FC876499
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876499 vs. ExPASy Swiss-Prot
Match: GRPE_SYNS9 (Protein grpE OS=Synechococcus sp. (strain CC9902) GN=grpE PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 6.351e-22 Identity = 50/119 (42.02%), Postives = 80/119 (67.23%), Query Frame = 1 Query: 472 LERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEXINNSYQSIYKQLVEILXSLGVVPVETVGNPFDPLLHEAIMREDS 828 LE+++ +L +E A +++ +RI+ADFDNFRKR +++ L + +L V+DNFERA+ Q+ + E + ++ SYQ +YKQLV++L GV +E VG FDP LHEA++RE++ Sbjct: 54 LEQELNSLKQEHEAVQSQYMRIAADFDNFRKRQARDQDDLRQQLVCSTLTEILPVVDNFERARQQLNPEGEEAQALHRSYQGLYKQLVDVLKQQGVARMEVVGQEFDPTLHEAVLREEN 172
BLAST of FC876499 vs. ExPASy Swiss-Prot
Match: GRPE_SYNPX (Protein grpE OS=Synechococcus sp. (strain WH8102) GN=grpE PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 8.295e-22 Identity = 49/119 (41.18%), Postives = 78/119 (65.55%), Query Frame = 1 Query: 472 LERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEXINNSYQSIYKQLVEILXSLGVVPVETVGNPFDPLLHEAIMREDS 828 LE ++ L +E +++ +RI+ADFDNFRKR +++ + + +L V+DNFERA+ Q+ ++E + ++ SYQ +YKQLV++L GV +E VG FDP LHEA++RE+S Sbjct: 49 LEHELQTLKQEHETLQSQYMRIAADFDNFRKRQSRDQEDIRQQLVCSTLSEILPVVDNFERARQQLNPESEEAQALHRSYQGLYKQLVDVLKQQGVARMEVVGQLFDPTLHEAVLREES 167
BLAST of FC876499 vs. ExPASy Swiss-Prot
Match: GRPE_PROMP (Protein grpE OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=grpE PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 8.295e-22 Identity = 54/135 (40.00%), Postives = 83/135 (61.48%), Query Frame = 1 Query: 454 EDEKI---DLERKVVN-------LSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEXINNSYQSIYKQLVEILXSLGVVPVETVGNPFDPLLHEAIMREDS 828 +DE I DL+ + N L +E +++ +RI+ADFDNFRKR +++ L + + +L ++DNFERA+ Q+K ++E + ++ SYQ +YKQLVE+L GV P+ V FDP LHEA++RE S Sbjct: 43 DDENIYAEDLKNTITNNDARLEQLEKEHETLKSQYVRIAADFDNFRKRQSRDQDDLKVQLVSKALTAILPIVDNFERARQQLKPESEEAQTLHRSYQGLYKQLVEVLKQQGVSPMRVVAQQFDPKLHEAVLREPS 177
BLAST of FC876499 vs. ExPASy Swiss-Prot
Match: GRPE_SYNJA (Protein grpE OS=Synechococcus sp. (strain JA-3-3Ab) GN=grpE PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.415e-21 Identity = 60/173 (34.68%), Postives = 97/173 (56.07%), Query Frame = 1 Query: 367 METLQSYKEALASNDDTKAAEIEALLKSFEDEKI------------DLERKVVNLSEELSAERARI-------LRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEXINNSYQSIYKQLVEILXSLGVVPVETVGNPFDPLLHEAIMREDS 828 M T +Y E D +A + +L+ E E DL + L +EL R ++ +R+ ADF+N+R+RT++E+ + + + +L V+D+FERA+ Q+K++T+ E ++NSYQS+Y+ LVE L +GV +++VG PFDP LHEAI R+ S Sbjct: 1 MPTEDAYPELQEEEIDVEAELEKLILEDREAEASTSSGEASAEASQDLSETLKQLQQELEITRQQLKEKEESYIRLYADFENYRRRTQREKEEFSQKERQKFVLEILPVVDSFERAQQQLKLETDREREVHNSYQSVYRLLVECLKKMGVSRMKSVGQPFDPNLHEAIARQPS 173
BLAST of FC876499 vs. ExPASy Swiss-Prot
Match: GRPE_SYNSC (Protein grpE OS=Synechococcus sp. (strain CC9605) GN=grpE PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.152e-21 Identity = 50/124 (40.32%), Postives = 78/124 (62.90%), Query Frame = 1 Query: 457 DEKIDLERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEXINNSYQSIYKQLVEILXSLGVVPVETVGNPFDPLLHEAIMREDS 828 D LE+++ L +E ++ +RI+ADFDNFRKR +++ + + +L V+DNFERA+ Q+ + E + ++ SYQ +YKQLVE+L GV ++ VG FDP LHEA++RE+S Sbjct: 45 DRMQQLEQELSALKQEHDTLNSQYMRIAADFDNFRKRQSRDQDDMRKQLVCSTLTEILPVVDNFERARQQLNPEGEEAQALHRSYQGLYKQLVEVLKQQGVARMDVVGQEFDPNLHEAVLREES 168
BLAST of FC876499 vs. ExPASy Swiss-Prot
Match: GRPE_SYNJB (Protein grpE OS=Synechococcus sp. GN=grpE PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.152e-21 Identity = 48/119 (40.34%), Postives = 82/119 (68.91%), Query Frame = 1 Query: 472 LERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEXINNSYQSIYKQLVEILXSLGVVPVETVGNPFDPLLHEAIMREDS 828 L+ ++ + ++L + LR+ ADF+N+R+RT++E+ + + + +L V+D+FERA+ Q+K++T+ E ++NSYQS+Y+ LVE L +GV +++VG PFDP LHEAI R+ S Sbjct: 55 LQHELEVVRQQLKEKEDAYLRLYADFENYRRRTQREKEEFSQKERQKFVLEILPVVDSFERAQQQLKLETDRERELHNSYQSVYRLLVECLKKMGVSRMKSVGQPFDPNLHEAIARQPS 173
BLAST of FC876499 vs. ExPASy Swiss-Prot
Match: GRPE_ANOFW (Protein grpE OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=grpE PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.498e-18 Identity = 52/155 (33.55%), Postives = 86/155 (55.48%), Query Frame = 1 Query: 370 ETLQSYKEAL---ASNDDTKAAEIEALLKSFEDEKIDLERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEXINNSYQSIYKQLVEILXSLGVVPVETVGNPFDPLLHEAIMRED 825 ETL+ +++A A + + E EA + +DE K+ L +L+ R LR+ ADFDN+R+R + + ++ LL +LDNFERA Q++V+ E + + + +Y+ L+E L GV +E+VG PFDP +H+A+M+ D Sbjct: 17 ETLEQHEDAQSEQAPEEQVEQVENEATQQEEKDELTVAYEKIAQLEAKLAETENRFLRLHADFDNYRRRVRLDMEAAEKYRAQSLVSDLLPILDNFERA-LQVQVEDEKAKLLLQGMEMVYRSLIEALKKEGVEAIESVGKPFDPHVHQAVMQVD 170
BLAST of FC876499 vs. ExPASy Swiss-Prot
Match: GRPE_CLOPH (Protein grpE OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=grpE PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.607e-17 Identity = 53/147 (36.05%), Postives = 79/147 (53.74%), Query Frame = 1 Query: 385 YKEALASNDDTKAAEIEALLKSFEDEKIDLERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEXINNSYQSIYKQLVEILXSLGVVPVETVGNPFDPLLHEAIMRED 825 Y+E AS D +K KSF +K ++K E++ R++R A+F+NFRKRTEKE+ + +++ER+L V+DNFER + V+ E + + IYKQLV L + GV +E G FDP H A+M + Sbjct: 56 YEEDTASEDGSKEK------KSFFKKKEKKDKK----DEKIDELTDRLMRNMAEFENFRKRTEKEKTQMFEVGAKDIIERILPVIDNFERGLAAVSVE-EKDSAFVQGIEKIYKQLVTTLEAAGVKQIEAAGKEFDPDFHNAVMHAE 191
BLAST of FC876499 vs. ExPASy Swiss-Prot
Match: GRPE_BACTR (Protein grpE OS=Bacillus thermoglucosidasius GN=grpE PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 8.035e-17 Identity = 61/179 (34.08%), Postives = 94/179 (52.51%), Query Frame = 1 Query: 343 EEAPTSFIMETLQS--YKEALASNDDTKAAEIEALLKSFEDEKIDLERKVVNLSEELSAERARI--------------LRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEXINNSYQSIYKQLVEILXSLGVVPVETVGNPFDPLLHEAIMR-EDS 828 +E+P + E L+ ++E A + K E + +DE D E+ +EEL+A A+I LR+ ADF+NFR+RT +E + ++ LL VLDNFERA +IK + E + I + +Y+ +++ L GV +E VG PFDP LH+A+M+ EDS Sbjct: 16 QESPNAERQEELKENEHQEKNAPEEQEKVREENGRQDAQKDEIGDPEKAKEEQNEELAAANAKIAELEAKIKEMENRYLRLYADFENFRRRTRREMEAAEKYRAQSLVSDLLPVLDNFERA-LKIKAEDEQAKSILQGMEMVYRSVLDALKKEGVEAIEAVGKPFDPHLHQAVMQVEDS 193
BLAST of FC876499 vs. ExPASy Swiss-Prot
Match: GRPE_GEOTN (Protein grpE OS=Geobacillus thermodenitrificans (strain NG80-2) GN=grpE PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.053e-16 Identity = 52/146 (35.62%), Postives = 79/146 (54.11%), Query Frame = 1 Query: 394 ALASNDDTKAAEIEALLKSFEDEKIDLERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEE--XINNSYQSIYKQLVEILXSLGVVPVETVGNPFDPLLHEAIMRED 825 A + D + +EA +E + +V L E+L+ R LR+ ADF+NFR+R +E + + LL VLDNFERA +K++TE E+ I + +Y+ L++ L GV +E VG PFDP LH+A+M+ D Sbjct: 51 ASTTADPAEQTSVEA------EELAKAKAQVAELEEKLAEMEKRYLRLYADFENFRRRARQEMEAAEKYRAQSLASDLLPVLDNFERA---LKIETENEQAKSILQGVEMVYRSLLDALRKEGVEVIEAVGKPFDPHLHQAVMQTD 187 The following BLAST results are available for this feature:
BLAST of FC876499 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 85
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876499 ID=FC876499; Name=FC876499; organism=Citrus clementina; type=EST; length=829bpback to top |