+ VK F Y G K TA+A +N +F L+ M + + + +++ A++ EVK +++ +I ++L RGEKIE+LV++T+ L Q+ F++Q +++ MW +N+K+ ++VLG I+ + Sbjct: 3 IIYSLVARGSSVLAEFTSTNGNFVTITRRILDLIPPNDTKMSYVYEKYIFHYLVSDTLTYLCMADEEFGRRIPFTFLDDVKNRFKSMY-GDKGKTAIAYGMNSDFSRTLENLMDH-YSNTTRVDTMSRTMAEIDEVKNILVSDIAPQLLKRGEKIEMLVERTDTLNQQSFKFKKQSKQLKCAMWWKNVKL-MLVLGAIVLI 200
BLAST of FC876496 vs. ExPASy Swiss-Prot
Match: VA712_ARATH (Vesicle-associated membrane protein 712 OS=Arabidopsis thaliana GN=VAMP712 PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.113e-32 Identity = 71/202 (35.15%), Postives = 128/202 (63.37%), Query Frame = 2 Query: 71 SLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKF-TYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTKMRRKMWIQNMKIKLIVLGIIIAL 673 S++Y+ VARGTV+LAE + + N ++IA Q L+K+P + +Y+ D + F+ +G T +A E AGR+IP +FLE + + F + YG +A A ++N EF L + ++Y + P ++++K ++++V+ VM+ENI+ +LDRGE++ELLVDKT N++ FR+Q + +W +N K+ L+++ +++ + Sbjct: 2 SILYALVARGTVVLAELSTTSTNASTIAKQILEKIPGNGDSHVSYSQDRYVFHVKRTDGLTVLCMADEDAGRRIPFSFLEDIHQRFVRTYGRA-IHSAQAYAMNDEFSRVLNQQIEYYSNDPNA-DTISRIKGEMNQVRDVMIENIDNILDRGERLELLVDKTANMQGNTFRFRKQTRRFNNTVWWRNCKLTLLLILVLLVI 201
BLAST of FC876496 vs. ExPASy Swiss-Prot
Match: VAMP7_CHICK (Vesicle-associated membrane protein 7 OS=Gallus gallus GN=VAMP7 PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.148e-32 Identity = 72/203 (35.47%), Postives = 120/203 (59.11%), Query Frame = 2 Query: 71 SLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDHPEE--ISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTKMRRKMWIQNMKIKLIVLGIIIAL 673 +++++ VARGT ILA++ GNF + Q L K+P+ NNK TY+ + F+Y+ ++ Y + + R FL +K+ F YG +A TA+ ++N EF S L ++Y H E ++A+ +AQV E+KG+M+ NI+ V RGEK+ELL+DKTENL + F+ + R M ++N+K+ +I++ + I + Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIIYLCITDDDFERSRAFNFLNEIKKRFQTTYGS-RAQTALPYAMNSEFSSVLAAQLKY---HSESKGTDQVAETQAQVDELKGIMVRNIDLVAQRGEKLELLIDKTENLVDSSVTFKTTSRNLARAMCMKNLKLTIIIIIVSIVI 200
BLAST of FC876496 vs. ExPASy Swiss-Prot
Match: VAMP7_MOUSE (Vesicle-associated membrane protein 7 OS=Mus musculus GN=Vamp7 PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.049e-31 Identity = 69/199 (34.67%), Postives = 121/199 (60.80%), Query Frame = 2 Query: 71 SLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTKMRRKMWIQNMKIKLIVLGIII 667 +++++ VARGT ILA++ GNF + Q L K+P+ NNK TY+ + F+Y+ ++ Y + + R +FL VK+ F Y G +A TA+ ++N EF S L +++ ++ + + K+ + +AQV E+KG+M+ NI+ V RGE++ELL+DKTENL + F+ + R M ++N+K+ +I++ + I Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFSFLNEVKKRFQTTY-GSRAQTALPYAMNSEFSSVLAAQLKHHSEN-KSLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCMKNIKLTIIIIIVSI 198
BLAST of FC876496 vs. ExPASy Swiss-Prot
Match: VAMP7_RAT (Vesicle-associated membrane protein 7 OS=Rattus norvegicus GN=Vamp7 PE=1 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.336e-31 Identity = 68/199 (34.17%), Postives = 119/199 (59.80%), Query Frame = 2 Query: 71 SLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTKMRRKMWIQNMKIKLIVLGIII 667 +++++ VARGT ILA++ GNF + Q L K+P+ NNK TY+ + F+Y+ ++ Y + + R FL VK+ F Y G +A TA+ ++N EF S L +++ ++ + + ++ + +AQV E+KG+M+ NI+ V RGE++ELL+DKTENL + F+ + R M ++N+K+ I++ + I Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFGFLNEVKKRFQTTY-GSRAQTALPYAMNSEFSSVLAAQLKHHSEN-QSLDRVTETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCVKNVKLTAIIVVVSI 198
BLAST of FC876496 vs. ExPASy Swiss-Prot
Match: VAMP7_HUMAN (Vesicle-associated membrane protein 7 OS=Homo sapiens GN=VAMP7 PE=1 SV=3) HSP 1 Score: 134.806 bits (338), Expect = 3.985e-31 Identity = 68/199 (34.17%), Postives = 120/199 (60.30%), Query Frame = 2 Query: 71 SLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTKMRRKMWIQNMKIKLIVLGIII 667 +++++ VARGT ILA++ GNF + Q L K+P+ NNK TY+ + F+Y+ ++ Y + + R FL +K+ F YG +A TA+ ++N EF S L +++ ++ + + K+ + +AQV E+KG+M+ NI+ V RGE++ELL+DKTENL + F+ + R M ++N+K+ +I++ + I Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFNFLNEIKKRFQTTYGS-RAQTALPYAMNSEFSSVLAAQLKHHSEN-KGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCMKNLKLTIIIIIVSI 198
BLAST of FC876496 vs. ExPASy Swiss-Prot
Match: VAMP7_BOVIN (Vesicle-associated membrane protein 7 OS=Bos taurus GN=VAMP7 PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 3.985e-31 Identity = 68/199 (34.17%), Postives = 120/199 (60.30%), Query Frame = 2 Query: 71 SLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTKMRRKMWIQNMKIKLIVLGIII 667 +++++ VARGT ILA++ GNF + Q L K+P+ NNK TY+ + F+Y+ ++ Y + + R FL +K+ F YG +A TA+ ++N EF S L +++ ++ + + K+ + +AQV E+KG+M+ NI+ V RGE++ELL+DKTENL + F+ + R M ++N+K+ +I++ I + Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFNFLNEIKKRFQTTYGS-RAQTALPYAMNSEFSSVLAAQLKHHSEN-KGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCMKNLKLTIIIIIISV 198
BLAST of FC876496 vs. ExPASy Swiss-Prot
Match: VAMP7_PONAB (Vesicle-associated membrane protein 7 OS=Pongo abelii GN=VAMP7 PE=2 SV=3) HSP 1 Score: 133.65 bits (335), Expect = 8.877e-31 Identity = 68/199 (34.17%), Postives = 119/199 (59.80%), Query Frame = 2 Query: 71 SLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTKMRRKMWIQNMKIKLIVLGIII 667 +++++ VARGT ILA++ GNF + Q L K+P+ NNK TY + F+Y+ ++ Y + + R FL +K+ F YG +A TA+ ++N EF S L +++ ++ + + K+ + +AQV E+KG+M+ NI+ V RGE++ELL+DKTENL + F+ + R M ++N+K+ +I++ + I Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYPHGNYLFHYICQDRIVYLCITDDDFERSRAFNFLNEIKKRFQTTYGS-RAQTALPYAMNSEFSSVLAAQLKHHSEN-KGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCMKNLKLTIIIIIVSI 198
BLAST of FC876496 vs. ExPASy Swiss-Prot
Match: VAM7A_DICDI (Vesicle-associated membrane protein 7A OS=Dictyostelium discoideum GN=vamp7A PE=1 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 7.034e-28 Identity = 70/205 (34.15%), Postives = 117/205 (57.07%), Query Frame = 2 Query: 59 MGQQSLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTKMRRKMWIQNMKIKLIVLGIIIAL 673 M Q ++Y+ V+ V L E+ GNF +A + + K+P T+ K Y + H F+Y+ EN + + E G QIP FL +++ F + YG + + + + F L+E M+Y +P+ +K+ V QVSE KG + + IEK + RGEKIE++VDKTE L+S++ F+ ++RK+W QN K+ I +G+++ + Sbjct: 1 MSQTDILYACVSYKGVCLVEHKIANGNFIDLARRLITKIPPTSKKI-YTSENHNFHYISENDLAFLCLCHEKLGVQIPSEFLSDIRQQFIRSYGQSFSQNSPTATYDP-FIRVLEERMKY-YSNPKS-NKMNLVMDQVSEAKGALTDAIEKTIHRGEKIEIIVDKTERLQSESFVFKSNSVALKRKLWWQNKKL-AIAIGLVVCI 200
BLAST of FC876496 vs. ExPASy Swiss-Prot
Match: SYB1_SCHPO (Synaptobrevin homolog 1 OS=Schizosaccharomyces pombe GN=syb1 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.894e-13 Identity = 35/77 (45.45%), Postives = 56/77 (72.73%), Query Frame = 2 Query: 446 KLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTKMRRKMWIQNMKIKL-IVLGIIIAL 673 K A ++ Q+ + G+M ENI KV +RGE+++ L DKT+NL AQ FR+ ++R+KMW ++M+++L I++GIII L Sbjct: 31 KTAAIQQQIDDTVGIMRENISKVSERGERLDSLQDKTDNLAVSAQGFRRGANRVRKKMWWKDMRMRLCIIIGIIILL 107 The following BLAST results are available for this feature:
BLAST of FC876496 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876496 ID=FC876496; Name=FC876496; organism=Citrus clementina; type=EST; length=675bpback to top |