FC876497

Overview
NameFC876497
Unique NameFC876497
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length871
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10428 contig Ccv1_Contig10428:2..872. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876497 vs. ExPASy Swiss-Prot
Match: PLT2_ARATH (Putative polyol transporter 2 OS=Arabidopsis thaliana GN=PLT2 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.007e-22
Identity = 78/298 (26.17%), Postives = 127/298 (42.62%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVL-----------SKIYDIARL----EDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGW---IAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATXXXXXXXXXXXXXXXXXXXPKTQGL 861
            WR+MLG+ AVP++   + +L MPESPRWL M+     A  VL           S++ DI R     +D  D +     ++   K   + L V  +  +R                 I+ V+ YSPTI   AG +S                +  +VG  L+D FGR+ L L+S+ G+  SL  L  + +            W   +AV  +  ++A F+ G GPV W   SE++P + R     +   +N + + I+  TFL++++ +  G                     P+T+G+
Sbjct:  184 WRFMLGIGAVPSVFLAIGVLAMPESPRWLVMQGRLGDAFKVLDKTSNTKEEAISRLNDIKRAVGIPDDMTDDVIVVPNKKSAGKGVWKDLLVRPTPSVRHILIACLGIHFSQQASGIDAVVLYSPTIFSRAGLKSKNDQLLATVAVGVVKTLFIVVGTCLVDRFGRRALLLTSMGGMFFSLTALGTS-LTVIDRNPGQTLKWAIGLAVTTVMTFVATFSLGAGPVTWVYASEIFPVRLRAQGASLGVMLNRLMSGIIGMTFLSLSKGLTIGGAFLLFAGVAVAAWVFFFTFLPETRGV 480          
BLAST of FC876497 vs. ExPASy Swiss-Prot
Match: ERDL7_ARATH (Sugar transporter ERD6-like 7 OS=Arabidopsis thaliana GN=At2g48020 PE=2 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 4.007e-22
Identity = 72/249 (28.92%), Postives = 117/249 (46.99%), Query Frame = 1
Query:   19 TWRWMLGVSAVPAIIQFVLMLFMPESPRWLFM---KSDKEKAILVL-SKIYDIARLEDEI-DHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTF 750
            TWR +  +  +P    F+ + F+PESPRWL      ++ E A+  L  K  DI+    EI D++     E L +    + LD+F+ + IR                 IN + +Y+ +I + AGF +                V T +   ++D  GRK L L S  G++I  ++ + +F              +AV+G+ +YI  F+ GMG +PW + SE++P   +G+ GGM+  VNW     V+ TF
Sbjct:  178 TWRVLALIGIIPCAASFLGLFFIPESPRWLAKVGRDTEFEAALRKLRGKKADISEEAAEIQDYI-----ETLERLPKAKMLDLFQRRYIRSVLIAFGLMVFQQFGG-INGICFYTSSIFEQAGFPTRLGMIIYAVL----QVVITALNAPIVDRAGRKPLLLVSATGLVIGCLIAAVSFYLKVHDMAHEAVPVLAVVGIMVYIGSFSAGMGAMPWVVMSEIFPINIKGVAGGMATLVNWFGAWAVSYTF 416          
BLAST of FC876497 vs. ExPASy Swiss-Prot
Match: ITR2_SCHPO (Myo-inositol transporter 2 OS=Schizosaccharomyces pombe GN=itr2 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.835e-22
Identity = 71/262 (27.10%), Postives = 125/262 (47.71%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKK--KTVRYLDVFKSKEI-------RXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVY-GW--IAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELV 771
            WR M G+ A PA+ Q + + + PESPR+L   +  EK   +LS+I+  A+   EI +  +  +E ++    +  ++   F S ++       R                  N + Y+S  I Q  GF+++            TN V TIV    ID  GR+++ L + A +I  L L + A+             GW  + +  + +++A +A G+G +PW   +E++P + R +  G S  +NW+ NLI++ +FLT+ E +
Sbjct:  239 WRIMFGIGAAPALGQLISLFWTPESPRYLLRHNHVEKVYKILSRIHPEAK-PAEIAYKVSLIQEGVKVDFPEGNKFQHFFHSLKVLFTVPSNRRSLFIGCFLQWFQQFSGTNAIQYFSAIIFQSVGFKNS---ISVSIVVGATNFVFTIVAFMFIDRIGRRRILLCTSAVMIAGLALCAIAYHFLPADTTQNTNSGWQYVVLASIIIFLASYASGIGNIPWQ-QAELFPMEVRALGAGFSTAINWVGNLIISASFLTMMESI 495          
BLAST of FC876497 vs. ExPASy Swiss-Prot
Match: GTR3_SHEEP (Solute carrier family 2, facilitated glucose transporter member 3 OS=Ovis aries GN=SLC2A3 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.835e-22
Identity = 70/262 (26.72%), Postives = 123/262 (46.95%), Query Frame = 1
Query:    7 GVPGTWRWMLGVSAVPAIIQFVLMLFMPESPRWLFM-KSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELR--KKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVI---GLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVG 774
            G    W  +LG + +PAIIQ   + F PESPR+L + + ++EKA  +L +++     ED    +    +E +R  ++K V  L++F++   R                 IN V YYS  I + AG Q               N + T+V ++L++  GR+ L L  L G+    +L++ + +          Y W++ I    + +++AFF  G GP+PW + +E++ +  R     ++   NW SN +V   F +    +G
Sbjct:  179 GTEDLWPLLLGFTILPAIIQCAALPFCPESPRFLLINRKEEEKAKEILQRLWGT---EDVAQDIQEMKDESMRMSQEKQVTVLELFRAPNYRQPIIISIMLQLSQQLSGINAVFYYSTGIFKDAGVQEPVYATIGAGV---VNTIFTVVSVFLVERAGRRTLHLIGLGGMAFCSILMTISLLLKDN------YSWMSFICIGAILVFVAFFEIGPGPIPWFIVAELFGQGPRPAAMAVAGCSNWTSNFLVGLLFPSATFYLG 428          
BLAST of FC876497 vs. ExPASy Swiss-Prot
Match: GTR3_RABIT (Solute carrier family 2, facilitated glucose transporter member 3 (Fragment) OS=Oryctolagus cuniculus GN=SLC2A3 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.835e-22
Identity = 66/253 (26.09%), Postives = 119/253 (47.04%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEE--LRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVG 774
            W  +LG + +PAI+Q   + F PESPR+L +  ++++A  +L  +  +   +D    +    EE   +R++K V  L++F++   R                 IN V YYS  I + AG +               N + TIV ++L++  GR+ L L  L G+ +  VL++ + +  X      +   + +  + +Y AFF  G GP+PW + + ++ +  R     ++   NW SN +V   F + A  +G
Sbjct:   87 WPVLLGFTIIPAILQSAALPFCPESPRFLLINKEEDEAKQILQILQRLWGTQDVAQDIQEMKEESARMRQEKQVTVLELFRAPSYRQPIIISIVLQLSQQLSGINAVFYYSTGIFKDAGVRE---PIYATIGAGVVNTIFTIVSVFLVERAGRRTLHLIGLGGMALCSVLMTVSLLLKXKYDTMSL---VCIAAILIYAAFFEIGPGPIPWLIVTGLFSQDPRPAAMAVAGCSNWTSNFLVGLLFPSAAYYLG 333          
BLAST of FC876497 vs. ExPASy Swiss-Prot
Match: PLT5_ARATH (Polyol transporter 5 OS=Arabidopsis thaliana GN=PLT5 PE=1 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 8.927e-22
Identity = 77/298 (25.84%), Postives = 128/298 (42.95%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYD-----IARLEDEIDHLSA-----------AAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLA---LYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATXXXXXXXXXXXXXXXXXXXPKTQG 858
            WR MLG+ AVP++I  + +L MPESPRWL M+     A  VL K  D       RLED I H +             +      +   R L +  +  +R                 I+ V+ +SP I + AG +++                  +V  +L+D  GR+ L L+S+ G+++SL  L  +           +  W  V+ +A    Y+A F+ G GP+ W  +SE++P + R     M   VN +++ +++ +FL +++ + TG                     P+TQG
Sbjct:  194 WRLMLGIGAVPSVILAIGVLAMPESPRWLVMQGRLGDAKRVLDKTSDSPTEATLRLED-IKHAAGIPADCHDDVVQVSRRNSHGEGVWRELLIRPTPAVRRVMIAAIGIHFFQQASGIDAVVLFSPRIFKTAGLKTDHQQLLATVAVGVVKTSFILVATFLLDRIGRRPLLLTSVGGMVLSLAALGTSLTIIDQSEKKVM--WAVVVAIATVMTYVATFSIGAGPITWVYSSEIFPLRLRSQGSSMGVVVNRVTSGVISISFLPMSKAMTTGGAFYLFGGIATVAWVFFYTFLPETQG 488          
BLAST of FC876497 vs. ExPASy Swiss-Prot
Match: GTR3_CANFA (Solute carrier family 2, facilitated glucose transporter member 3 OS=Canis familiaris GN=SLC2A3 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 8.927e-22
Identity = 63/260 (24.23%), Postives = 124/260 (47.69%), Query Frame = 1
Query:    7 GVPGTWRWMLGVSAVPAIIQFVLMLFMPESPRWLFM-KSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVI---GLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVG 774
            G    W  +LG + +PA++Q   + F PESPR+L + + ++E A  +L +++    +  +I  +   +   + ++K V  L++F+S+  R                 IN V YYS  I + AG +               N + T+V ++L++  GR+ L +  L G+ +  +L++ + +          Y W++ +    + +++AFF  G GP+PW + +E++ +  R     ++   NW SN +V   F + A  +G
Sbjct:  179 GTEELWPLLLGFTIIPAVLQSAALPFCPESPRFLLINRKEEENAKEILQRLWGTQDVSQDIQEMKDESAR-MAQEKQVTVLELFRSRSYRQPIIISIMLQLSQQLSGINAVFYYSTGIFKDAGVEE---PIYATIGAGVVNTIFTVVSLFLVERAGRRTLHMIGLGGMAVCSILMTISLLLKDN------YNWMSFVCIGAILVFVAFFEIGPGPIPWFIVAELFSQGPRPAAMAVAGCSNWTSNFLVGLLFPSAAFYLG 428          
BLAST of FC876497 vs. ExPASy Swiss-Prot
Match: ERDL6_ARATH (Sugar transporter ERD6-like 6 OS=Arabidopsis thaliana GN=At1g75220 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 8.927e-22
Identity = 71/250 (28.40%), Postives = 118/250 (47.20%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIQFVLMLFMPESPRWLF---MKSDKEKAILVLSKIY-DIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF-IXXXXXXXXXVYGWIA---VIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQT 747
            WR +  +  +P  +    + F+PESPRWL    M  + E ++ VL     DI    +EI    A++     K+ TVR++D+ K +                    IN V++YS TI + AG  S+               V T +  +L+D  GR+ L   S  G+ ISLV+++ AF +         +Y W++   V+G+   + FF+ GMGP+PW + SE+ P   +G+ G ++   NW  + ++  T
Sbjct:  199 WRILAVLGILPCTLLIPGLFFIPESPRWLAKMGMTDEFETSLQVLRGFETDITVEVNEIKRSVASST----KRNTVRFVDL-KRRRYYFPLMVGIGLLVLQQLGGINGVLFYSSTIFESAGVTSSNAATFGVG---AIQVVATAISTWLVDKAGRRLLLTISSVGMTISLVIVAAAFYLKEFVSPDSDMYSWLSILSVVGVVAMVVFFSLGMGPIPWLIMSEILPVNIKGLAGSIATLANWFFSWLITMT 440          
BLAST of FC876497 vs. ExPASy Swiss-Prot
Match: PLT1_ARATH (Putative polyol transporter 1 OS=Arabidopsis thaliana GN=PLT1 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.166e-21
Identity = 77/298 (25.84%), Postives = 128/298 (42.95%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVL-----------SKIYDIARL----EDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGW---IAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATXXXXXXXXXXXXXXXXXXXPKTQGL 861
            WR+MLGV AVP++   + +L MPESPRWL ++     A  VL           S++ DI R     +D  D +     ++   K   + L V  +  +R                 I+ V+ YSPTI   AG +S                +  +VG  ++D FGR+ L L+S+ G+ +SL  L  + +            W   +AV  +  ++A F+ G GPV W   SE++P + R     +   +N + + I+  TFL++++ +  G                     P+T+G+
Sbjct:  184 WRFMLGVGAVPSVFLAIGVLAMPESPRWLVLQGRLGDAFKVLDKTSNTKEEAISRLDDIKRAVGIPDDMTDDVIVVPNKKSAGKGVWKDLLVRPTPSVRHILIACLGIHFAQQASGIDAVVLYSPTIFSKAGLKSKNDQLLATVAVGVVKTLFIVVGTCVVDRFGRRALLLTSMGGMFLSLTALGTS-LTVINRNPGQTLKWAIGLAVTTVMTFVATFSIGAGPVTWVYCSEIFPVRLRAQGASLGVMLNRLMSGIIGMTFLSLSKGLTIGGAFLLFAGVAAAAWVFFFTFLPETRGI 480          
BLAST of FC876497 vs. ExPASy Swiss-Prot
Match: GTR4_HUMAN (Solute carrier family 2, facilitated glucose transporter member 4 OS=Homo sapiens GN=SLC2A4 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.166e-21
Identity = 73/264 (27.65%), Postives = 123/264 (46.59%), Query Frame = 1
Query:    7 GVPGTWRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKE----KAILVLSKIYDI----ARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVG 774
            G    W  +LG++ +PA++Q VL+ F PESPR+L++  + E    K++  L+   D+    A L+DE        + +L +++ +  L +  S+  R                 IN V YYS +I + AG                 N V T+V + L++  GR+ L L  LAG+    +L++ A +             +A+ G   ++AFF  G GP+PW + +E++ +  R     ++   NW SN I+   F  VAE +G
Sbjct:  197 GTASLWPLLLGLTVLPALLQLVLLPFCPESPRYLYIIQNLEGPARKSLKRLTGWADVSGVLAELKDE--------KRKLERERPLSLLQLLGSRTHRQPLIIAVVLQLSQQLSGINAVFYYSTSIFETAGVGQPAYATIGAGV---VNTVFTLVSVLLVERAGRRTLHLLGLAGMCGCAILMTVALLLLERVPAMSYVSIVAIFG---FVAFFEIGPGPIPWFIVAELFSQGPRPAAMAVAGFSNWTSNFIIGMGFQYVAEAMG 446          
The following BLAST results are available for this feature:
BLAST of FC876497 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 132
Match NameE-valueIdentityDescription
PLT2_ARATH4.007e-2226.17Putative polyol transporter 2 OS=Arabidopsis thali... [more]
ERDL7_ARATH4.007e-2228.92Sugar transporter ERD6-like 7 OS=Arabidopsis thali... [more]
ITR2_SCHPO6.835e-2227.10Myo-inositol transporter 2 OS=Schizosaccharomyces ... [more]
GTR3_SHEEP6.835e-2226.72Solute carrier family 2, facilitated glucose trans... [more]
GTR3_RABIT6.835e-2226.09Solute carrier family 2, facilitated glucose trans... [more]
PLT5_ARATH8.927e-2225.84Polyol transporter 5 OS=Arabidopsis thaliana GN=PL... [more]
GTR3_CANFA8.927e-2224.23Solute carrier family 2, facilitated glucose trans... [more]
ERDL6_ARATH8.927e-2228.40Sugar transporter ERD6-like 6 OS=Arabidopsis thali... [more]
PLT1_ARATH1.166e-2125.84Putative polyol transporter 1 OS=Arabidopsis thali... [more]
GTR4_HUMAN1.166e-2127.65Solute carrier family 2, facilitated glucose trans... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN2CE02RM1 EHR Citrus clementina cDNA clone KN0AAN2CE02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876497 ID=FC876497; Name=FC876497; organism=Citrus clementina; type=EST; length=871bp
GCACGAGGGGTCCCTGGAACATGGAGATGGATGCTTGGAGTATCAGCTGT
GCCAGCTATCATTCAGTTTGTCTTAATGCTTTTTATGCCGGAGTCTCCTA
GATGGCTTTTCATGAAGAGTGACAAAGAAAAAGCCATTTTGGTTCTTTCT
AAGATTTATGACATTGCTCGGTTAGAAGATGAAATTGATCACCTTTCAGC
TGCTGCAGAGGAAGAACTCCGAAAAAAGAAAACTGTCAGATACTTGGATG
TTTTTAAATCCAAAGAAATCAGACTTGCATTTCTGGCTGGGGCTGGACTT
CAGGCATTTCAGCAGTTCACTGGTATCAACACAGTCATGTACTACAGCCC
GACAATTGTCCAAATGGCTGGCTTCCAGTCCAACCAGCTAGCGCTTCTCC
TATCTCTTGCTGTTGCTGGTACAAATGCAGTTGGCACAATTGTTGGAATT
TATCTTATTGACCATTTTGGAAGGAAAAAGTTGGCCCTCTCTAGCTTAGC
TGGTGTTATTATATCCCTCGTCTTACTCTCTTGGGCATTCATCAGTGGAT
CATCTGCTTCTTCAAGTGGAGTCTATGGTTGGATTGCAGTCATCGGGTTA
GCCCTATATATTGCTTTCTTTGCACCTGGAATGGGACCTGTGCCATGGAC
TCTGAACTCTGAGGTGTATCCTGAGCAATACCGTGGAATTTGTGGAGGTA
TGTCAGCTACTGTGAACTGGATCTCAAATTTGATCGTGGCCCAAACCTTC
CTGACGGTTGCTGAACTAGTGGGCACTGGAGCCACTTTCTTGATTCTTGC
TGGCCTTGCTGTACTTGCAGTTGTGTTTGTGATTCTGTTTGTGCCAAAAA
CTCAGGGACTGACATTTTTGG
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