FC876497

Overview
NameFC876497
Unique NameFC876497
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length871
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876497 vs. ExPASy Swiss-Prot
Match: STP13_ARATH (Sugar transport protein 13 OS=Arabidopsis thaliana GN=STP13 PE=1 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 8.093e-15
Identity = 61/249 (24.50%), Postives = 105/249 (42.17%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF---IXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTV 759
            WR  LG++ +PA++  V  L + E+P  L  +   ++   VL +I     +E E   L  A+      K   R L     +  R                 IN +M+Y+P +    GF S+             N + T+V IY +D  GR+ L L +   +  S V+++      +          +  + V+ +  Y+A FA   GP+ W + SE +P + R     ++  VN +   I+AQ FL++
Sbjct:  202 WRLSLGLAGIPALLLTVGALLVTETPNSLVERGRLDEGKAVLRRIRGTDNVEPEFADLLEASRLAKEVKHPFRNL---LQRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFSTLGFGSDASLYSAVVTG-AVNVLSTLVSIYSVDKVGRRVLLLEAGVQMFFSQVVIAIILGVKVTDTSTNLSKGFAILVVVMICTYVAAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFIIAQAFLSM 446          
BLAST of FC876497 vs. ExPASy Swiss-Prot
Match: GTR5_HUMAN (Solute carrier family 2, facilitated glucose transporter member 5 OS=Homo sapiens GN=SLC2A5 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.057e-14
Identity = 60/254 (23.62%), Postives = 109/254 (42.91%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDV---FKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVG 774
            W  +LG++ VPA +Q +L+ F PESPR+L ++   E A     K     R  D +D   A   +E   +K   ++ V   F+ + +R                 +N + YY+  I   AG    +            N V T   +++++  GR+ L L   +  +I+  +L+ A              +I+++ +  Y+   A G  P+P  L +E++ +  R     +  +V+W+SN  V   F  + E +G
Sbjct:  192 WPILLGLTGVPAALQLLLLPFFPESPRYLLIQKKDEAA---AKKALQTLRGWDSVDREVAEIRQEDEAEKAAGFISVLKLFRMRSLRWQLLSIIVLMGGQQLSGVNAIYYYADQIYLSAGV-PEEHVQYVTAGTGAVNVVMTFCAVFVVELLGRRLLLLLGFSICLIACCVLTAALALQDTVSWMP---YISIVCVISYVIGHALGPSPIPALLITEIFLQSSRPSAFMVGGSVHWLSNFTVGLIFPFIQEGLG 438          
BLAST of FC876497 vs. ExPASy Swiss-Prot
Match: GLF_ZYMMO (Glucose facilitated diffusion protein OS=Zymomonas mobilis GN=glf PE=3 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.803e-14
Identity = 58/243 (23.87%), Postives = 101/243 (41.56%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLD----VFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIV 738
            W W      +  I   +L+L  P++P WL MK    +A  +L+++   A     I  + A  ++ + K     +      VF    +                  IN V+YY+P + Q  GF ++             N + T++   ++D FGRK L +    G+   + +L   F          V G + +  + LYIA F    GPV W + SE++P   +G    ++ T  W++N++V
Sbjct:  189 WCWSPASEGLIGIAFLLLLLTAPDTPHWLVMKGRHSEASKILARLEPQADPNLTIQKIKAGFDKAMDKSSAGLFAFGITVVFAGVSVAAFQQLVG----------INAVLYYAPQMFQNLGFGADTALLQTISIGV-VNFIFTMIASRVVDRFGRKPLLIWGALGMAAMMAVLGCCF-------WFKVGGVLPLASVLLYIAVFGMSWGPVCWVVLSEMFPSSIKGAAMPIAVTGQWLANILV 413          
BLAST of FC876497 vs. ExPASy Swiss-Prot
Match: STP4_ARATH (Sugar transport protein 4 OS=Arabidopsis thaliana GN=STP4 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.355e-14
Identity = 60/250 (24.00%), Postives = 107/250 (42.80%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLV----LLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTV 759
            WR  LG++ VPA++  +  L +P++P  L  +   E+A  +L  I     +++E   L  A+EE  + K   + + +      R                 IN + +Y+P + Q  GF S                + T V ++ +D FGR+ L L     +++S +    ++   F              + V  + +Y+A FA   GP+ W + SE+ P + R     ++ +VN     +VAQ FLT+
Sbjct:  200 WRISLGLACVPAVMIMIGALILPDTPNSLIERGYTEEAKEMLQSIRGTNEVDEEFQDLIDASEESKQVKHPWKNIML---PRYRPQLIMTCFIPFFQQLTGINVITFYAPVLFQTLGFGSKASLLSAMVTGI-IELLCTFVSVFTVDRFGRRILFLQGGIQMLVSQIAIGAMIGVKFGVAGTGNIGKSDANLIVALICIYVAGFAWSWGPLGWLVPSEISPLEIRSAAQAINVSVNMFFTFLVAQLFLTM 445          
BLAST of FC876497 vs. ExPASy Swiss-Prot
Match: GTR7_MOUSE (Solute carrier family 2, facilitated glucose transporter member 7 OS=Mus musculus GN=Slc2a7 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.355e-14
Identity = 66/258 (25.58%), Postives = 113/258 (43.80%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIQFVLMLFMPESPRW-LFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKT------VRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVG 774
            W  +L ++ VPA+IQ + + F PESPR+ L  K D+E A   L       RL  +  ++ A  EE   +++T      +  L++F  + +R                 IN V YY+  I   AG    Q            N V T+V   +I+  GR+ L LS  A    + ++L+ A +            +++++ +  YI   + G  PVP  + +E+  +  R     +   V+W++N IV  TF ++   +G
Sbjct:  198 WPILLALTGVPAVIQLLSLPFFPESPRYTLIEKGDEETARQALR------RLRGQNYNVEAEMEEMRTEERTEQAEGRLSVLNLFTFRPLRWQLISIVVLMAGQQLSGINAVNYYADVIYTSAGVDPTQSQYVTLGSGV-INLVMTLVSAVIIERLGRRILLLSGYAICCSACLVLTVALLLQSTAPEL---SYLSIVCVFSYIVGHSIGPSPVPSVVRTEIVLQSSRTAAFTVDGAVHWLTNFIVGLTFPSIQVAIG 445          
BLAST of FC876497 vs. ExPASy Swiss-Prot
Match: RCO3_NEUCR (Probable glucose transporter rco-3 OS=Neurospora crassa GN=rco-3 PE=3 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 3.075e-14
Identity = 61/245 (24.90%), Postives = 106/245 (43.27%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKI--YDIAR--LEDEIDHLSAAAEEELRKKKTVRYLDV-FKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVA 741
            +R  +G+    A +  + +  +PE+PR+L  + DK  A L LS++   DI    L +E+  + A  + E+       Y D+ F    +                  +N +MYY  T    AG  +              N   TI G+++++ +GR++L +    G+ I  +L++ AF              + +  +A+YI FFA   GPV W + SE+YP + R     ++   NW  N  +A
Sbjct:  192 YRVPIGLQLTWACVLALGLTVLPETPRYLIKRGDKNAAALSLSRLRRLDITHPALVEELAEIEANHQYEMALGPD-SYKDILFGEPHLGRRTFTGCCLQMLQQLTGVNFIMYYGTTFFNNAGVGN---PFKISLIMQVINTASTIPGLFVVESWGRRRLLMVGAIGMAICQLLIA-AFATASGSNNLSAQNKVLITFVAIYIFFFAASWGPVVWVVTSEIYPLKVRAKSMSITTASNWFLNFGIA 431          
BLAST of FC876497 vs. ExPASy Swiss-Prot
Match: QAY_NEUAF (Quinate permease OS=Neurospora africana GN=qa-y PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.075e-14
Identity = 61/255 (23.92%), Postives = 105/255 (41.18%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLE----DEIDHLSAAAEEELRK--KKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGI-YLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVY-------GWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQ 744
            W     V  +PA + F+   ++PESPRWLF    +E+AI VL  I ++   +    +EI ++ A  +   R+  K   +     K  ++R                 IN + YYSPT+ +  G                   V TI+ + +L+D  GR+++      G  + +  +  A+I                  G  A+    L+ AF+ P     PW +NSE++ +  R +    +A  NW  N I+++
Sbjct:  194 WLIPFAVQLIPAGLLFLGSFWIPESPRWLFANGRREEAIKVLCWIRNLEPTDRYIVEEISYIDADLQRYAREVGKGFWKPFLSLKQPKVRWRFFLGGMLFLWQNGSGINAINYYSPTVFRSIGITGTNTGFLTTGIFGVVKMVLTIIWLLWLVDLVGRRRILFVGATGGSLCMWFIG-AYIKIAGPGTTKTEEAKLTSGGIAAIFFFYLWTAFYTPSWNGTPWVINSEMFDQNTRSLGQASAAANNWFWNFIISR 447          
BLAST of FC876497 vs. ExPASy Swiss-Prot
Match: HEX6_RICCO (Hexose carrier protein HEX6 OS=Ricinus communis GN=HEX6 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.075e-14
Identity = 59/252 (23.41%), Postives = 116/252 (46.03%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKS-DKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKS---KEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLS--WAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTV 759
            WR  L ++AVPA I     LF+PE+P  L  +S D E+A L+L ++     ++ E+D L  A+       +T+++   FK+   ++ R                 IN + +Y+P + +  G + +              +  T + + ++D  GR+ L +     + ++ +++    A            Y +I +I + +Y+A F    GP+ W + SE++P + R     +   V+++   +VAQTFL++
Sbjct:  200 WRISLAMAAVPAAILTFGALFLPETPNSLIQRSNDHERAKLMLQRVRGTTDVQAELDDLIKASIIS----RTIQH--PFKNIMRRKYRPQLVMAVAIPFFQQVTGINVIAFYAPILFRTIGLEESASLLSSIVTGL-VGSASTFISMLIVDKLGRRALFIFGGVQMFVAQIMVGSIMAAELGDHGGIGKGYAYIVLILICIYVAGFGWSWGPLGWLVPSEIFPLEIRSAGQSIVVAVSFLFTFVVAQTFLSM 444          
BLAST of FC876497 vs. ExPASy Swiss-Prot
Match: ERDL2_ARATH (Sugar transporter ERD6-like 2 OS=Arabidopsis thaliana GN=SUGTL3 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.017e-14
Identity = 61/254 (24.02%), Postives = 104/254 (40.94%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAE-----EELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVG------TIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTF 750
            WR +  +SA+P+  Q + + F+PESPRWL M    ++  + L K+       +  D L  AAE     E  RK+      D+F                          +  Y+  I   AGF S+           GT  +       +IV +  +D +GR+ L + S  G+ I    +  ++          +   + ++GL  Y++ F  G+G +PW + SE++P   +   G +    NW  N I+  +F
Sbjct:  176 WRTLALLSAIPSAFQVICLFFIPESPRWLAMYGQDQELEVSLKKLRG-----ENSDILKEAAEIRETVEISRKESQSGIRDLFHIGNAHSLIIGLGLMLLQQFCGSA-AISAYAARIFDKAGFPSD----------IGTTILAVILIPQSIVVMLTVDRWGRRPLLMISSIGMCICSFFIGLSYYLQKNGEFQKLCSVMLIVGLVGYVSSFGIGLGGLPWVIMSEIFPVNVKITAGSLVTMSNWFFNWIIIYSF 413          
BLAST of FC876497 vs. ExPASy Swiss-Prot
Match: PLST2_ARATH (Probable plastidic glucose transporter 2 OS=Arabidopsis thaliana GN=At1g67300 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.246e-14
Identity = 60/255 (23.53%), Postives = 107/255 (41.96%), Query Frame = 1
Query:   10 VPGTWRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVG 774
            + G WR    +S +PA +  + M    ESP+WLF +    +A     ++   + ++  +  L     ++  +   V   ++   +  R                 IN V Y+S T+ + AG  S+            +N +G+++ + L+D  GRK L L S  G+  ++ L   A               ++V G  +++  FA G GPVP  L  E++P + R        +V+W+ N  V   FL + E +G
Sbjct:  205 ITGWWRVCFWLSTIPAALLALGMFLCAESPQWLFKQGKIAEAEAEFERLLGGSHVKTAMAELYKLDLDKTDEPDVVSLSELLYGRHSRVVFIGSTLFALQQLSG-INAVFYFSSTVFKSAGVPSDLGNIFVGV----SNLLGSVIAMVLMDKVGRKLLLLWSFIGMAAAMALQVGATSSYLPHFSALC---LSVGGTLVFVLTFALGAGPVPGLLLPEIFPSRIRAKAMAFCMSVHWVINFFVGLLFLRLLEKLG 451          
The following BLAST results are available for this feature:
BLAST of FC876497 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 132
Match NameE-valueIdentityDescription
STP13_ARATH8.093e-1524.50Sugar transport protein 13 OS=Arabidopsis thaliana... [more]
GTR5_HUMAN1.057e-1423.62Solute carrier family 2, facilitated glucose trans... [more]
GLF_ZYMMO1.803e-1423.87Glucose facilitated diffusion protein OS=Zymomonas... [more]
STP4_ARATH2.355e-1424.00Sugar transport protein 4 OS=Arabidopsis thaliana ... [more]
GTR7_MOUSE2.355e-1425.58Solute carrier family 2, facilitated glucose trans... [more]
RCO3_NEUCR3.075e-1424.90Probable glucose transporter rco-3 OS=Neurospora c... [more]
QAY_NEUAF3.075e-1423.92Quinate permease OS=Neurospora africana GN=qa-y PE... [more]
HEX6_RICCO3.075e-1423.41Hexose carrier protein HEX6 OS=Ricinus communis GN... [more]
ERDL2_ARATH4.017e-1424.02Sugar transporter ERD6-like 2 OS=Arabidopsis thali... [more]
PLST2_ARATH5.246e-1423.53Probable plastidic glucose transporter 2 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN2CE02RM1 EHR Citrus clementina cDNA clone KN0AAN2CE02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876497 ID=FC876497; Name=FC876497; organism=Citrus clementina; type=EST; length=871bp
GCACGAGGGGTCCCTGGAACATGGAGATGGATGCTTGGAGTATCAGCTGT
GCCAGCTATCATTCAGTTTGTCTTAATGCTTTTTATGCCGGAGTCTCCTA
GATGGCTTTTCATGAAGAGTGACAAAGAAAAAGCCATTTTGGTTCTTTCT
AAGATTTATGACATTGCTCGGTTAGAAGATGAAATTGATCACCTTTCAGC
TGCTGCAGAGGAAGAACTCCGAAAAAAGAAAACTGTCAGATACTTGGATG
TTTTTAAATCCAAAGAAATCAGACTTGCATTTCTGGCTGGGGCTGGACTT
CAGGCATTTCAGCAGTTCACTGGTATCAACACAGTCATGTACTACAGCCC
GACAATTGTCCAAATGGCTGGCTTCCAGTCCAACCAGCTAGCGCTTCTCC
TATCTCTTGCTGTTGCTGGTACAAATGCAGTTGGCACAATTGTTGGAATT
TATCTTATTGACCATTTTGGAAGGAAAAAGTTGGCCCTCTCTAGCTTAGC
TGGTGTTATTATATCCCTCGTCTTACTCTCTTGGGCATTCATCAGTGGAT
CATCTGCTTCTTCAAGTGGAGTCTATGGTTGGATTGCAGTCATCGGGTTA
GCCCTATATATTGCTTTCTTTGCACCTGGAATGGGACCTGTGCCATGGAC
TCTGAACTCTGAGGTGTATCCTGAGCAATACCGTGGAATTTGTGGAGGTA
TGTCAGCTACTGTGAACTGGATCTCAAATTTGATCGTGGCCCAAACCTTC
CTGACGGTTGCTGAACTAGTGGGCACTGGAGCCACTTTCTTGATTCTTGC
TGGCCTTGCTGTACTTGCAGTTGTGTTTGTGATTCTGTTTGTGCCAAAAA
CTCAGGGACTGACATTTTTGG
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