FC876529

Overview
NameFC876529
Unique NameFC876529
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length811
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876529 vs. ExPASy Swiss-Prot
Match: ADH2_BACST (Alcohol dehydrogenase OS=Bacillus stearothermophilus GN=adh PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.155e-13
Identity = 68/226 (30.09%), Postives = 99/226 (43.81%), Query Frame = 3
Query:  138 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEV-------------YGDINEKALDHPKRN------GSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKEN 758
            MKA V  E+  +  + +    VE P L E +VL+K+ A  +   D     G +      LP IPG++  G+V +V   VK  KVGD V             Y    ++ L   + N      G  AEY     + +A  P NL  VE A +  A  T Y+ L+ S    G+ + +  G GG+G + +Q AK   G              L + LGAD+AI+  KE+
Sbjct:    1 MKAAVVNEFKKALEIKE----VERPKLEEGEVLVKIEACGVCHTDLHAAHGDWPIKPK-LPLIPGHEGVGIVVEVAKGVKSIKVGDRVGIPWLYSACGECEYCLTGQETLCPHQLNGGYSVDGGYAEYCKAPADYVAKIPDNLDPVEVAPILCAGVTTYKALKVSGARPGEWVAIY-GIGGLGHIALQYAK-AMGLNVVAVDISDEKSKLAKDLGADIAINGLKED 219          
BLAST of FC876529 vs. ExPASy Swiss-Prot
Match: ADH1_BACST (Alcohol dehydrogenase OS=Bacillus stearothermophilus GN=adhT PE=1 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 5.155e-13
Identity = 64/221 (28.96%), Postives = 99/221 (44.80%), Query Frame = 3
Query:  138 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEV-------------YGDINEKALDHPKRN------GSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAID 743
            MKA V +++     V +    VE P +   +VL+++ A  +   D     G +      LP IPG++  GV+E+VG  V   KVGD V             Y    ++ L   ++N      G  AEY     + +   P NLSF EAA +  A  T Y+ L+ +    G+ + +  G GG+G + +Q AK   G            L+L + LGADL ++
Sbjct:    1 MKAAVVEQFKKPLQVKE----VEKPKISYGEVLVRIKACGVCHTDLHAAHGDWPVKPK-LPLIPGHEGVGVIEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCERQQNAGYSVDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTGAKPGEWVAIY-GIGGLGHVAVQYAK-AMGLNVVAVDLGDEKLELAKQLGADLVVN 214          
BLAST of FC876529 vs. ExPASy Swiss-Prot
Match: QOR_LEIAM (Probable quinone oxidoreductase OS=Leishmania amazonensis PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.733e-13
Identity = 72/227 (31.72%), Postives = 101/227 (44.49%), Query Frame = 3
Query:  156 KEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEV----YGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKENI-----EDLPEKFDVVFDAVG 806
            K++ +S SV++     EVP   E  V + V  A +N  D     G++     P P   G++ AG V ++G+ V   KVGD V    YG   E  LD P           V E    LKP      E + LP++  TA   L E      G   LV   AGG G + +QL KHV+G             + L+S+G D  I+Y  E++     E  P+  DVV++ VG
Sbjct:   17 KDFRSSTSVVEAHLPEEVP---EGMVRVSVKYAGVNASDLNFTNGSYFKNVQP-PFDCGFEAAGTVVQIGAGVANVKVGDHVVLMQYGCFAE-FLDAPAER-----CIPVPE----LKP------EYSVLPVSALTAAVALGEVGRVKKGDVALVTAAAGGTGQIAVQLLKHVYGCTVIGTCSSEEKAEFLKSIGCDHVINYKTESLDGRLHELCPKGVDVVYECVG 223          
BLAST of FC876529 vs. ExPASy Swiss-Prot
Match: PKS44_DICDI (Probable polyketide synthase 44 OS=Dictyostelium discoideum GN=pks44 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.500e-12
Identity = 50/165 (30.30%), Postives = 91/165 (55.15%), Query Frame = 3
Query:  183 LKFETNVEVPSLREDQVLIKVVAAALNPID---FKRMLGAFSATDSPLPTIP--GYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERS---AFSAGKSILVLGGAGGVGTMVIQLAK 653
            L+++   +  +L+E+++ ++VVA  +N  D   F+ ++    A      + P  G++ +G+V ++GS+VKKFKVGD V G I+ K         S + +    ++   LKP N+SFVEAAS+P+   T++  L  S   +    +S+L+   +GG+G   + + K
Sbjct: 1885 LEYQLEAKQSNLKENEIEVQVVATGINFKDSLIFRNLVPPVLANHEGDFSKPEFGFECSGIVSRIGSKVKKFKVGDSVLG-ISWK---------STSSHAINYQDAFVLKPDNISFVEAASIPIVYCTSFYSLFYSGNLSIKNNESVLIHQASGGIGLACLNILK 2039          
BLAST of FC876529 vs. ExPASy Swiss-Prot
Match: QORX_HUMAN (Quinone oxidoreductase PIG3 OS=Homo sapiens GN=TP53I3 PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.341e-12
Identity = 61/210 (29.05%), Postives = 94/210 (44.76%), Query Frame = 3
Query:  201 VEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK-KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLER-SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKENIEDLPEKF------DVVFDAVG 806
            V  PS  E +VL+KV A+ALN  D  +  G +         I G + +G V ++G   +  +K+GD     +           G  A+Y  V E LL   P+ L+  +AA++P A  TA++ L       AG  +L+  G  GVGT  IQL + + G            L +   LGA    +Y KE+  +   KF      +++ D +G
Sbjct:   20 VAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPPPGA-SNILGLEASGHVAELGPGCQGHWKIGDTAMALLP---------GGGQAQYVTVPEGLLMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTR-MAGAIPLVTAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIG 218          
BLAST of FC876529 vs. ExPASy Swiss-Prot
Match: VAT1L_HUMAN (Synaptic vesicle membrane protein VAT-1 homolog-like OS=Homo sapiens GN=VAT1L PE=1 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 4.364e-12
Identity = 56/178 (31.46%), Postives = 84/178 (47.19%), Query Frame = 3
Query:  135 KMKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSP--LPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHV 659
            +M+A V   +G    +  F     +P  ++ ++ I+V A  LN ID     G     D+P   P +PG++ +G+VE +G  VK +++GD V   +N  A          AE        +   P ++SF EAA+ P+   TAY  L E +    G S+LV    GGVG  V QL   V
Sbjct:   41 EMRAVVLAGFGGLNKLRLFRK--AMPEPQDGELKIRVKACGLNFIDLMVRQGNI---DNPPKTPLVPGFECSGIVEALGDSVKGYEIGDRVMAFVNYNA---------WAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTV 204          
BLAST of FC876529 vs. ExPASy Swiss-Prot
Match: PKS2_DICDI (Probable polyketide synthase 2 OS=Dictyostelium discoideum GN=pks2 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.364e-12
Identity = 60/220 (27.27%), Postives = 101/220 (45.91%), Query Frame = 3
Query:   18 TSLGRLYSFTFLFINNIACIEVTASK*NPINLLRXXXXXKMKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPID---FKRMLGAFSATDSPLPTIP--GYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAF---SAGKSILVLGGAGGVGTMVIQLAK 653
            T+  + Y   F+F  +    E    + N    L+          +Y + G +   L+++       + E  + +KV+A+ +N  D   ++R++   +   +     P  GY+ +G+V +VG  V KFKVGDEV G                  +  +E+    LKPKNL+ VEAAS+P+   T+Y  L  + +      +S+L+ GG GG+G   I L K
Sbjct: 1786 TNPNKHYQREFIFRGDKVYYERVTQETNLKLKLKSTSYISEPTQLYAKLGQN---LQYQLKPFENKIPEGFIEVKVLASGINFKDNLVYRRLVPNEAVNHTGNSNDPEFGYECSGIVSRVGDGVTKFKVGDEVVG----------LGFNCTGSFVTLEQFRFVLKPKNLTHVEAASIPVVYLTSYYSLFVAGYLSIEKKESVLIHGGTGGIGLACINLLK 1992          
BLAST of FC876529 vs. ExPASy Swiss-Prot
Match: CIPB_EMENI (Zinc-binding alcohol dehydrogenase domain-containing protein cipB OS=Emericella nidulans GN=cipB PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.364e-12
Identity = 58/183 (31.69%), Postives = 83/183 (45.36%), Query Frame = 3
Query:  204 EVPSL--REDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAIDY 746
            E PS    E+++L+K  A A+NP+D      A+   +   PTI G DVAG V +VG  V +F+ GD V G     A    + N   A YT ++ N+ +  P  +S+ +AA LPL   TA  GL +     G + + LG A G         K+                D ++ LGA    DY
Sbjct:   24 EAPSYTPEENEILVKNHAVAINPVDGSLQSKAWWPMN--YPTILGQDVAGEVVQVGPNVARFQPGDRVVGHAVGMATKRLQDNAFQA-YTILQTNMASQLPSEISYEDAAVLPLGLSTAASGLFQD--DVGSNAIQLGVAAGYEVFTTASPKN---------------FDYVKELGASQVFDY 186          
BLAST of FC876529 vs. ExPASy Swiss-Prot
Match: ADHA_RHIME (Alcohol dehydrogenase OS=Rhizobium meliloti GN=adhA PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.700e-12
Identity = 66/221 (29.86%), Postives = 93/221 (42.08%), Query Frame = 3
Query:  138 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALD--HPKR-----------------NGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAID 743
            M A V +E+G    +      V VP     QVLIK  A  +   D     G +    +P P IPG++  G V K+G++V + K GD V       A     P R                 +G+ A+Y   + + +   P  L F  AA +  A  T Y+GL+ +    G+ +LV  G GG+G M +Q AK   G            L L   LGADL +D
Sbjct:    3 MTAAVVREFGKPLVI----EEVPVPQPGPGQVLIKYEATGVCHTDLHAAKGDWPVRPNP-PFIPGHEGVGYVAKLGAEVTRLKEGDRVGVPWLHTACGCCTPCRTGWETLCGSQQNTGYSVDGTFAQYGLADPDFVGRLPARLEFGPAAPVLCAGVTVYKGLKETEVRPGEWVLV-SGIGGLGHMAVQYAK-AMGMHVAAADIFPDKLALAEKLGADLVVD 216          
BLAST of FC876529 vs. ExPASy Swiss-Prot
Match: ADH2_CANAL (Alcohol dehydrogenase 2 OS=Candida albicans GN=ADH2 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.700e-12
Identity = 59/224 (26.34%), Postives = 95/224 (42.41%), Query Frame = 3
Query:  171 SQSVLKFETN--------VEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDIN---------------------EKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKE 755
            +Q  + FETN        + VP  + +++LI V  + +   D     G +    + LP + G++ AGVV  +G  VK +KVGD  Y  +                      E  L     +GS  +Y   +    A  P        A +  A  T Y+ L+ +   AG+ + + G AGG+G++ +Q AK   G             + ++SLGA+  ID+TKE
Sbjct:    6 TQKAVIFETNGGKLEYKDIPVPKPKANELLINVKYSGVCHTDLHAWKGDWPLA-TKLPLVGGHEGAGVVVALGENVKGWKVGD--YAGVKWLNGSCLNCEYCQSGAEPNCAEADLSGYTHDGSFQQYATADAVQAARIPAGTDLANVAPILCAGVTVYKALKTAELEAGQWVAISGAAGGLGSLAVQYAK-AMGYRVLAIDGGEDKGEFVKSLGAETFIDFTKE 225          
The following BLAST results are available for this feature:
BLAST of FC876529 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 68
Match NameE-valueIdentityDescription
ADH2_BACST5.155e-1330.09Alcohol dehydrogenase OS=Bacillus stearothermophil... [more]
ADH1_BACST5.155e-1328.96Alcohol dehydrogenase OS=Bacillus stearothermophil... [more]
QOR_LEIAM6.733e-1331.72Probable quinone oxidoreductase OS=Leishmania amaz... [more]
PKS44_DICDI1.500e-1230.30Probable polyketide synthase 44 OS=Dictyostelium d... [more]
QORX_HUMAN3.341e-1229.05Quinone oxidoreductase PIG3 OS=Homo sapiens GN=TP5... [more]
VAT1L_HUMAN4.364e-1231.46Synaptic vesicle membrane protein VAT-1 homolog-li... [more]
PKS2_DICDI4.364e-1227.27Probable polyketide synthase 2 OS=Dictyostelium di... [more]
CIPB_EMENI4.364e-1231.69Zinc-binding alcohol dehydrogenase domain-containi... [more]
ADHA_RHIME5.700e-1229.86Alcohol dehydrogenase OS=Rhizobium meliloti GN=adh... [more]
ADH2_CANAL5.700e-1226.34Alcohol dehydrogenase 2 OS=Candida albicans GN=ADH... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN2CH02RM1 EHR Citrus clementina cDNA clone KN0AAN2CH02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876529 ID=FC876529; Name=FC876529; organism=Citrus clementina; type=EST; length=811bp
GCACGAGGACTTACCAAACATCTTTAGGCAGGCTTTACTCCTTCACTTTC
CTCTTCATAAATAACATTGCATGTATAGAAGTCACAGCCAGCAAATAAAA
CCCAATTAATTTATTAAGATAAATAATCATCTGAAAAATGAAGGCTTGGG
TTTACAAAGAATATGGAAACTCTCAAAGTGTTTTGAAGTTTGAAACAAAT
GTTGAAGTTCCAAGTTTGAGGGAAGATCAAGTGCTGATCAAGGTTGTAGC
CGCGGCTCTTAATCCAATTGATTTCAAGAGGATGCTTGGGGCATTCAGCG
CAACTGACTCTCCTTTGCCTACGATTCCTGGGTATGATGTTGCGGGTGTC
GTGGAGAAAGTGGGAAGCCAAGTAAAGAAGTTTAAGGTAGGAGATGAAGT
TTATGGAGATATAAATGAGAAAGCATTGGATCATCCTAAACGAAATGGCT
CCTTAGCTGAGTACACTGCTGTTGAAGAGAATCTATTGGCTCTCAAGCCC
AAAAACCTGAGTTTTGTTGAGGCTGCAAGCCTTCCCCTTGCCACTGAGAC
TGCCTATGAAGGTCTTGAACGTTCTGCCTTTTCCGCCGGTAAATCTATTC
TTGTTTTAGGTGGAGCTGGTGGAGTTGGCACCATGGTGATTCAGCTAGCT
AAGCATGTCTTTGGTGCATCTAAAGTAGCAGCTACCTCTAGCACTGCAAA
GCTGGACTTGTTAAGGAGCTTGGGTGCTGATTTGGCTATTGATTACACCA
AGGAAAACATTGAAGACCTGCCTGAGAAATTTGATGTAGTGTTTGATGCA
GTTGGGCAATG
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