FC876497

Overview
NameFC876497
Unique NameFC876497
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length871
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10428 contig Ccv1_Contig10428:2..872. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876497 vs. ExPASy Swiss-Prot
Match: STP6_ARATH (Sugar transport protein 6 OS=Arabidopsis thaliana GN=STP6 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 9.560e-16
Identity = 65/253 (25.69%), Postives = 107/253 (42.29%), Query Frame = 1
Query:   13 PGTWRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYG----WIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTV 759
            P  WR  LG + +PA+I     L + E+P  L  ++  E+    L KI  +  + DE + +  A +   + K   R L        R                 IN +M+Y+P + Q  GF S+             N + T VGIYL+D  GR+ L L S   ++I  +++    I           G     + VI + +Y+  FA   GP+ W + SE +P + R     ++ + N     ++AQ FL++
Sbjct:  194 PYGWRIALGGAGIPAVILLFGSLLIIETPTSLIERNKNEEGKEALRKIRGVDDINDEYESIVHACDIASQVKDPYRKL---LKPASRPPFIIGMLLQLFQQFTGINAIMFYAPVLFQTVGFGSDAALLSAVITG-SINVLATFVGIYLVDRTGRRFLLLQSSVHMLICQLIIG--IILAKDLGVTGTLGRPQALVVVIFVCVYVMGFAWSWGPLGWLIPSETFPLETRSAGFAVAVSCNMFFTFVIAQAFLSM 440          
BLAST of FC876497 vs. ExPASy Swiss-Prot
Match: STP7_ARATH (Sugar transport protein 7 OS=Arabidopsis thaliana GN=STP7 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.249e-15
Identity = 63/249 (25.30%), Postives = 107/249 (42.97%), Query Frame = 1
Query:   13 PGTWRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGW--IAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFL 753
            P  WR  LG++A PA++  +   F+PE+P  L  +   E+   VL K+     +  E+  +  A+E     K   R +     K  R                 IN++++Y+P + Q  GF  N               + T + I L+D  GR+ L ++    +II  V+++               G+  I VI + L++  F    GP+ WT+ SE++P + R     ++  VN +   I+AQ FL
Sbjct:  200 PWGWRLSLGLAAFPALLMTLGGYFLPETPNSLVERGLTERGRRVLVKLRGTENVNAELQDMVDASELANSIKHPFRNI---LQKRHRPQLVMAICMPMFQILTGINSILFYAPVLFQTMGFGGNASLYSSALTG-AVLVLSTFISIGLVDRLGRRALLITGGIQMIICQVIVAVILGVKFGDNQELSKGYSVIVVIFICLFVVAFGWSWGPLGWTIPSEIFPLETRSAGQSITVAVNLLFTFIIAQAFL 444          
BLAST of FC876497 vs. ExPASy Swiss-Prot
Match: GTR9_HUMAN (Solute carrier family 2, facilitated glucose transporter member 9 OS=Homo sapiens GN=SLC2A9 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.249e-15
Identity = 57/263 (21.67%), Postives = 116/263 (44.11%), Query Frame = 1
Query:    7 GVPGTWRWMLGVSAVPAIIQFVLMLFMPESPRWLFM-KSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIY---LIDHFGRKKLALS--SLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGT 777
            G   TW ++ GV  VPA++Q + + F+P+SPR+L + K ++ +A+         A +  E++ + A +  + R  + V  L++ ++  +R                 +N + +Y+ +I   AG                T  + T+  ++   +I+H GR+ L +    L G+    + ++                +++++G+   IA F  G G +P+ L  E + +  R     ++ TVNW+SN  V   F  + + + T
Sbjct:  226 GKESTWPYLFGVIVVPAVVQLLSLPFLPDSPRYLLLEKHNEARAVKAFQTFLGKADVSQEVEEVLAESRVQ-RSIRLVSVLELLRAPYVRWQVVTVIVTMACYQLCGLNAIWFYTNSIFGKAGI----PLAKIPYVTLSTGGIETLAAVFSGLVIEHLGRRPLLIGGFGLMGLFFGTLTITLTLQDHAPWVP-----YLSIVGILAIIASFCSGPGGIPFILTGEFFQQSQRPAAFIIAGTVNWLSNFAVGLLFPFIQKSLDT 478          
BLAST of FC876497 vs. ExPASy Swiss-Prot
Match: GTR5_BOVIN (Solute carrier family 2, facilitated glucose transporter member 5 OS=Bos taurus GN=SLC2A5 PE=2 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.631e-15
Identity = 68/264 (25.76%), Postives = 119/264 (45.08%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIQFVLMLFMPESPRWLFM-KSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDV---FKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVG---TIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAF---FAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGA 783
            W  +LG++ +PA++Q + + F PESPR+L + K D+  A   L ++     ++ EI+ +     EE R +K V ++ V   FK + +R                 +N + YY+  I   AG   +           GT AV    T+  I++++  GR+ L L   +    +  +L+ A           V  W+  + +A  I++    A G  P+P  L +E++ +  R     ++ TV+W+SN  V   F  +   VG GA
Sbjct:  192 WPILLGLTGIPAVLQLLFLPFFPESPRYLLIQKKDEAAAKSALRRLRGWHDVDAEIEEIL----EEDRAEKAVGFISVLKLFKMRSLRWQVISIIVLMAGQQLSGVNAIYYYADQIYLSAGVNEDD----VQYVTAGTGAVNVLITVCAIFVVELMGRRFLLLLGFSVCFTACCVLTGAL------ALQDVISWMPYVSIACVISYVIGHALGPSPIPALLVTEIFLQSSRPAAYMVAGTVHWLSNFTVGLVFPFIQ--VGLGA 439          
BLAST of FC876497 vs. ExPASy Swiss-Prot
Match: STP10_ARATH (Sugar transport protein 10 OS=Arabidopsis thaliana GN=STP10 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.130e-15
Identity = 64/252 (25.40%), Postives = 109/252 (43.25%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFI------XXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTV 759
            WR  LG++AVPA++  +    +P++P  +  +   E+A  +L KI     ++ E   L  A   E  KK    + ++ +SK  R                 IN +M+Y+P + +  GF  +             N + T V IY +D +GR+ L L     + I  +L+  +FI                  WI    + +Y+A FA   GP+ W + SE+ P + R     ++ +VN     ++ Q FLT+
Sbjct:  202 WRVSLGLAAVPAVVMVIGSFILPDTPNSMLERGKNEEAKQMLKKIRGADNVDHEFQDLIDAV--EAAKKVENPWKNIMESK-YRPALIFCSAIPFFQQITGINVIMFYAPVLFKTLGF-GDDAALMSAVITGVVNMLSTFVSIYAVDRYGRRLLFLEGGIQMFICQLLVG-SFIGARFGTSGTGTLTPATADWILAF-ICVYVAGFAWSWGPLGWLVPSEICPLEIRPAGQAINVSVNMFFTFLIGQFFLTM 447          
BLAST of FC876497 vs. ExPASy Swiss-Prot
Match: GTR9_PONAB (Solute carrier family 2, facilitated glucose transporter member 9 OS=Pongo abelii GN=SLC2A9 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.782e-15
Identity = 56/261 (21.46%), Postives = 115/261 (44.06%), Query Frame = 1
Query:    7 GVPGTWRWMLGVSAVPAIIQFVLMLFMPESPRWLFM-KSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIY---LIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGT 777
            G   TW ++ GV  VPA++Q + + F+P+SPR+L + K ++ +A+         A +  E++ ++ +  +  R  + V  L++ ++  +R                 +N + +Y+ +I   AG    +           T  + T+  I+   +I+H GR+ L    + G  +  +      +            +++++G+   IA F  G G +P+ L  E + +  R     ++ TVNW+SN  V   F  + + + T
Sbjct:  226 GKESTWPYLFGVIVVPAVVQLLSLPFLPDSPRYLLLEKRNEARAVKAFQTFLGKADVSREVEEVAESRVQ--RSIRLVSVLELLRAPYVRWQVVTVIVTMACYQLCGLNAIWFYTNSIFGKAGIPPAK----IPYVTLSTGGIETLAAIFSGLVIEHLGRRPLL---IGGFGLMALFFGTLTVTLTLQDRAPWVPYLSIVGILAIIASFCSGPGGIPFILTGEFFQQSQRPAAFIIAGTVNWLSNFAVGLLFPFIQKSLDT 477          
BLAST of FC876497 vs. ExPASy Swiss-Prot
Match: ERDL1_ARATH (Sugar transporter ERD6-like 1 OS=Arabidopsis thaliana GN=SUGTL4 PE=2 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 2.782e-15
Identity = 63/254 (24.80%), Postives = 107/254 (42.13%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAE-----EELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVG------TIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTF 750
            WR +  +SA+P  IQ + + F+PESPRWL M   + +  + L ++       +  D L  AAE     E  R++      D+F  K                     + +  Y+  I   AGF S+           GT+ +       +I+ ++ +D  GR+ L +SS  G+ I   L+  ++              I ++GL  Y+  F  G+G +PW + SEV+P   +   G +    NW  + I+  +F
Sbjct:  178 WRTLALLSAIPCGIQMICLFFIPESPRWLAMYGRERELEVTLKRLRG-----ENGDILEEAAEIRETVETSRRESRSGLKDLFNMKNAHPLIIGLGLMLLQQFCGS-SAISAYAARIFDTAGFPSD----------IGTSILAVILVPQSIIVMFAVDRCGRRPLLMSSSIGLCICSFLIGLSYYLQNHGDFQEFCSPILIVGLVGYVLSFGIGLGGLPWVIMSEVFPVNVKITAGSLVTVSNWFFSWIIIFSF 415          
BLAST of FC876497 vs. ExPASy Swiss-Prot
Match: STP14_ARATH (Sugar transport protein 14 OS=Arabidopsis thaliana GN=STP14 PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 6.197e-15
Identity = 65/252 (25.79%), Postives = 109/252 (43.25%), Query Frame = 1
Query:   13 PGTWRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNA---VGTIVGIYLIDHFGRKKLALSSLAGVIISLVL--LSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFL 753
            P  WR  LG++ VPAI+ F+  L +PE+P  L  +   EKA  VL K+     +E E   L  A++     K   R L   +++                    +N++++Y+P + Q  GF  +            TNA   V  I+ +Y  D FGR+ L L +   +   +V+  ++ A             G I V+ + L++  +    GP+ W + SE++P + R     +   VN     ++AQ FL
Sbjct:  200 PWGWRLSLGLATVPAILMFLGGLVLPETPNSLVEQGKLEKAKAVLIKVRGTNNIEAEFQDLVEASDAARAVKNPFRNLLARRNRP--QLVIGAIGLPAFQQLTGMNSILFYAPVMFQSLGFGGSASLISSTI----TNAALVVAAIMSMYSADKFGRRFLLLEASVEMFCYMVVVGVTLALKFGEGKELPKSLGLILVVLICLFVLAYGRSWGPMGWLVPSELFPLETRSAGQSVVVCVNLFFTALIAQCFL 445          
BLAST of FC876497 vs. ExPASy Swiss-Prot
Match: GTR5_RAT (Solute carrier family 2, facilitated glucose transporter member 5 OS=Rattus norvegicus GN=Slc2a5 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.197e-15
Identity = 59/249 (23.69%), Postives = 112/249 (44.98%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDV---FKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVG---TIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTF 750
            W  +LG++ VPA +Q +L+ F PESPR+L ++   E A     K     R   ++D       +E   +K   ++ V   F+ + +R                 +N + YY+  I   AG +SN           GT AV    T+V +++++ +GR+ L L   +  + + ++L+ A              +++++ + +Y+   A G  P+P    +E++ +  R     +  +V+W+SN IV   F
Sbjct:  191 WPILLGLTGVPAGLQLLLLPFFPESPRYLLIQKKNESA---AEKALQTLRGWKDVDMEMEEIRKEDEAEKAAGFISVWKLFRMQSLRWQLISTIVLMAGQQLSGVNAIYYYADQIYLSAGVKSND----VQYVTAGTGAVNVFMTMVTVFVVELWGRRNLLLIGFSTCLTACIVLTVALALQNTISWMP---YVSIVCVIVYVIGHAVGPSPIPALFITEIFLQSSRPSAYMIGGSVHWLSNFIVGLIF 429          
BLAST of FC876497 vs. ExPASy Swiss-Prot
Match: GTR5_PONAB (Solute carrier family 2, facilitated glucose transporter member 5 OS=Pongo abelii GN=SLC2A5 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.197e-15
Identity = 60/254 (23.62%), Postives = 109/254 (42.91%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDV---FKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVG 774
            W  +LG++ VPA +Q VL+ F PESPR+L ++   E A     K     R  D +D   A   +E   +K   ++ V   F+ + +R                 +N + YY+  I   AG    +            N V T   +++++  GR+ L L   +  +++  +L+ A              +I+++ +  Y+   A G  P+P  L +E++ +  R     +  +V+W+SN  V   F  + E +G
Sbjct:  192 WPILLGLTGVPAALQLVLLPFFPESPRYLLIQKKDEAA---AKKALQTLRGWDSVDREVAEIRQEDEAEKAAGFISVLKLFRMRSLRWQLLSIIVLMGGQQLSGVNAIYYYADQIYLSAGV-PKEHVQFVTAGTGAVNVVMTFCAVFVVELLGRRLLLLLGFSICLVACCVLTAALALQDTVSWMP---YISIVCVISYVIGHALGPSPIPALLITEIFLQSSRPSAFMVGGSVHWLSNFTVGLIFPFIQEGLG 438          
The following BLAST results are available for this feature:
BLAST of FC876497 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 132
Match NameE-valueIdentityDescription
STP6_ARATH9.560e-1625.69Sugar transport protein 6 OS=Arabidopsis thaliana ... [more]
STP7_ARATH1.249e-1525.30Sugar transport protein 7 OS=Arabidopsis thaliana ... [more]
GTR9_HUMAN1.249e-1521.67Solute carrier family 2, facilitated glucose trans... [more]
GTR5_BOVIN1.631e-1525.76Solute carrier family 2, facilitated glucose trans... [more]
STP10_ARATH2.130e-1525.40Sugar transport protein 10 OS=Arabidopsis thaliana... [more]
GTR9_PONAB2.782e-1521.46Solute carrier family 2, facilitated glucose trans... [more]
ERDL1_ARATH2.782e-1524.80Sugar transporter ERD6-like 1 OS=Arabidopsis thali... [more]
STP14_ARATH6.197e-1525.79Sugar transport protein 14 OS=Arabidopsis thaliana... [more]
GTR5_RAT6.197e-1523.69Solute carrier family 2, facilitated glucose trans... [more]
GTR5_PONAB6.197e-1523.62Solute carrier family 2, facilitated glucose trans... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN2CE02RM1 EHR Citrus clementina cDNA clone KN0AAN2CE02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876497 ID=FC876497; Name=FC876497; organism=Citrus clementina; type=EST; length=871bp
GCACGAGGGGTCCCTGGAACATGGAGATGGATGCTTGGAGTATCAGCTGT
GCCAGCTATCATTCAGTTTGTCTTAATGCTTTTTATGCCGGAGTCTCCTA
GATGGCTTTTCATGAAGAGTGACAAAGAAAAAGCCATTTTGGTTCTTTCT
AAGATTTATGACATTGCTCGGTTAGAAGATGAAATTGATCACCTTTCAGC
TGCTGCAGAGGAAGAACTCCGAAAAAAGAAAACTGTCAGATACTTGGATG
TTTTTAAATCCAAAGAAATCAGACTTGCATTTCTGGCTGGGGCTGGACTT
CAGGCATTTCAGCAGTTCACTGGTATCAACACAGTCATGTACTACAGCCC
GACAATTGTCCAAATGGCTGGCTTCCAGTCCAACCAGCTAGCGCTTCTCC
TATCTCTTGCTGTTGCTGGTACAAATGCAGTTGGCACAATTGTTGGAATT
TATCTTATTGACCATTTTGGAAGGAAAAAGTTGGCCCTCTCTAGCTTAGC
TGGTGTTATTATATCCCTCGTCTTACTCTCTTGGGCATTCATCAGTGGAT
CATCTGCTTCTTCAAGTGGAGTCTATGGTTGGATTGCAGTCATCGGGTTA
GCCCTATATATTGCTTTCTTTGCACCTGGAATGGGACCTGTGCCATGGAC
TCTGAACTCTGAGGTGTATCCTGAGCAATACCGTGGAATTTGTGGAGGTA
TGTCAGCTACTGTGAACTGGATCTCAAATTTGATCGTGGCCCAAACCTTC
CTGACGGTTGCTGAACTAGTGGGCACTGGAGCCACTTTCTTGATTCTTGC
TGGCCTTGCTGTACTTGCAGTTGTGTTTGTGATTCTGTTTGTGCCAAAAA
CTCAGGGACTGACATTTTTGG
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