FC876497

Overview
NameFC876497
Unique NameFC876497
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length871
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10428 contig Ccv1_Contig10428:2..872. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876497 vs. ExPASy Swiss-Prot
Match: GTR3_HUMAN (Solute carrier family 2, facilitated glucose transporter member 3 OS=Homo sapiens GN=SLC2A3 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.398e-20
Identity = 61/252 (24.21%), Postives = 117/252 (46.43%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIQFVLMLFMPESPRWLFM-KSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVG 774
            W  +LG + +PAI+Q   + F PESPR+L + + ++E A  +L +++    +  +I  +   +   + ++K V  L++F+    R                 IN V YYS  I + AG Q               N + T+V ++L++  GR+ L +  L G+     L++ + +            ++ +  + +++AFF  G GP+PW + +E++ +  R     ++   NW SN +V   F + A  +G
Sbjct:  184 WPLLLGFTILPAILQSAALPFCPESPRFLLINRKEEENAKQILQRLWGTQDVSQDIQEMKDESAR-MSQEKQVTVLELFRVSSYRQPIIISIVLQLSQQLSGINAVFYYSTGIFKDAGVQE---PIYATIGAGVVNTIFTVVSLFLVERAGRRTLHMIGLGGMAFCSTLMTVSLLLKDNYNGM---SFVCIGAILVFVAFFEIGPGPIPWFIVAELFSQGPRPAAMAVAGCSNWTSNFLVGLLFPSAAHYLG 428          
BLAST of FC876497 vs. ExPASy Swiss-Prot
Match: XYLL2_ARATH (D-xylose-proton symporter-like 2 OS=Arabidopsis thaliana GN=At5g17010 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.356e-20
Identity = 72/292 (24.66%), Postives = 129/292 (44.18%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIQFVLMLFMPESPRWLFMK---------SDKEKAILVLSKIYDIARLEDEIDHLSAAAEEE--LRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATXXXXXXXXXXXXXXXXXXXPKTQGLT 864
            WR+M   S   A+I  + M ++P SPRWL ++         + +E AI  L  +   A ++   + ++    E   + + K V + ++F+ K ++                   +V+YY+P+I+Q AGF +                + T V + +ID  GR+ L L  + G+++SL LL   ++             +AV+ L LY+  +    GP+ W + SE++P + RG    ++  VN+ +N +V   F  + EL+G G                     P+T+GLT
Sbjct:  210 WRYMYATSVPLAVIMGIGMWWLPASPRWLLLRVIQGKGNVENQREAAIKSLCCLRGPAFVDSAAEQVNEILAELTFVGEDKEVTFGELFQGKCLKALIIGGGLVLFQQITGQ-PSVLYYAPSILQTAGFSAAGDATRVSILLGLLKLIMTGVAVVVIDRLGRRPLLLGGVGGMVVSLFLLGSYYLFFSASPV------VAVVALLLYVGCYQLSFGPIGWLMISEIFPLKLRGRGLSLAVLVNFGANALVTFAFSPLKELLGAGILFCGFGVICVLSLVFIFFIVPETKGLT 494          
BLAST of FC876497 vs. ExPASy Swiss-Prot
Match: XYLE_ECOLI (D-xylose-proton symporter OS=Escherichia coli (strain K12) GN=xylE PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.091e-19
Identity = 66/243 (27.16%), Postives = 105/243 (43.21%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTF 750
            WR+M     +PA++  +L+  +PESPRWL  +  +E+A  +L KI         +  +  + +     +KT   L +F    I                  IN V+YY+P + +  G  S              N   T++ I  +D FGRK L +    G+ I +  L  AF            G +A++ +  Y+A FA   GPV W L SE++P   RG    ++    W++N  V+ TF
Sbjct:  199 WRYMFASECIPALLFLMLLYTVPESPRWLMSRGKQEQAEGILRKIMGNTLATQAVQEIKHSLDHG---RKTGGRLLMFGVGVI----VIGVMLSIFQQFVGINVVLYYAPEVFKTLG-ASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAP-------GIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTF 426          
BLAST of FC876497 vs. ExPASy Swiss-Prot
Match: XYLE_ECO57 (D-xylose-proton symporter OS=Escherichia coli O157:H7 GN=xylE PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.091e-19
Identity = 66/243 (27.16%), Postives = 105/243 (43.21%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTF 750
            WR+M     +PA++  +L+  +PESPRWL  +  +E+A  +L KI         +  +  + +     +KT   L +F    I                  IN V+YY+P + +  G  S              N   T++ I  +D FGRK L +    G+ I +  L  AF            G +A++ +  Y+A FA   GPV W L SE++P   RG    ++    W++N  V+ TF
Sbjct:  199 WRYMFASECIPALLFLMLLYTVPESPRWLMSRGKQEQAEGILRKIMGNTLATQAVQEIKHSLDHG---RKTGGRLLMFGVGVI----VIGVMLSIFQQFVGINVVLYYAPEVFKTLG-ASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAP-------GIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTF 426          
BLAST of FC876497 vs. ExPASy Swiss-Prot
Match: GTR3_PONAB (Solute carrier family 2, facilitated glucose transporter member 3 OS=Pongo abelii GN=SLC2A3 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.861e-19
Identity = 60/252 (23.81%), Postives = 116/252 (46.03%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIQFVLMLFMPESPRWLFM-KSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVG 774
            W  +LG + +P I+Q   + F PESPR+L + + ++E A  +L +++    +  +I  +   +   + ++K V  L++F+    R                 IN V YYS  I + AG Q               N + T+V ++L++  GR+ L +  L G+     L++ + +            ++ +  + +++AFF  G GP+PW + +E++ +  R     ++   NW SN +V   F + A  +G
Sbjct:  184 WPLLLGFTILPTILQSAALPFCPESPRFLLINRKEEENAKQILQRLWGTQDVSQDIQEMKDESAR-MSQEKQVTVLELFRVSSYRQPIIISIVLQLSQQLSGINAVFYYSTGIFKDAGVQE---PIYATIGAGVVNTIFTVVSLFLVERAGRRTLHMIGLGGMAFCSTLMTVSLLLKDNYNGM---SFVCIGAILVFVAFFEIGPGPIPWFIVAELFSQGPRPAAMAVAGCSNWTSNFLVGLLFPSAAHYLG 428          
BLAST of FC876497 vs. ExPASy Swiss-Prot
Match: EDL16_ARATH (Sugar transporter ERD6-like 16 OS=Arabidopsis thaliana GN=At5g18840 PE=2 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 2.431e-19
Identity = 68/252 (26.98%), Postives = 113/252 (44.84%), Query Frame = 1
Query:   19 TWRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDI-ARLEDEIDHLSAAAEE-ELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVG------TIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTF 750
            +W+ +      P I+    + F+PESPRWL     +++  + L K+    A + +E D +  + +  E+  K  ++ L    SK+                   IN + +Y+      AGF S +          GT A+       T++G  LID  GR+ L + S  G+ +  +L   +F+             +AV G+ +Y+A F+ GMGPVPW + SE++P   +GI G +   VNW     V+ TF
Sbjct:  194 SWKTLALTGLAPCIVLLFGLCFIPESPRWLAKAGHEKEFRVALQKLRGKDADITNEADGIQVSIQALEILPKARIQDL---VSKKYGRSVIIGVSLMVFQQFVGINGIGFYASETFVKAGFTSGKL---------GTIAIACVQVPITVLGTILIDKSGRRPLIMISAGGIFLGCILTGTSFLLKGQSLLLEWVPSLAVGGVLIYVAAFSIGMGPVPWVIMSEIFPINVKGIAGSLVVLVNWSGAWAVSYTF 433          
BLAST of FC876497 vs. ExPASy Swiss-Prot
Match: PLST1_ARATH (Probable plastidic glucose transporter 1 OS=Arabidopsis thaliana GN=At1g05030 PE=2 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 5.416e-19
Identity = 71/256 (27.73%), Postives = 113/256 (44.14%), Query Frame = 1
Query:   13 PGTWRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTG 780
            P  WR ML V+++P  +  + M F  ESPRWL      + A +V+  I+  + +E  ++   +  +       + R+L++      R                 IN V+Y+S    Q  G  S             TN  G +   YLID  GRKKL + S  G+ +S+ L+ +A           +   ++++G  +YI  FA G GPV   +  E+   + RG   G S +V+W+SN +V   FL + E  G G
Sbjct:  234 PHWWRTMLYVASMPGFLLALGMQFAVESPRWLCKVGRLDDAKVVIRNIWGGSEVEKAVEDFQSVMKNSGSNLNS-RWLELLDKPHSRVAFIGGSLFVLQQFAG-INGVLYFSSLTFQNVGITSGAQASLYVGV---TNFAGALCASYLIDKQGRKKLLIGSYLGMAVSMFLIVYAV---GFPLDEDLSQSLSILGTLMYIFSFAIGAGPVTGLIIPELSSNRTRGKIMGFSFSVHWVSNFLVGLFFLDLVEKYGVG 481          
BLAST of FC876497 vs. ExPASy Swiss-Prot
Match: EDL18_ARATH (Sugar transporter ERD6-like 18 OS=Arabidopsis thaliana GN=SFP2 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.416e-19
Identity = 68/253 (26.88%), Postives = 119/253 (47.04%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIQFVLMLFMPESPRWLF-MKSDKE---KAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVG------TIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTF 750
            WR +  + A+P  IQ + + F+PESPRWL  + SDKE     + +     DI+R   +I+ ++   E + +      + D+F+ K  R                  + V+ Y+ TI++ AGF              G+  +G       ++G+ L+D +GR+ L L+S++G+ I+ +L+  AF          +      I + LYI  +A G+G +PW + SE++P   +   G +   V+W S+ IV   F
Sbjct:  186 WRILALLGALPCFIQVIGLFFVPESPRWLAKVGSDKELENSLLRLRGGNADISREASDIEVMTKMVENDSKSS----FCDLFQRK-YRYTLVVGIGLMLIQQFSGSSAVLSYASTILRKAGFSVT----------IGSTLLGLFMIPKAMIGVILVDKWGRRPLLLTSVSGMCITSMLIGVAFTLQKMQLLPELTPVFTFICVTLYIGTYAIGLGGLPWVIMSEIFPMNIKVTAGSIVTLVSWSSSSIVTYAF 423          
BLAST of FC876497 vs. ExPASy Swiss-Prot
Match: ERDL4_ARATH (Sugar transporter ERD6-like 4 OS=Arabidopsis thaliana GN=At1g19450 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.238e-19
Identity = 67/250 (26.80%), Postives = 114/250 (45.60%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIQFVLMLFMPESPRWLF---MKSDKEKAILVLSKIY-DIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF----IXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQT 747
            WR +  +  +P  +    + F+PESPRWL    +  D E ++ VL     DI    +EI    A++     K+  VR++D+ K +                    IN V++YS TI + AG  S+               V T +  +L+D  GR+ L + S  G+ ISLV+++ AF              +   ++V+G+   +   + GMGP+PW + SE+ P   +G+ G ++  +NW  + +V  T
Sbjct:  200 WRILAVLGVLPCTLLIPGLFFIPESPRWLAKMGLTDDFETSLQVLRGFETDITVEVNEIKRSVASSS----KRSAVRFVDL-KRRRYYFPLMVGIGLLALQQLGGINGVLFYSSTIFESAGVTSSNVATFGVGV---VQVVATGIATWLVDKAGRRLLLMISSIGMTISLVIVAVAFYLKEFVSPDSNMYNILSMVSVVGVVAMVISCSLGMGPIPWLIMSEILPVNIKGLAGSIATLLNWFVSWLVTMT 441          
BLAST of FC876497 vs. ExPASy Swiss-Prot
Match: STP12_ARATH (Sugar transport protein 12 OS=Arabidopsis thaliana GN=STP12 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.207e-18
Identity = 68/249 (27.31%), Postives = 112/249 (44.98%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF-----IXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFL 753
            WR  LG + VPA+I  V  L +P++P  +  +     A   L KI  +  ++DEI+ L  A+E     +   R L     ++ R                 IN +M+Y+P + Q  GF S+             N   T+V IY +D +GR+ L L     ++IS V ++ A      +          Y  + V+ + +Y+A FA   GP+ W + SE++P + R     ++ +VN I   ++AQ FL
Sbjct:  199 WRLSLGGAVVPALIITVGSLILPDTPNSMIERGQFRLAEAKLRKIRGVDDIDDEINDLIIASEASKLVEHPWRNL---LQRKYRPHLTMAILIPAFQQLTGINVIMFYAPVLFQTIGFGSDAALISAVVTGL-VNVGATVVSIYGVDKWGRRFLFLEGGFQMLISQVAVAAAIGAKFGVDGTPGVLPKWYAIVVVLFICIYVAAFAWSWGPLGWLVPSEIFPLEIRSAAQSITVSVNMIFTFLIAQVFL 443          
The following BLAST results are available for this feature:
BLAST of FC876497 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 132
Match NameE-valueIdentityDescription
GTR3_HUMAN6.398e-2024.21Solute carrier family 2, facilitated glucose trans... [more]
XYLL2_ARATH8.356e-2024.66D-xylose-proton symporter-like 2 OS=Arabidopsis th... [more]
XYLE_ECOLI1.091e-1927.16D-xylose-proton symporter OS=Escherichia coli (str... [more]
XYLE_ECO571.091e-1927.16D-xylose-proton symporter OS=Escherichia coli O157... [more]
GTR3_PONAB1.861e-1923.81Solute carrier family 2, facilitated glucose trans... [more]
EDL16_ARATH2.431e-1926.98Sugar transporter ERD6-like 16 OS=Arabidopsis thal... [more]
PLST1_ARATH5.416e-1927.73Probable plastidic glucose transporter 1 OS=Arabid... [more]
EDL18_ARATH5.416e-1926.88Sugar transporter ERD6-like 18 OS=Arabidopsis thal... [more]
ERDL4_ARATH9.238e-1926.80Sugar transporter ERD6-like 4 OS=Arabidopsis thali... [more]
STP12_ARATH1.207e-1827.31Sugar transport protein 12 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN2CE02RM1 EHR Citrus clementina cDNA clone KN0AAN2CE02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876497 ID=FC876497; Name=FC876497; organism=Citrus clementina; type=EST; length=871bp
GCACGAGGGGTCCCTGGAACATGGAGATGGATGCTTGGAGTATCAGCTGT
GCCAGCTATCATTCAGTTTGTCTTAATGCTTTTTATGCCGGAGTCTCCTA
GATGGCTTTTCATGAAGAGTGACAAAGAAAAAGCCATTTTGGTTCTTTCT
AAGATTTATGACATTGCTCGGTTAGAAGATGAAATTGATCACCTTTCAGC
TGCTGCAGAGGAAGAACTCCGAAAAAAGAAAACTGTCAGATACTTGGATG
TTTTTAAATCCAAAGAAATCAGACTTGCATTTCTGGCTGGGGCTGGACTT
CAGGCATTTCAGCAGTTCACTGGTATCAACACAGTCATGTACTACAGCCC
GACAATTGTCCAAATGGCTGGCTTCCAGTCCAACCAGCTAGCGCTTCTCC
TATCTCTTGCTGTTGCTGGTACAAATGCAGTTGGCACAATTGTTGGAATT
TATCTTATTGACCATTTTGGAAGGAAAAAGTTGGCCCTCTCTAGCTTAGC
TGGTGTTATTATATCCCTCGTCTTACTCTCTTGGGCATTCATCAGTGGAT
CATCTGCTTCTTCAAGTGGAGTCTATGGTTGGATTGCAGTCATCGGGTTA
GCCCTATATATTGCTTTCTTTGCACCTGGAATGGGACCTGTGCCATGGAC
TCTGAACTCTGAGGTGTATCCTGAGCAATACCGTGGAATTTGTGGAGGTA
TGTCAGCTACTGTGAACTGGATCTCAAATTTGATCGTGGCCCAAACCTTC
CTGACGGTTGCTGAACTAGTGGGCACTGGAGCCACTTTCTTGATTCTTGC
TGGCCTTGCTGTACTTGCAGTTGTGTTTGTGATTCTGTTTGTGCCAAAAA
CTCAGGGACTGACATTTTTGG
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